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| Title | Published in | Access level | OA Policy | Year | Views | Downloads | |
|---|---|---|---|---|---|---|---|
| Extensively drug-resistant Haemophilus influenzae isolated in Geneva, Switzerland | European journal of clinical microbiology & infectious diseases |  | 2025 | 20 | 15 | ||
| Microbiota of healthy dental pulps under the omics loupe | International journal of molecular sciences | | 2025 | 34 | 29 | ||
| Horizontal transmission of a multidrug-resistant IncM1 plasmid harbouring blaOXA-48 and blaCTX-M-14b among patient microbiotas | Journal of antimicrobial chemotherapy | | 2025 | 29 | 17 | ||
| A framework towards implementation of sequencing for antimicrobial-resistant and other health-care-associated pathogens | The Lancet. Infectious diseases |  | 2025 | 75 | 0 | ||
| Secular trends of bloodstream infections in hemodialysis patients : insights from a longitudinal Swiss study | Antimicrobial resistance and infection control | | 2025 | 17 | 14 | ||
| Role of viral coinfection in post-pandemic invasive Group A streptococcal infections in adults, a nation-wide cohort study (iGASWISS) | European journal of clinical microbiology & infectious diseases | | 2025 | 16 | 8 | ||
| Myiasis in the intensive care unit : report from Switzerland and review of worldwide cases | Swiss medical weekly | | 2025 | 28 | 67 | ||
| Next-Generation Sequencing Techniques to Diagnose Culture-Negative Subacute Native Aortic Endocarditis | Emerging infectious diseases | | 2025 | 16 | 23 | ||
| Characterisation of a novel AmpC beta-lactamase, DHA-33, resistant to inhibition by cloxacillin | Diagnostic microbiology and infectious disease | | 2024 | 55 | 92 | ||
| Evaluation of PhenoMATRIX and PhenoMATRIX PLUS for the screening of MRSA from nasal and inguinal/perineal swabs using chromogenic media | Journal of clinical microbiology | | 2024 | 38 | 97 | ||
| In-vitro activity of the novel β-lactam/β-lactamase inhibitor combinations and cefiderocol against carbapenem-resistant Pseudomonas spp. clinical isolates collected in Switzerland in 2022 | European journal of clinical microbiology & infectious diseases | | 2024 | 54 | 88 | ||
| Significance of colonization by antibiotic-resistant organisms prior to congenital heart disease surgery in children from low- to middle-income countries sent by non-governmental organizations to Switzerland | Infection | | 2024 | 82 | 67 | ||
| Early reduction in gut microbiota diversity in critically ill patients is associated with mortality | Annals of intensive care | | 2024 | 34 | 47 | ||
| Current state and perspective of implementation of clinical metagenomics : Geneva ICCMg meeting report | Trends in microbiology | | 2024 | 62 | 0 | ||
| Molecular analysis of metallo-beta-lactamase-producing Pseudomonas aeruginosa in Switzerland 2022–2023 | European journal of clinical microbiology & infectious diseases | | 2024 | 50 | 74 | ||
| Conference report : the first bacterial genome sequencing pan-European network conference | Microbes and infection | | 2024 | 86 | 97 | ||
| Simplified Spectrum Score (S3) app for pathogen-agnostic antimicrobial drug spectrum ranking to assess for antimicrobial de-escalation events | Scientific reports | | 2024 | 50 | 21 | ||
| Potent in-vitro activity of sulbactam-durlobactam against NDM-producing Escherichia coli including cefiderocol and aztreonam-avibactam-resistant isolates | Clinical microbiology and infection | | 2024 | 91 | 1 | ||
| Gut microbiota associations with chronic kidney disease : insights into nutritional and inflammatory parameters | Frontiers in microbiology | | 2024 | 119 | 115 | ||
| Case report : Chronic Candida albicans meningitis : a rare entity diagnosed by metagenomic next-generation sequencing | Frontiers in cellular and infection microbiology | | 2024 | 49 | 69 | ||
| Sphingobacterium multivorum cellulitis : case report and mini-review | New microbes and new infections | | 2024 | 58 | 113 | ||
| Controlling the hospital aquatic reservoir of multidrug-resistant organisms : a cross-sectional study followed by a nested randomized trial of sink decontamination | Clinical microbiology and infection | | 2024 | 161 | 114 | ||
| Acute bacterial meningitis due to Neisseria meningitidis serotype B missed by a multiplexed PCR panel | Clinical microbiology and infection | | 2023 | 82 | 0 | ||
| Could daily changes in respiratory microbiota help predicting early Staphylococcus aureus ventilator-associated pneumonia ? | Intensive care medicine experimental | | 2023 | 123 | 38 | ||
| Postpartum septic arthritis of pubic symphysis due to Sneathia sanguinegens, Sneathia vaginalis, and Mageeibacillus indolicus : Contribution of clinicalmetagenomics | New microbes and new infections | | 2023 | 242 | 106 | ||
| Biology and Regulation of Staphylococcal Biofilm | International journal of molecular sciences | | 2023 | 85 | 25 | ||
| Draft Genome Sequence of a Mixed-Serogroup W/Y Invasive Neisseria meningitidis Strain | Microbiology resource announcements | | 2023 | 88 | 75 | ||
| Clinical Aureobasidium Isolates Are More Fungicide Sensitive than Many Agricultural Isolates | Microbiology spectrum | | 2023 | 92 | 68 | ||
| Diagnostic test accuracy of an automated device for the MALDI target preparation for microbial identification | European journal of clinical microbiology & infectious diseases | | 2023 | 81 | 37 | ||
| Metagenomics for the microbiological diagnosis of hospital-acquired pneumonia and ventilator-associated pneumonia (HAP/VAP) in intensive care unit (ICU): a proof-of-concept study | Respiratory research | | 2023 | 93 | 75 | ||
| The Swiss Pathogen Surveillance Platform – towards a nation-wide One Health data exchange platform for bacterial, viral and fungal genomics and associated metadata | Microbial genomics | | 2023 | 118 | 58 | ||
| Impact of air pollution on respiratory microbiome : a narrative review | Intensive and critical care nursing | | 2023 | 95 | 0 | ||
| IVDR : analysis of the social, economic, and practical consequences of the application of an ordinance of the in vitro diagnostic ordinance in Switzerland | Diagnostics | | 2023 | 73 | 57 | ||
| Mycoplasma genitalium Endocarditis in Prosthetic Aortic Valve | Emerging infectious diseases | | 2023 | 89 | 53 | ||
| Targeted mupirocin-based decolonization for Staphylococcus aureus carriers and the subsequent risk of mupirocin resistance in haemodialysis patients - a longitudinal study over 20 years | Journal of hospital infection | | 2023 | 161 | 89 | ||
| Oral and intestinal dysbiosis in Parkinson's disease | Revue neurologique | | 2023 | 149 | 54 | ||
| A metagenomics method for the quantitative detection of bacterial pathogens causing hospital-associated and ventilator-associated pneumonia | Microbiology spectrum | | 2023 | 80 | 53 | ||
| Quality of MALDI-TOF mass spectra in routine diagnostics: results from an international external quality assessment including 36 laboratories from 12 countries using 47 challenging bacterial strains | Clinical microbiology and infection | | 2023 | 128 | 178 | ||
| Legionnaires' disease in Switzerland: rationale and study protocol of a prospective national case-control and molecular source attribution study (SwissLEGIO) | Infection | | 2023 | 69 | 41 | ||
| Association between faecal microbiota and nutritional parameters in chronic kidney disease and healthy patients | 45th ESPEN Congress on Clinical Nutrition & Metabolism | | 2023 | 94 | 50 | ||
| The central and biodynamic role of gut microbiota in critically ill patients | Critical care | | 2022 | 148 | 151 | ||
| Total Laboratory Automation for Rapid Detection and Identification of Microorganisms and Their Antimicrobial Resistance Profiles | Frontiers in cellular and infection microbiology | | 2022 | 72 | 101 | ||
| Performance of the HiberGene Group B Streptococcus kit, a loop-mediated isothermal amplification–based assay for GBS screening during pregnancy | European journal of clinical microbiology & infectious diseases | | 2022 | 89 | 133 | ||
| Retrospective data analysis for definition of multidrug resistance in gram-negative bacteria - a consensus proposal | Swiss Medical Weekly | | 2022 | 162 | 52 | ||
| The human gut mycobiome and the specific role of Candida albicans: where do we stand, as clinicians? | Clinical Microbiology and Infection | | 2022 | 311 | 690 | ||
| Contribution of Clinical Metagenomics to the Diagnosis of Bone and Joint Infections | Frontiers in microbiology | | 2022 | 114 | 87 | ||
| Effect of bacterial DNA enrichment on detection and quantification of bacteria in an infected tissue model by metagenomic next-generation sequencing | ISME communications | | 2022 | 84 | 139 | ||
| Changes in the gut bacterial communities in colon cancer surgery patients: an observational study | Gut pathogens | | 2022 | 221 | 101 | ||
| Fully Automated EUCAST Rapid Antimicrobial Susceptibility Testing (RAST) from Positive Blood Cultures: Diagnostic Accuracy and Implementation | Journal of clinical microbiology | | 2022 | 93 | 115 | ||
| An interventional quasi-experimental study to evaluate the impact of a rapid screening strategy in improving control of nosocomial extended-spectrum beta-lactamase-producing Enterobacterales and carbapenemase-producing organisms in critically ill patients | Critical care | | 2022 | 316 | 82 | ||
| Nontuberculous Mycobacteria under Scrutiny in the Geneva Area (2015–2020) | Respiration | | 2022 | 99 | 1 | ||
| Bacteremia Detection in Second or Subsequent Blood Cultures Among Hospitalized Patients in a Tertiary Care Hospital | JAMA Network Open | | 2022 | 229 | 62 | ||
| Agrobacterium species bacteraemia, Switzerland, 2008 to 2019: a molecular epidemiological study | Antimicrobial resistance and infection control | | 2022 | 87 | 55 | ||
| Synthèse du 7ème symposium « Feeding the Microbiota »: prébiotiques et probiotiques | Revue médicale suisse | | 2022 | 125 | 59 | ||
| Caution when using 1,3, β-D-glucan in the CSF as a biomarker of Candida albicans meningitis | International journal of infectious diseases | | 2022 | 89 | 108 | ||
| Mapping of etiologies of computed tomography-proven acute colitis: a prospective cohort study | Scientific reports | | 2022 | 180 | 42 | ||
| Missed pertussis diagnosis during co-infection with Bordetella holmesii | European journal of clinical microbiology & infectious diseases | | 2022 | 110 | 0 | ||
| Changes over 6 months of gut microbiota and nutritional parameters in patients with alcoholic liver disease: a prospective study | Open access journal of biomedical science | | 2022 | 188 | 178 | ||
| Oral dysbiosis and inflammation in Parkinson's disease | Journal of Parkinson's Disease | | 2021 | 359 | 858 | ||
| Performances of automated digital imaging of Gram-stained slides with on-screen reading against manual microscopy | European Journal of Clinical Microbiology & Infectious Diseases | | 2021 | 234 | 155 | ||
| Distribution of pathogens and antimicrobial resistance in bacteraemia according to hospitalization duration: a nationwide surveillance study in Switzerland | Clinical Microbiology and Infection | | 2021 | 255 | 271 | ||
| Gut barrier and microbiota changes with glycine and branched‐chain amino acid supplementation in chronic haemodialysis patients | Journal of cachexia, sarcopenia and muscle | | 2021 | 401 | 263 | ||
| Temporal and regional incidence of carbapenemase-producing Enterobacterales, Switzerland, 2013 to 2018 | Euro Surveillance | | 2021 | 223 | 72 | ||
| Glycine increases fat‐free mass in malnourished haemodialysis patients: a randomized double‐blind crossover trial | Journal of cachexia, sarcopenia and muscle | | 2021 | 294 | 189 | ||
| Rapid diagnostic tests for infectious diseases in the emergency department | Clinical Microbiology and Infection | | 2021 | 251 | 424 | ||
| Outbreak of Pseudomonas aeruginosa producing VIM carbapenemase in an intensive care unit and its termination by implementation of waterless patient care | Critical Care | | 2021 | 367 | 255 | ||
| Staphylococcus aureus Transcriptome Data and Metabolic Modelling Investigate the Interplay of Ser/Thr Kinase PknB, Its Phosphatase Stp, the glmR/yvcK Regulon and the cdaA Operon for Metabolic Adaptation | Microorganisms | | 2021 | 217 | 87 | ||
| Accoutumance à la morphine : probiotiques à la rescousse | Revue médicale suisse | | 2021 | 410 | 533 | ||
| New insights into pneumonia in patients on prolonged mechanical ventilation: need for a new paradigm addressing dysbiosis | Jornal brasileiro de pneumologia | | 2021 | 165 | 105 | ||
| Time to Detection of Growth for Mycobacterium tuberculosis in a Low Incidence Area | Frontiers in cellular and infection microbiology | | 2021 | 191 | 115 | ||
| The Potential Role of Clinical Metagenomics in Infectious Diseases: Therapeutic Perspectives | Drugs | | 2021 | 215 | 121 | ||
| Case Report: About a Case of Hyperammonemia Syndrome Following Lung Transplantation: Could Metagenomic Next-Generation Sequencing Improve the Clinical Management? | Frontiers in Medicine | | 2021 | 202 | 219 | ||
| Mycobacterium chelonae infection identified by metagenomic next-generation sequencing as the probable cause of acute contained rupture of a biological composite graft—a case report | International journal of molecular sciences | | 2021 | 211 | 160 | ||
| Metataxonomic and Metabolic Impact of Fecal Microbiota Transplantation From Patients With Pancreatic Cancer Into Germ-Free Mice: A Pilot Study | Frontiers in cellular and infection microbiology | | 2021 | 339 | 120 | ||
| Effects of antibiotic duration on the intestinal microbiota and resistome: The PIRATE RESISTANCE project, a cohort study nested within a randomized trial | EBioMedicine | | 2021 | 243 | 158 | ||
| Hydrogen Peroxide Affects Growth of S. aureus Through Downregulation of Genes Involved in Pyrimidine Biosynthesis | Frontiers in immunology | | 2021 | 215 | 99 | ||
| Performance of Fully Automated Antimicrobial Disk Diffusion Susceptibility Testing Using Copan WASP Colibri Coupled to the Radian In-Line Carousel and Expert System | Journal of Clinical Microbiology | | 2021 | 229 | 213 | ||
| Vertical and horizontal dissemination of an incC plasmid harbouring rmtb 16s rRNA methylase gene, conferring resistance to plazomicin, among invasive ST258 and ST16 KPC-producing Klebsiella pneumoniae | Journal of global antimicrobial resistance | | 2021 | 254 | 192 | ||
| Trends of the Epidemiology of Candidemia in Switzerland: A 15-Year FUNGINOS Survey | Open forum infectious diseases | | 2021 | 100 | 65 | ||
| Synthèse du 6e symposium « Feeding the Microbiota » | Revue médicale suisse | | 2021 | 115 | 13 | ||
| Unexpectedly High False-Positive Rates for Haemophilus influenzae Using a Meningoencephalitis Syndromic PCR Panel in Two Tertiary Centers | Frontiers in Cellular and Infection Microbiology | | 2021 | 180 | 112 | ||
| Rapid high resolution melting assay to differentiate Streptococcus suis serotypes 2,1/2, 1, and 14 | MicrobiologyOpen | | 2020 | 302 | 165 | ||
| Phylogeographical Analysis Reveals the Historic Origin, Emergence, and Evolutionary Dynamics of Methicillin-Resistant Staphylococcus aureus ST228 | Frontiers in Microbiology | | 2020 | 270 | 86 | ||
| Symposium report: one health meets sequencing | Microbes and Infection | | 2020 | 308 | 184 | ||
| Digital microbiology | Clinical Microbiology and Infection | | 2020 | 240 | 183 | ||
| Impact of Total Laboratory Automation on Turnaround Times for Urine Cultures and Screening Specimens for MRSA, ESBL, and VRE Carriage: Retrospective Comparison With Manual Workflow | Frontiers in cellular and infection microbiology | | 2020 | 181 | 192 | ||
| Metagenomic Characterization of Gut Microbiota of Carriers of Extended-Spectrum Beta-Lactamase or Carbapenemase-Producing Enterobacteriaceae Following Treatment with Oral Antibiotics and Fecal Microbiota Transplantation: Results from a Multicenter Randomized Trial | Microorganisms | | 2020 | 440 | 241 | ||
| Second Periprosthetic Joint Infection Caused by Streptococcus dysgalactiae: How Genomic Sequencing Can Help Defining the Best Therapeutic Strategy | Frontiers in Medicine | | 2020 | 380 | 141 | ||
| Cutaneous ulcers revealing diphtheria: A re-emerging disease imported from Indian Ocean countries? | Annales de dermatologie et de vénéréologie | | 2020 | 235 | 0 | ||
| Septic shock caused by Capnocytophaga canis after a cat scratch | European Journal of Clinical Microbiology & Infectious Diseases | | 2020 | 199 | 0 | ||
| Rapid identification by MALDI-TOF/MS and antimicrobial disk diffusion susceptibility testing for positive blood cultures after a short incubation on the WASPLab | European Journal of Clinical Microbiology & Infectious Diseases | | 2020 | 321 | 2 | ||
| Niche specialization and spread of Staphylococcus capitis involved in neonatal sepsis | Nature Microbiology | | 2020 | 192 | 1 | ||
| Mapping of aetiologies of gastroenteritis: a systematic review and meta-analysis of pathogens identified using a multiplex screening array | Scandinavian Journal of Gastroenterology | | 2020 | 308 | 0 | ||
| The GLP-1R agonist liraglutide limits hepatic lipotoxicity and inflammatory response in mice fed a methionine-choline deficient diet | Translational Research | | 2020 | 555 | 275 | ||
| Estimating the association between antibiotic exposure and colonization with extended-spectrum β-lactamase-producing Gram-negative bacteria using machine learning methods: a multicentre, prospective cohort study | Clinical Microbiology and Infection | | 2020 | 442 | 0 | ||
| Discordant Clostridioides difficile diagnostic assay and treatment practice: a cross-sectional study in a tertiary care hospital, Geneva, Switzerland | BMJ Open | | 2020 | 286 | 99 | ||
| Comparative transcriptomic and functional assessments of linezolid-responsive small RNA genes in staphylococcus aureus | mSystems | | 2020 | 351 | 188 | ||
| Changes in microbiota profiles after prolonged frozen storage of stool suspensions | Frontiers in Cellular and Infection Microbiology | | 2020 | 391 | 217 | ||
| Performances and usefulness of Xpert MTB/RIF assay in low-incidence settings: not that bad? | European Journal of Clinical Microbiology & Infectious Diseases | | 2020 | 221 | 0 | ||
| Implementation of the WASPLab™ and first year achievements within a university hospital | European Journal of Clinical Microbiology & Infectious Diseases | | 2020 | 262 | 0 | ||
| Population structure, genetic diversity and pathotypes of Streptococcus suis isolated during the last 13 years from diseased pigs in Switzerland | Veterinary Research | | 2020 | 187 | 122 | ||
| Caractéristiques du microbiote chez le sujet âgé : Synthèse du 5e symposium « Feeding the Microbiota » | Revue médicale suisse | | 2020 | 117 | 48 | ||
| Comparison of the Copan WASPLab incorporating the BioRad expert system against the SIRscan 2000 automatic for routine antimicrobial disc diffusion susceptibility testing | Clinical Microbiology and Infection | | 2020 | 345 | 0 | ||
| Influenza-associated aspergillosis in critically-ill patients-a retrospective bicentric cohort study | European Journal of Clinical Microbiology & Infectious Diseases | | 2020 | 336 | 0 | ||
| From genotype to antibiotic susceptibility phenotype in the order Enterobacterales: a clinical perspective | Clinical Microbiology and Infection | | 2020 | 402 | 1 | ||
| Copan WASPLab automation significantly reduces incubation times and allows earlier culture readings | Clinical Microbiology and Infection | | 2019 | 292 | 1 | ||
| Microbiological diagnostics of bloodstream infections in Europe—an ESGBIES survey | Clinical Microbiology and Infection | | 2019 | 288 | 0 | ||
| Listeria monocytogenes infectious periaortitis: a case report from the infectious disease standpoint | BMC Infectious Diseases | | 2019 | 549 | 170 | ||
| Next-Generation Sequencing for the Diagnosis of Challenging Culture-Negative Endocarditis | Frontiers in Medicine | | 2019 | 383 | 231 | ||
| A molecular based diagnosis of positive blood culture in the context of viral haemorrhagic fever: proof of concept | Clinical Microbiology and Infection | | 2019 | 290 | 0 | ||
| Comparison of analytical performances of the Roche Cobas 6800 CT/NG assay with the Abbott m2000 Real Time CT/NG assay for detecting Chlamydia trachomatis and Neisseria gonorrhoeae | Journal of Medical Microbiology | | 2019 | 563 | 0 | ||
| Inactivation of farR causes high rhodomyrtone resistance and increased pathogenicity in staphylococcus aureus | Frontiers in Microbiology | | 2019 | 349 | 235 | ||
| Transplantation de microbiote fécal : état actuel et perspectives | Revue médicale suisse | | 2019 | 311 | 4 | ||
| High-throughput sequencing for the aetiologic identification of viral encephalitis, meningoencephalitis, and meningitis. A narrative review and clinical appraisal | Clinical Microbiology and Infection | | 2019 | 362 | 0 | ||
| Response to the letter to the editor: Comment on "Streptococcus anginosus Dental Implant-Related Osteomyelitis of the Jaws: An Insidious and Calamitous Entity" | Journal of Oral and Maxillofacial Surgery | | 2019 | 428 | 6 | ||
| Potential in vivo transfer of a blaCTX-M14-harbouring plasmid established by combining long- and short-read sequencing | Journal of Microbiological Methods | | 2019 | 326 | 318 | ||
| Diphtérie : nouvelle présentation clinique d'une ancienne maladie | Revue médicale suisse | | 2019 | 367 | 474 | ||
| Antimicrobial resistance trends in Escherichia coli, Klebsiella pneumoniae and Proteus mirabilis urinary isolates from Switzerland: retrospective analysis of data from a national surveillance network over an 8-year period (2009–2016) | Swiss Medical Weekly | | 2019 | 433 | 270 | ||
| Identification of respiratory microbiota markers in ventilator-associated pneumonia | Intensive Care Medicine | | 2019 | 370 | 167 | ||
| Targeting the gut microbiota to treat cachexia | Frontiers in Cellular and Infection Microbiology | | 2019 | 365 | 209 | ||
| Genomic epidemiology of Neisseria meningitidis serogroup W in Switzerland between 2010 and 2016 | Journal of Infection | | 2019 | 347 | 0 | ||
| Atypical presentation of Lemierre's syndrome: case report and literature review | BMC Infectious Diseases | | 2019 | 294 | 128 | ||
| Disrupting myelin-specific Th17 cell gut homing confers protection in an adoptive transfer experimental autoimmune encephalomyelitis | Cell Reports | | 2019 | 441 | 218 | ||
| Automated incubation and digital image analysis of chromogenic media using copan WASPLab enables rapid detection of vancomycin-resistant enterococcus | Frontiers in Cellular and Infection Microbiology | | 2019 | 285 | 125 | ||
| Messages from the third international conference on clinical metagenomics (ICCMg3) | Microbes and Infection | | 2019 | 290 | 0 | ||
| Rare Case of Community-Acquired Endocarditis Caused by Neisseria meningitidis Assessed by Clinical Metagenomics | Frontiers in Cardiovascular Medicine | | 2019 | 360 | 149 | ||
| The intestinal microbiota predisposes to traveler's diarrhea and to the carriage of multidrug-resistant enterobacteriaceae after traveling to tropical regions | Gut microbes | | 2019 | 301 | 185 | ||
| Massive diversity in whole-genome sequences of streptococcus suis strains from infected pigs in Switzerland | Microbiology resource announcements | | 2019 | 288 | 135 | ||
| Colistin Heteroresistance and Involvement of the PmrAB Regulatory System in Acinetobacter baumannii | Antimicrobial Agents and Chemotherapy | | 2018 | 332 | 349 | ||
| Genetic Adaptation of a Mevalonate Pathway Deficient Mutant in Staphylococcus aureus | Frontiers in Microbiology | | 2018 | 371 | 205 | ||
| Fluconazole non-susceptible breakthrough candidemia after prolonged low-dose prophylaxis: a prospective FUNGINOS study | Journal of Infection | | 2018 | 392 | 341 | ||
| Molecular characterization of fluoroquinolones, macrolides, and imipenem resistance in Haemophilus influenzae: analysis of the mutations in QRDRs and assessment of the extent of the AcrAB-TolC-mediated resistance | European Journal of Clinical Microbiology & Infectious Diseases | | 2018 | 397 | 0 | ||
| Accuracy of Sensititre YeastOne echinocandins epidemiological cut-off values for identification of FKS mutant Candida albicans and Candida glabrata: a ten year national survey of the Fungal Infection Network of Switzerland (FUNGINOS) | Clinical Microbiology and Infection | | 2018 | 324 | 202 | ||
| Improving the quality and workflow of bacterial genome sequencing and analysis: paving the way for a Switzerland-wide molecular epidemiological surveillance platform | Swiss Medical Weekly | | 2018 | 299 | 168 | ||
| Functional Gut Microbiota Remodeling Contributes to the Caloric Restriction-Induced Metabolic Improvements | Cell Metabolism | | 2018 | 607 | 369 | ||
| Emergence of ESBL-producing Escherichia coli ST131-C1-M27 clade colonizing patients in Europe | Journal of Antimicrobial Chemotherapy | | 2018 | 389 | 1 | ||
| A comparison of Sensititre™ Anaerobe MIC plate with ATB ANA® test for the routine susceptibility testing of common anaerobe pathogens | European Journal of Clinical Microbiology & Infectious Diseases | | 2018 | 348 | 0 | ||
| Microbiote et dénutrition : état des lieux | Revue médicale suisse | | 2018 | 310 | 0 | ||
| Fecal microbiota transplantation: a promising strategy in preventing the progression of non-alcoholic steatohepatitis and improving the anti-cancer immune response | Expert Opinion on Biological Therapy | | 2018 | 391 | 3 | ||
| Control of Infectious Diseases in the Era of European Clinical Microbiology Laboratory Consolidation: New Challenges and Opportunities for the Patient and for Public Health Surveillance | Frontiers in Medicine | | 2018 | 260 | 159 | ||
| Place des probiotiques dans la prévention d'un épisode inaugural d'infection à Clostridium difficile | Revue médicale suisse | | 2018 | 262 | 1 | ||
| Messages from the second International Conference on Clinical Metagenomics (ICCMg2) | Microbes and Infection | | 2018 | 328 | 0 | ||
| Transcriptional Modulation of Penicillin-Binding Protein 1b, Outer Membrane Protein P2 and Efflux Pump (AcrAB-TolC) during Heat Stress Is Correlated to Enhanced Bactericidal Action of Imipenem on Non-typeable Haemophilus influenzae | Frontiers in Microbiology | | 2018 | 340 | 143 | ||
| Epidemiology of subsequent bloodstream infections in the ICU | Critical Care | | 2018 | 385 | 196 | ||
| Azole Resistance of Environmental and Clinical Aspergillus fumigatus Isolates from Switzerland | Antimicrobial Agents and Chemotherapy | | 2018 | 414 | 183 | ||
| Disseminated emboli caused by a large vegetation in staphylococcus aureus endocarditis | American Journal of Clinical Microbiology and Antimicrobials | | 2018 | 461 | 78 | ||
| A Novel Mechanism of Inactivating Antibacterial Nitro Compounds in the Human Pathogen Staphylococcus aureus by Overexpression of a NADH-Dependent Flavin Nitroreductase | Antimicrobial Agents and Chemotherapy | | 2018 | 496 | 365 | ||
| Remarkable geographical variations between India and Europe in carriage of the staphylococcal surface protein-encoding sasX/sesI and in the population structure of methicillin-resistant Staphylococcus aureus belonging to clonal complex 8 | Clinical Microbiology and Infection | | 2018 | 424 | 104 | ||
| Root microbiota in primary and secondary apical periodontitis | Frontiers in Microbiology | | 2018 | 641 | 264 | ||
| A community outbreak of Legionnaires' disease in Geneva, Switzerland, June to September 2017 | Swiss Medical Weekly | | 2018 | 523 | 228 | ||
| Fast identification of dermatophytes by MALDI-TOF/MS using direct transfer of fungal cells on ground steel target plates | Mycoses | | 2018 | 355 | 1 | ||
| When Bacterial Culture Fails, Metagenomics Can Help: A Case of Chronic Hepatic Brucelloma Assessed by Next-Generation Sequencing | Frontiers in Microbiology | | 2018 | 514 | 188 | ||
| Infections à méningocoques en Suisse : changements épidémiologiques, cliniques et de prophylaxie | Revue médicale suisse | | 2018 | 313 | 0 | ||
| In vivo selection of a multidrug-resistant Aeromonas salmonicida during medicinal leech therapy | New Microbes and New Infections | | 2018 | 1,567 | 0 | ||
| Catheter-related infections: does the spectrum of microbial causes change over time? A nationwide surveillance study | BMJ Open | | 2018 | 318 | 151 | ||
| Association between oropharyngeal carriage of Kingella kingae and osteoarticular infection in young children: a case-control study | Canadian Medical Association Journal | | 2017 | 597 | 0 | ||
| Draft Genome Sequence of Kingella negevensis SW7208426, the First European Strain of K. negevensis Isolated from a Healthy Child in Switzerland | Genome Announcements | | 2017 | 619 | 0 | ||
| Catheter retention as a consequence rather than a cause of unfavorable outcome in candidemia | Intensive Care Medicine | | 2017 | 498 | 0 | ||
| Rapid identification of ST131 Escherichia coli by a novel multiplex real-time allelic discrimination assay | Journal of Microbiological Methods | | 2017 | 548 | 2 | ||
| The farming environment protects mice from allergen-induced skin contact hypersensitivity | Clinical and experimental allergy | | 2017 | 575 | 3 | ||
| Acute Septic Arthritis of the Knee Caused by Kingella kingae in a 5-Year-Old Cameroonian Boy | Frontiers in Pediatrics | | 2017 | 530 | 172 | ||
| Antimicrobial activity of ceftaroline against methicillin-resistant Staphylococcus aureus (MRSA) isolates collected in 2013-2014 at the Geneva University Hospitals | European Journal of Clinical Microbiology & Infectious Diseases | | 2017 | 676 | 235 | ||
| Isolation and characterization of Kingella negevensis sp. nov., a novel Kingella species detected in a healthy paediatric population | International Journal of Systematic and Evolutionary Microbiology | 2017 | 570 | 0 | |||
| Clinical Metagenomics for the Diagnostic of Hospital-acquired Infections: Promises and Hurdles | American Journal of Respiratory and Critical Care Medicine | | 2017 | 442 | 6 | ||
| Unexpected persistence of extended-spectrum β-lactamase-producing Enterobacteriaceae in the faecal microbiota of hospitalised patients treated with imipenem | International Journal of Antimicrobial Agents | | 2017 | 559 | 1 | ||
| Utilisation des tests diagnostiques microbiologiques à l'hôpital | Revue médicale suisse | | 2017 | 520 | 209 | ||
| Management and investigation of a Serratia marcescens outbreak in a neonatal unit in Switzerland - the role of hand hygiene and whole genome sequencing - R1, ARIC-D-17-00143 | Antimicrobial Resistance and Infection Control | | 2017 | 484 | 282 | ||
| Impact of Exposure of Methicillin-Resistant Staphylococcus aureus to Polyhexanide In Vitro and In Vivo | Antimicrobial Agents and Chemotherapy | | 2017 | 581 | 1 | ||
| The TIR Homologue Lies near Resistance Genes in Staphylococcus aureus, Coupling Modulation of Virulence and Antimicrobial Susceptibility | PLOS Pathogens | | 2017 | 577 | 236 | ||
| Clonal or not clonal? Investigating hospital outbreaks of KPC-producing Klebsiella pneumoniae with whole-genome sequencing | Clinical Microbiology and Infection | | 2017 | 531 | 1 | ||
| Rapid detection and ruling out of neonatal sepsis by PCR coupled with Electrospray Ionization Mass Spectrometry (PCR/ESI-MS) | Early Human Development | | 2017 | 557 | 2 | ||
| Clinical metagenomics of bone and joint infections: a proof of concept study | Scientific Reports | | 2017 | 612 | 318 | ||
| A transversal pilot study of oropharyngeal carriage of Kingella kingae in healthy children younger than 6 months | World Journal of Pediatrics | | 2017 | 476 | 0 | ||
| Microbiologic and Inflammatory Markers of Periodontitis are Different to those of Preterm Birth | Gynecology and Obstetrics | | 2017 | 439 | 226 | ||
| Development of in vitro resistance to chitosan is related to changes in cell envelope structure of Staphylococcus aureus | Carbohydrate Polymers | | 2017 | 416 | 0 | ||
| Establishing Genotype-to-Phenotype Relationships in Bacteria Causing Hospital-Acquired Pneumonia: A Prelude to the Application of Clinical Metagenomics | Antibiotics | | 2017 | 416 | 220 | ||
| Imipenem heteroresistance in nontypeable Haemophilus influenzae is linked to a combination of altered PBP3, slow drug influx and direct efflux regulation | Clinical Microbiology and Infection | | 2017 | 557 | 0 | ||
| Messages from the first International Conference on Clinical Metagenomics (ICCMg) | Microbes and Infection | | 2017 | 451 | 570 | ||
| Detection of Bacterial Pathogens from Broncho-Alveolar Lavage by Next-Generation Sequencing | International Journal of Molecular Sciences | | 2017 | 467 | 229 | ||
| Ecthyma Gangrenosum: Escherichia coli or Pseudomonas aeruginosa? | Frontiers in Microbiology | | 2017 | 603 | 223 | ||
| The detection of microbial DNA but not cultured bacteria is associated with increased mortality in patients with suspected sepsis-a prospective multi-centre European observational study | Clinical Microbiology and Infection | | 2017 | 521 | 0 | ||
| Microbial Communities of Conducting and Respiratory Zones of Lung-Transplanted Patients | Frontiers in microbiology | | 2016 | 589 | 535 | ||
| Staphylococcus aureus, phagocyte NADPH oxidase and chronic granulomatous disease | FEMS microbiology reviews | | 2016 | 604 | 3 | ||
| Low frequency of asymptomatic carriage of toxigenic Clostridium difficile in an acute care geriatric hospital: prospective cohort study in Switzerland | Antimicrobial Resistance and Infection Control | | 2016 | 562 | 191 | ||
| Predictors of Heavy Stethoscope Contamination Following a Physical Examination | Infection control and hospital epidemiology | | 2016 | 528 | 0 | ||
| Effect of Periodontal Therapy With Amoxicillin-Metronidazole on Pharyngeal Carriage of Penicillin- and Erythromycin-Resistant Viridans Streptococci | Journal of Periodontology | | 2016 | 496 | 0 | ||
| Determinants of Successful Methicillin-Resistant Staphylococcus aureus Decolonization | Infection control and hospital epidemiology | | 2016 | 524 | 0 | ||
| Daptomycin Tolerance in the Staphylococcus aureus pitA6 Mutant Is Due to Upregulation of the dlt Operon | Antimicrobial Agents and Chemotherapy | | 2016 | 434 | 0 | ||
| Randomized, placebo-controlled, double-blind clinical trial to evaluate the efficacy of polyhexanide for topical decolonization of MRSA carriers | The journal of antimicrobial chemotherapy | | 2016 | 543 | 265 | ||
| Standard Genotyping Overestimates Transmission of Mycobacterium tuberculosis among Immigrants in a Low-Incidence Country | Journal of Clinical Microbiology | | 2016 | 521 | 0 | ||
| Mass spectrometry methods for predicting antibiotic resistance | Proteomics - Clinical Applications | | 2016 | 453 | 0 | ||
| Reply to Planet et al | The Journal of Infectious Diseases | | 2016 | 411 | 0 | ||
| Clinical metagenomics for the management of hospital- and healthcare-acquired pneumonia | Future Microbiology | 2016 | 511 | 0 | |||
| The Swiss Society of Microbiology: Small Bugs, Big Questions and Cool Answers | Chimia | 2016 | 461 | 0 | |||
| Impact of Hypocaloric Hyperproteic Diet on Gut Microbiota in Overweight or Obese Patients with Nonalcoholic Fatty Liver Disease: A Pilot Study | Digestive diseases and sciences | | 2016 | 643 | 2 | ||
| Rapid molecular determination of methicillin resistance in staphylococcal bacteraemia improves early targeted antibiotic prescribing: a randomized clinical trial | Clinical microbiology and infection | | 2016 | 529 | 0 | ||
| Rose bengal uptake by E. faecalis and F. nucleatum and light-mediated antibacterial activity measured by flow cytometry | Journal of photochemistry and photobiology. B, Biology | | 2016 | 613 | 405 | ||
| Comparative Genomics of Community-Associated Methicillin-Resistant Staphylococcus aureus Shows the Emergence of Clone ST8-USA300 in Geneva, Switzerland | The Journal of infectious diseases | | 2016 | 602 | 253 | ||
| Decontamination of 16S rRNA gene amplicon sequence datasets based on bacterial load assessment by qPCR | BMC Microbiology | | 2016 | 500 | 201 | ||
| Identifying reservoirs of infections caused by kingella kingae: a case-control study of oropharyngeal carriage of k. kingae among healthy adults | Pediatric Infectious Disease Journal | | 2016 | 478 | 0 | ||
| Prevalence of extended-spectrum betalactamase producing–Enterobacteriaceae (ESBL-E) carriage on admission at Geneva University Hospitals (HUG) | 3rd International Conference on Prevention and Infection Control (ICPIC 2015) | 2015 | 16 | 0 | |||
| Performance of the 47-kilodalton membrane protein versus DNA polymerase i genes for detection of Treponema pallidum by PCR in ulcers | Journal of clinical microbiology | | 2015 | 708 | 0 | ||
| Label-free SRM-based relative quantification of antibiotic resistance mechanisms in Pseudomonas aeruginosa clinical isolates | Frontiers in microbiology | | 2015 | 553 | 319 | ||
| Collateral damage from oral ciprofloxacin versus nitrofurantoin in outpatients with urinary tract infections: a culture-free analysis of gut microbiota | Clinical microbiology and infection | | 2015 | 741 | 0 | ||
| Mapping axillary microbiota responsible for body odours using a culture-independent approach | Microbiome | | 2015 | 608 | 289 | ||
| Modelling antibiotic and cytotoxic isoquinoline effects in Staphylococcus aureus, Staphylococcus epidermidis and mammalian cells | International journal of medical microbiology | | 2015 | 850 | 0 | ||
| Meropenem/colistin synergy testing for multidrug-resistant Acinetobacter baumannii strains by a two-dimensional gradient technique applicable in routine microbiology | The journal of antimicrobial chemotherapy | | 2015 | 629 | 0 | ||
| Oropharyngeal K. kingae carriage in children: characteristics and correlation with osteoarticular infections | Pediatric research | | 2015 | 631 | 1 | ||
| Confident identification of filamentous fungi by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry without subculture-based sample preparation | International journal of infectious diseases | | 2015 | 587 | 351 | ||
| Characteristics of multidrug-resistant Acinetobacter baumannii strains isolated in Geneva during colonization or infection | Annals of clinical microbiology and antimicrobials | | 2015 | 522 | 260 | ||
| Xpert(®) MTB/RIF assay sensitivity with different methods of CSF processing for the diagnosis of TB meningitis | The international journal of tuberculosis and lung disease | | 2015 | 522 | 382 | ||
| Repeated exposures to blue light-activated eosin Y enhance inactivation of E. faecalis biofilms, in vitro | Photodiagnosis and photodynamic therapy | | 2015 | 607 | 626 | ||
| Use of Treponema pallidum PCR in testing of ulcers for diagnosis of primary syphilis | Emerging infectious diseases | | 2015 | 808 | 442 | ||
| Alterations of gut barrier and gut microbiota in food restriction, food deprivation and protein-energy wasting | Clinical nutrition | | 2015 | 601 | 5 | ||
| Ground steel target plates in combination with direct transfer of clinical Candida isolates improves frequencies of species-level identification by matrix-assisted laser desorption ionization-time of flight mass spectrometry | Journal of clinical microbiology | | 2015 | 492 | 0 | ||
| Rapid Diagnosis of Infection in the Critically Ill, a Multicenter Study of Molecular Detection in Bloodstream Infections, Pneumonia, and Sterile Site Infections | Critical care medicine | | 2015 | 594 | 555 | ||
| Diagnostic de la gastroentérite bactérienne | Revue médicale suisse | | 2015 | 528 | 0 | ||
| Ampicillin-resistant Haemophilus influenzae isolates in Geneva: serotype, antimicrobial susceptibility, and β-lactam resistance mechanisms | European journal of clinical microbiology & infectious diseases | | 2015 | 592 | 0 | ||
| Tests rapides lors d'infection respiratoire : une aide à la non-prescription d'antibiotiques ? | Revue médicale suisse | | 2014 | 460 | 0 | ||
| Quels bénéfices pour les cliniciens de la mise en place du MALDI-TOF/MS dans le laboratoire de bactériologie ? | Revue médicale suisse | | 2014 | 585 | 0 | ||
| Does Colonization with Methicillin-Susceptible Staphylococcus aureus Protect against Nosocomial Acquisition of Methicillin-Resistant S. aureus? | Infection control and hospital epidemiology | | 2014 | 722 | 0 | ||
| Le nouveau Visage de la microbiologie diagnostique | Revue médicale suisse | | 2014 | 478 | 0 | ||
| Bordetella holmesii: an under-recognised Bordetella species | Lancet. Infectious diseases | | 2014 | 728 | 0 | ||
| Relapse of Tropheryma whipplei endocarditis treated by trimethoprim/sulfamethoxazole, cured by hydroxychloroquine plus doxycycline | International journal of infectious diseases | | 2014 | 661 | 405 | ||
| Contamination of stethoscopes and physicians' hands after a physical examination | Mayo Clinic proceedings | | 2014 | 690 | 0 | ||
| Genome Sequence of Lactococcus lactis subsp. lactis bv. diacetylactis LD61 | Genome announcements | | 2014 | 552 | 252 | ||
| Approches diagnostiques des bactéries intracellulaires et des germes fastidieux | Revue médicale suisse | | 2014 | 692 | 0 | ||
| Generation of a vancomycin-intermediate Staphylococcus aureus (VISA) strain by two amino acid exchanges in VraS | The journal of antimicrobial chemotherapy | | 2014 | 557 | 0 | ||
| Microbiome of prebiotic-treated mice reveals novel targets involved in host response during obesity | The ISME journal | | 2014 | 630 | 453 | ||
| Flow cytometric assessment of Streptococcus mutans viability after exposure to blue light-activated curcumin | Photodiagnosis and photodynamic therapy | | 2014 | 717 | 3 | ||
| Antibacterial efficacy of accelerated photoactivated chromophore for keratitis-corneal collagen cross-linking (PACK-CXL) | Journal of refractive surgery | 2014 | 721 | 0 | |||
| Antibiotic susceptibility and molecular epidemiology of Panton-Valentine leukocidin-positive meticillin-resistant Staphylococcus aureus: An international survey | Journal of Global Antimicrobial Resistance | | 2014 | 582 | 0 | ||
| Polymerase-chain reaction/electrospray ionization-mass spectrometry for the detection of bacteria and fungi in bronchoalveolar lavage fluids: a prospective observational study | Clinical microbiology and infection | | 2014 | 565 | 0 | ||
| Fulminant atypical Cryptococcus neoformans pneumonia confirmed by PLEX-ID | International journal of infectious diseases | | 2014 | 574 | 183 | ||
| Génomique et métagénomique bactériennes : applications cliniques et importance médicale | Revue médicale suisse | | 2014 | 682 | 1 | ||
| Candida Species Distribution and Antifungal Susceptibility Testing According to EUCAST and New vs. Old CLSI Clinical Breakpoints: a Six-Year Prospective Candidemia Survey from the Fungal Infection Network of Switzerland (FUNGINOS) | Clinical microbiology and infection | | 2014 | 938 | 1,007 | ||
| Primary epiphyseal or apophyseal subacute osteomyelitis in the pediatric population: a report of fourteen cases and a systematic review of the literature | Journal of bone and joint surgery. American volume | | 2014 | 624 | 1 | ||
| GdpS contributes to Staphylococcus aureus biofilm formation by regulation of eDNA release | International journal of medical microbiology | | 2014 | 663 | 2 | ||
| Infections ostéo-articulaires sévères à staphylocoque doré producteur de leucocidine de Panton-Valentine chez l'enfant | Revue médicale suisse | | 2014 | 685 | 1 | ||
| Bêtalactamases à spectre étendu et carbapénémases chez les Enterobacteriaceae | Revue médicale suisse | | 2014 | 662 | 0 | ||
| De novo finished 2.8 Mbp Staphylococcus aureus genome assembly from 100 bp short and long range paired-end reads | Bioinformatics | | 2014 | 739 | 435 | ||
| Proteomic approach to investigate pathogenicity and metabolism of methicillin-resistant Staphylococcus aureus | Methods in molecular biology | 2014 | 808 | 0 | |||
| Extended-Spectrum ß-Lactamase-Producing Enterobacteriaceae in Hospital Food: A Risk Assessment | Infection control and hospital epidemiology | | 2014 | 551 | 2 | ||
| Accelerated photoactivated chromophore for keratitis-corneal collagen cross-linking as a first-line and sole treatment in early fungal keratitis | Journal of refractive surgery | 2014 | 570 | 0 | |||
| Antimicrobial Activity and Cytotoxicity of 3 Photosensitizers Activated with Blue Light | Journal of endodontics | | 2014 | 711 | 3 | ||
| A genomic perspective on a new bacterial genus and species from the Alcaligenaceae family, Basilea psittacipulmonis | BMC genomics | | 2014 | 703 | 333 | ||
| Diagnosis of whooping cough in Switzerland: differentiating Bordetella pertussis from Bordetella holmesii by polymerase chain reaction | PloS one | | 2014 | 759 | 330 | ||
| Characterization of Streptococcus tigurinus small-colony variants causing prosthetic joint infection by comparative whole-genome analyses | Journal of clinical microbiology | | 2014 | 714 | 369 | ||
| Multi-well fungal co-culture for de novo metabolite-induction in time-series studies based on untargeted metabolomics | Molecular bioSystems | | 2014 | 575 | 1 | ||
| A prospective study of intrafamilial oropharyngeal transmission of Kingella kingae | The Pediatric infectious disease journal | | 2014 | 548 | 359 | ||
| Staphylococcus aureus: the innocent culprit? | Infection, genetics and evolution | | 2014 | 578 | 96 | ||
| Challenges in the culture-independent analysis of oral and respiratory samples from intubated patients | Frontiers in cellular and infection microbiology | | 2014 | 727 | 274 | ||
| Noma affected children from niger have distinct oral microbial communities based on high-throughput sequencing of 16S rRNA gene fragments | PLoS neglected tropical diseases | | 2014 | 695 | 289 | ||
| Fine-tuned characterization of Staphylococcus aureus Newbould 305, a strain associated with mild and chronic mastitis in bovines | Veterinary research | | 2014 | 578 | 640 | ||
| Diagnostic microbiologique de la pneumonie | Revue médicale suisse | | 2014 | 535 | 2 | ||
| Burden of bloodstream infection caused by extended-spectrum ß-lactamase-producing enterobacteriaceae determined using multistate modeling at a Swiss University Hospital and a nationwide predictive model | Infection control and hospital epidemiology | | 2013 | 1,242 | 1,245 | ||
| Carriage of extended-spectrum beta-lactamase-producing enterobacteriacae among internal medicine patients in Switzerland | Antimicrobial resistance and infection control | | 2013 | 754 | 268 | ||
| Analysis of the small RNA transcriptional response in multidrug-resistant Staphylococcus aureus after antimicrobial exposure | Antimicrobial agents and chemotherapy | | 2013 | 627 | 0 | ||
| Rapid clinical bacteriology and its future impact | Annals of laboratory medicine | | 2013 | 661 | 789 | ||
| Risk factors for noma disease: a 6-year, prospective, matched case-control study in Niger | The Lancet. Global health | | 2013 | 923 | 687 | ||
| Microarray Analysis of Microbiota of Gingival Lesions in Noma Patients | PLoS neglected tropical diseases | | 2013 | 722 | 1,076 | ||
| Methicillin-resistant Staphylococcus aureus risk profiling: who are we missing? | Antimicrobial resistance and infection control | | 2013 | 671 | 227 | ||
| Antibiotic resistance patterns among group B Streptococcus isolates: implications for antibiotic prophylaxis for early-onset neonatal sepsis | Schweizerische medizinische Wochenschrift | | 2013 | 2,087 | 792 | ||
| HIV infection disrupts the sympatric host-pathogen relationship in human tuberculosis | PLOS genetics | | 2013 | 927 | 628 | ||
| The CshA DEAD-box RNA helicase is important for quorum sensing control in Staphylococcus aureus | RNA biology | | 2013 | 741 | 525 | ||
| Burden of meticillin-resistant Staphylococcus aureus infections at a Swiss University hospital: excess length of stay and costs | The Journal of hospital infection | | 2013 | 666 | 0 | ||
| CC9 livestock-associated Staphylococcus aureus emerges in bloodstream infections in French patients unconnected with animal farming | Clinical infectious diseases | | 2013 | 641 | 573 | ||
| Impact of fluorescein on the antimicrobial efficacy of photoactivated riboflavin in corneal collagen cross-linking | Journal of refractive surgery | 2013 | 627 | 0 | |||
| Whole-Genome Sequences of Streptococcus tigurinus Type Strain AZ_3a and S. tigurinus 1366, a Strain Causing Prosthetic Joint Infection | Genome announcements | | 2013 | 574 | 230 | ||
| Detection of Kingella kingae osteoarticular infections in children by oropharyngeal swab PCR | Pediatrics | | 2013 | 782 | 849 | ||
| Decolonization of intestinal carriage of extended-spectrum ß-lactamase-producing Enterobacteriaceae with oral colistin and neomycin: a randomized, double-blind, placebo-controlled trial | The journal of antimicrobial chemotherapy | | 2013 | 659 | 711 | ||
| Capnocytophaga canimorsus prosthetic aortitis in an HIV-positive woman | Journal of clinical microbiology | | 2013 | 715 | 292 | ||
| Comparison of DNA extraction methods in analysis of salivary bacterial communities | PloS one | | 2013 | 770 | 333 | ||
| Molecular-based Screening for Perinatal Group B Streptococcal Infection: Implications for Prevention and Therapy | Molecular diagnosis & therapy | | 2013 | 650 | 557 | ||
| Effects of amoxicillin treatment on the salivary microbiota in children with acute otitis media | Clinical microbiology and infection | | 2013 | 724 | 352 | ||
| 30 years of study of Kingella kingae: post tenebras, lux | Future microbiology | | 2013 | 913 | 1,313 | ||
| Bacterial genome evolution within a clonal population: from in vitro investigations to in vivo observations | Future microbiology | | 2013 | 650 | 510 | ||
| Comparing the oropharyngeal colonization density of Kingella kingae between asymptomatic carriers and children with invasive osteoarticular infections | The Pediatric infectious disease journal | | 2013 | 687 | 509 | ||
| A de novo-designed antimicrobial peptide with activity against multiresistant Staphylococcus aureus acting on RsbW kinase | The FASEB journal | | 2013 | 746 | 1,659 | ||
| A correlative analysis of epidemiologic and molecular characteristics of methicillin-resistant Staphylococcus aureus clones from diverse geographic locations with virulence measured by a Caenorhabditis elegans host model | European journal of clinical microbiology & infectious diseases | | 2013 | 683 | 278 | ||
| Human-to-bovine jump of Staphylococcus aureus CC8 is associated with the loss of a β-hemolysin converting prophage and the acquisition of a new staphylococcal cassette chromosome | PloS one | | 2013 | 690 | 452 | ||
| Oropharyngeal colonization density of Kingella kingae | The Pediatric infectious disease journal | | 2013 | 659 | 513 | ||
| Blue light-mediated inactivation of Enterococcus faecalis in vitro | Photodiagnosis and photodynamic therapy | | 2013 | 673 | 9 | ||
| Global analysis of the Staphylococcus aureus response to mupirocin | Antimicrobial agents and chemotherapy | | 2012 | 589 | 0 | ||
| Small risk of osteoarticular infections in children with asymptomatic oropharyngeal carriage of Kingella kingae | The Pediatric infectious disease journal | | 2012 | 635 | 596 | ||
| Genome sequence of Staphylococcus aureus Newbould 305, a strain associated with mild bovine mastitis | Journal of bacteriology | | 2012 | 685 | 367 | ||
| The stringent response of Staphylococcus aureus and its impact on survival after phagocytosis through the induction of intracellular PSMs expression | PLOS pathogens | | 2012 | 655 | 875 | ||
| High prevalence of isolates with reduced glycopeptide susceptibility in persistent or recurrent bloodstream infections due to methicillin-resistant Staphylococcus aureus | Antimicrobial agents and chemotherapy | | 2012 | 624 | 0 | ||
| Nosocomial acquisition of methicillin-resistant Staphyloccocus aureus (MRSA) and extended-spectrum beta-lactamase (ESBL) Enterobacteriaceae in hospitalised patients: a prospective multicenter study | BMC infectious diseases | | 2012 | 615 | 248 | ||
| Core genome conservation of Staphylococcus haemolyticus limits sequence based population structure analysis | Journal of microbiological methods | | 2012 | 716 | 854 | ||
| Tn125-related acquisition of blaNDM-like genes in Acinetobacter baumannii | Antimicrobial agents and chemotherapy | | 2012 | 611 | 0 | ||
| Emergence of OXA-48-producing Enterobacteriaceae in Switzerland | International journal of antimicrobial agents | | 2012 | 681 | 582 | ||
| Dissemination of New Delhi metallo-β-lactamase-1-producing Acinetobacter baumannii in Europe | Clinical microbiology and infection | | 2012 | 632 | 343 | ||
| Bench-to-bedside review: Rapid molecular diagnostics for bloodstream infection - a new frontier? | Critical care | | 2012 | 656 | 255 | ||
| Analysis of the salivary microbiome using culture-independent techniques | Journal of clinical bioinformatics | | 2012 | 742 | 301 | ||
| Carbapénémases: implications cliniques et épidémiologiques pour la Suisse | Revue médicale suisse | | 2012 | 1,177 | 868 | ||
| Epidemiology of methicillin-resistant Staphylococcus aureus carriage and MRSA surgical site infections in patients undergoing colorectal surgery: a cohort study in two centers | Surgical infections | | 2012 | 814 | 469 | ||
| Prevalence of isolates with reduced glycopeptide susceptibility in orthopedic device-related infections due to methicillin-resistant Staphylococcus aureus | European journal of clinical microbiology & infectious diseases | | 2012 | 689 | 289 | ||
| Bacterial diversity in oral samples of children in niger with acute noma, acute necrotizing gingivitis, and healthy controls | PLoS neglected tropical diseases | | 2012 | 830 | 400 | ||
| Tuberculosis in HIV-negative and HIV-infected patients in a low-incidence country: clinical characteristics and treatment outcomes | PloS one | | 2012 | 647 | 466 | ||
| Multistate modelling to estimate the excess length of stay associated with meticillin-resistant Staphylococcus aureus colonisation and infection in surgical patients | The Journal of hospital infection | | 2011 | 489 | 0 | ||
| Nouveaux tests pour le diagnostic de la tuberculose | Revue des maladies respiratoires | | 2011 | 678 | 1 | ||
| Daptomycin resistance mechanisms in clinically derived Staphylococcus aureus strains assessed by a combined transcriptomics and proteomics approach | The journal of antimicrobial chemotherapy | | 2011 | 646 | 0 | ||
| Correlation of daptomycin resistance in a clinical Staphylococcus aureus strain with increased cell wall teichoic acid production and D-alanylation | Antimicrobial agents and chemotherapy | | 2011 | 559 | 0 | ||
| Predictive Score to Discriminate Kingella kingae From Staphylococcus aureus Arthritis in France: reply | The Pediatric infectious disease journal | | 2011 | 633 | 0 | ||
| Epidemiology and virulence insights from MRSA and MSSA genome analysis | Future microbiology | | 2011 | 653 | 0 | ||
| Molecular and epidemiological evaluation of strain replacement in patients previously harboring gentamicin-resistant MRSA | Journal of clinical microbiology | | 2011 | 541 | 0 | ||
| Molecular basis of virulence in Staphylococcus aureus mastitis | PloS one | | 2011 | 683 | 437 | ||
| Trends in mupirocin resistance in meticillin-resistant Staphylococcus aureus and mupirocin consumption at a tertiary care hospital | The Journal of hospital infection | | 2011 | 640 | 1 | ||
| High prevalence of the arginine catabolic mobile element in carriage isolates of methicillin-resistant Staphylococcus epidermidis | The journal of antimicrobial chemotherapy | | 2011 | 557 | 0 | ||
| Differentiating osteoarticular infections caused by Kingella kingae from those due to typical pathogens in young children | The Pediatric infectious disease journal | | 2011 | 558 | 0 | ||
| Histone deacetylase inhibitors impair innate immune responses to Toll-like receptor agonists and to infection | Blood | | 2011 | 651 | 0 | ||
| Methicillin-susceptible ST398 Staphylococcus aureus responsible for bloodstream infections: an emerging human-adapted subclone? | PloS one | | 2011 | 677 | 332 | ||
| Altered gut microbiota and endocannabinoid system tone in obese and diabetic leptin-resistant mice: impact on apelin regulation in adipose tissue | Frontiers in microbiology | | 2011 | 593 | 254 | ||
| Modelling the impact of antibiotic use on antibiotic-resistant Escherichia coli using population-based data from a large hospital and its surrounding community | The journal of antimicrobial chemotherapy | | 2011 | 917 | 2 | ||
| How could rapid bacterial identification improve the management of septic patients? | Expert review of anti-infective therapy | | 2011 | 533 | 0 | ||
| Evaluation of eight cases of confirmed Bordetella bronchiseptica infection and colonization over a 15-year period | Clinical microbiology and infection | | 2011 | 632 | 1 | ||
| Role of the SaeRS two-component regulatory system in Staphylococcus epidermidis autolysis and biofilm formation | BMC Microbiology | | 2011 | 632 | 345 | ||
| Impact of combined low-level mupirocin and genotypic chlorhexidine resistance on persistent methicillin-resistant Staphylococcus aureus carriage after decolonization therapy: a case-control study | Clinical infectious diseases | | 2011 | 644 | 0 | ||
| Emergence of unusual bloodstream infections associated with pig-borne-like Staphylococcus aureus ST398 in France | Clinical infectious diseases | | 2011 | 563 | 0 | ||
| Molecular analysis of NDM-1-producing enterobacterial isolates from Geneva, Switzerland | The journal of antimicrobial chemotherapy | | 2011 | 620 | 0 | ||
| PCR for the diagnosis of sepsis: hope or hype? | Critical care | | 2011 | 590 | 147 | ||
| Evaluation of matrix-assisted laser desorption ionization-time of flight mass spectrometry for rapid identification of Beta-hemolytic streptococci | Journal of clinical microbiology | | 2011 | 615 | 0 | ||
| The σB-dependent yabJ-spoVG operon is involved in the regulation of extracellular nuclease, lipase, and protease expression in Staphylococcus aureus | Journal of bacteriology | | 2011 | 607 | 0 | ||
| Comparative analysis of PCR-electrospray ionization/mass spectrometry (MS) and MALDI-TOF/MS for the identification of bacteria and yeast from positive blood culture bottles | Clinical chemistry | | 2011 | 672 | 0 | ||
| Mélioïdose : une pathologie tropicale méconnue | Revue médicale suisse | | 2011 | 640 | 1 | ||
| The CodY pleiotropic repressor controls virulence in gram-positive pathogens | FEMS immunology and medical microbiology | | 2011 | 694 | 674 | ||
| Robustness of a loop-mediated isothermal amplification reaction for diagnostic applications | FEMS immunology and medical microbiology | | 2011 | 1,009 | 0 | ||
| Responses of gut microbiota and glucose and lipid metabolism to prebiotics in genetic obese and diet-induced leptin-resistant mice | Diabetes | | 2011 | 678 | 0 | ||
| Genome sequences of two Staphylococcus aureus ovine strains that induce severe (strain O11) and mild (strain O46) mastitis | Journal of bacteriology | | 2011 | 630 | 0 | ||
| Intrapartum Group B streptococcus detection by rapid polymerase chain reaction assay for the prevention of neonatal sepsis | Clinical microbiology and infection | | 2011 | 697 | 0 | ||
| Staphylococcus aureus seroproteomes discriminate ruminant isolates causing mild or severe mastitis | Veterinary research | | 2011 | 638 | 272 | ||
| Fatal acute melioidosis in a tourist returning from Martinique Island, November 2010 | Euro surveillance | | 2011 | 710 | 0 | ||
| First detection of an invasive Staphylococcus aureus strain (D958) with reduced susceptibility to glycopeptides in Saudi Arabia | Journal of clinical microbiology | | 2010 | 614 | 0 | ||
| Prevalence and associated factors for Chlamydia trachomatis infection among undocumented immigrants in a primary care facility in Geneva, Switzerland: a cross-sectional study | Journal of immigrant and minority health | | 2010 | 809 | 374 | ||
| Risk factors for treatment failure in orthopedic device-related methicillin-resistant Staphylococcus aureus infection | European journal of clinical microbiology & infectious diseases | | 2010 | 715 | 258 | ||
| Accelerated digestion for high-throughput proteomics analysis of whole bacterial proteomes | Journal of microbiological methods | | 2010 | 668 | 0 | ||
| Screening for staphylococcal superantigen genes shows no correlation with the presence or the severity of chronic rhinosinusitis and nasal polyposis | PloS one | | 2010 | 727 | 301 | ||
| Methicillin-resistant coagulase-negative staphylococci in the community: high homology of SCCmec IVa between Staphylococcus epidermidis and major clones of methicillin-resistant Staphylococcus aureus | The Journal of infectious diseases | | 2010 | 706 | 0 | ||
| Kingella Kingae osteoarticular infections in young children: clinical features and contribution of a new specific real-time PCR assay to the diagnosis | Journal of pediatric orthopedics | | 2010 | 609 | 0 | ||
| Comparison of two matrix-assisted laser desorption ionization-time of flight mass spectrometry methods with conventional phenotypic identification for routine identification of bacteria to the species level | Journal of clinical microbiology | | 2010 | 649 | 0 | ||
| Posttraumatic ankle arthritis due to a novel Nocardia species | Infection | | 2010 | 676 | 286 | ||
| Cartography of methicillin-resistant S. aureus transcripts: detection, orientation and temporal expression during growth phase and stress conditions | PloS one | | 2010 | 669 | 255 | ||
| Inactivation of the Ecs ABC transporter of Staphylococcus aureus attenuates virulence by altering composition and function of bacterial wall | PloS one | | 2010 | 627 | 331 | ||
| Application and use of various mass spectrometry methods in clinical microbiology | Clinical microbiology and infection | | 2010 | 647 | 0 | ||
| Molecular epidemiology of the nasal colonization by methicillin-susceptible Staphylococcus aureus in Swiss children | Clinical microbiology and infection | | 2010 | 630 | 0 | ||
| Kingella kingae spondylodiscitis in young children: toward a new approach for bacteriological investigations? A preliminary report | Journal of children's orthopaedics | | 2010 | 648 | 1 | ||
| Proteomic approaches to study Staphylococcus aureus pathogenesis | Journal of proteomics | | 2010 | 597 | 0 | ||
| Molecular diagnosis of bloodstream infections: planning to (physically) reach the bedside | Current opinion in infectious diseases | | 2010 | 535 | 0 | ||
| Microstructuring of polymer films for sensitive genotyping by real-time PCR on a centrifugal microfluidic platform | Lab on a chip | | 2010 | 638 | 0 | ||
| Study of inter- and intra-individual variations in the salivary microbiota | BMC genomics | | 2010 | 658 | 296 | ||
| Development of a rapid PCR assay for screening of maternal colonization by group B streptococcus and neonatal invasive Escherichia coli during labor | Gynecologic and obstetric investigation | | 2010 | 618 | 1 | ||
| Comparative genomics of epidemic versus sporadic Staphylococcus aureus strains does not reveal molecular markers for epidemicity | Infection, genetics and evolution | | 2010 | 652 | 0 | ||
| New approaches for functional genomic studies in staphylococci | International journal of medical microbiology | | 2010 | 594 | 0 | ||
| Cost-effectiveness of universal MRSA screening on admission to surgery | Clinical microbiology and infection | | 2010 | 603 | 0 | ||
| Another small step on the long way to control methicillin-resistant Staphylococcus aureus cross-transmission | Critical care medicine | | 2010 | 547 | 0 | ||
| A type III-like restriction endonuclease functions as a major barrier to horizontal gene transfer in clinical Staphylococcus aureus strains | Proceedings of the National Academy of Sciences of the United States of America | | 2010 | 738 | 218 | ||
| Infections ostéo-articulaires septiques à culture négative chez l'enfant : avez-vous pensé à Kingella kingae ? | Revue médicale suisse | | 2009 | 555 | 0 | ||
| Microarray comparative genomic hybridisation analysis incorporating genomic organisation, and application to enterobacterial plant pathogens | PLoS computational biology | | 2009 | 534 | 287 | ||
| Effect of a glucose impulse on the CcpA regulon in Staphylococcus aureus | BMC Microbiology | | 2009 | 607 | 607 | ||
| Immuno-detection of Staphylococcus aureus biofilm on a cochlear implant | Infection | | 2009 | 753 | 303 | ||
| A search for small noncoding RNAs in Staphylococcus aureus reveals a conserved sequence motif for regulation | Nucleic acids research | | 2009 | 629 | 0 | ||
| Cas importés d'histoptasmose | Revue médicale suisse | 2009 | 625 | 0 | |||
| Development and evaluation of a rapid strategy to determine enterotoxin gene content in Staphylococcus aureus | Journal of microbiological methods | | 2009 | 602 | 0 | ||
| Regulation of mprF in daptomycin-nonsusceptible Staphylococcus aureus strains | Antimicrobial agents and chemotherapy | | 2009 | 534 | 0 | ||
| High-throughput typing of Staphylococcus aureus by amplified fragment length polymorphism (AFLP) or multi-locus variable number of tandem repeat analysis (MLVA) reveals consistent strain relatedness | European journal of clinical microbiology & infectious diseases | | 2009 | 656 | 283 | ||
| Variable-number tandem repeat analysis and multilocus sequence typing data confirm the epidemiological changes observed with Staphylococcus aureus strains isolated from bloodstream infections | Journal of clinical microbiology | | 2009 | 523 | 0 | ||
| Assessment of a real-time PCR test to diagnose syphilis from diverse biological samples | Sexually transmitted infections | | 2009 | 595 | 0 | ||
| Development and validation of a modified broad-range 16S rDNA PCR for diagnostic purposes in clinical microbiology | Journal of microbiological methods | | 2009 | 662 | 0 | ||
| CodY in Staphylococcus aureus: a regulatory link between metabolism and virulence gene expression | Journal of bacteriology | | 2009 | 736 | 1 | ||
| Metagenomic study of the oral microbiota by Illumina high-throughput sequencing | Journal of microbiological methods | | 2009 | 656 | 0 | ||
| Characterization of microbial pathogens by DNA microarrays | Infection, genetics and evolution | | 2009 | 628 | 0 | ||
| Molecular diagnosis of Kingella kingae osteoarticular infections by specific real-time PCR assay | Journal of Medical Microbiology | | 2009 | 566 | 0 | ||
| Transcriptome analysis of the responses of Staphylococcus aureus to antimicrobial peptides and characterization of the roles of vraDE and vraSR in antimicrobial resistance | BMC genomics | | 2009 | 688 | 526 | ||
| Genomic analysis of an emerging multiresistant Staphylococcus aureus strain rapidly spreading in cystic fibrosis patients revealed the presence of an antibiotic inducible bacteriophage | Biology direct | | 2009 | 707 | 529 | ||
| Surveillance of extended-spectrum-beta-lactamase-producing Enterobacteriaceae in a Swiss Tertiary Care Hospital | Schweizerische medizinische Wochenschrift | | 2009 | 553 | 5 | ||
| Identification by genomic and genetic analysis of two new genes playing a key role in intermediate glycopeptide resistance in Staphylococcus aureus | Antimicrobial agents and chemotherapy | | 2009 | 787 | 0 | ||
| Community-associated methicillin-resistant Staphylococcus aureus: risk factors for infection, and long-term follow-up | Clinical microbiology and infection | | 2009 | 620 | 1 | ||
| Ceftazidime-resistant Klebsiella oxytoca producing an OXY-2-type variant from Switzerland | International journal of antimicrobial agents | | 2008 | 676 | 0 | ||
| A nuc-deficient meticillin-resistant Staphylococcus aureus strain | FEMS immunology and medical microbiology | | 2008 | 586 | 0 | ||
| Methicillin-resistant Staphylococcus aureus, Geneva, Switzerland, 1993-2005 | Emerging infectious diseases | | 2008 | 579 | 0 | ||
| Failures in clinical treatment of Staphylococcus aureus Infection with daptomycin are associated with alterations in surface charge, membrane phospholipid asymmetry, and drug binding | Antimicrobial agents and chemotherapy | | 2008 | 523 | 0 | ||
| Food poisoning as a cause of acute liver failure | The Pediatric infectious disease journal | | 2008 | 736 | 0 | ||
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| Lack of biofilm contribution to bacterial colonisation in an experimental model of foreign body infection by Staphylococcus aureus and Staphylococcus epidermidis | FEMS immunology and medical microbiology | | 2003 | 484 | 0 | ||
| Effect of vancomycin therapy for osteomyelitis on colonization by methicillin-resistant Staphylococcus aureus: lack of emergence of glycopeptide resistance | Infection control and hospital epidemiology | | 2003 | 653 | 0 | ||
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