ED
Dermitzakis, Emmanouil
| Title | Published in | Access level | OA Policy | Year | Views | Downloads | |
|---|---|---|---|---|---|---|---|
| Multi-omics correlates of insulin resistance and circadian parameters mapped directly from human serum | European journal of neuroscience | 2024 | 84 | 163 | |||
| Regulation of HLA class I expression by non-coding gene variations | PLOS genetics | 2022 | 172 | 196 | |||
| Contribution of schizophrenia polygenic burden to longitudinal phenotypic variance in 22q11.2 deletion syndrome | Molecular psychiatry | 2022 | 245 | 214 | |||
| Specific transcriptomic signatures and dual regulation of steroidogenesis between fetal and adult mouse leydig cells | Frontiers in Cell and Developmental Biology | 2021 | 208 | 234 | |||
| Gene regulation contributes to explain the impact of early life socioeconomic disadvantage on adult inflammatory levels in two cohort studies | Scientific reports | 2021 | 256 | 262 | |||
| Ether lipids, sphingolipids and toxic 1-deoxyceramides as hallmarks for lean and obese type 2 diabetic patients | Acta Physiologica | 2021 | 399 | 3 | |||
| Quantification of the spread of SARS-CoV-2 variant B.1.1.7 in Switzerland | Epidemics | 2021 | 371 | 121 | |||
| Single-cell transcriptomics reveal temporal dynamics of critical regulators of germ cell fate during mouse sex determination | FASEB Journal | 2021 | 207 | 184 | |||
| Genetic variant effects on gene expression in human pancreatic islets and their implications for T2D | Nature Communications | 2020 | 345 | 195 | |||
| A brief history of human disease genetics | Nature | 2020 | 76 | 247 | |||
| Chromatin three-dimensional interactions mediate genetic effects on gene expression | Science | 2019 | 358 | 2 | |||
| Discovery of biomarkers for glycaemic deterioration before and after the onset of type 2 diabetes: descriptive characteristics of the epidemiological studies within the IMI DIRECT Consortium | Diabetologia | 2019 | 269 | 85 | |||
| Combined genetic and transcriptome analysis of patients with SLE: distinct, targetable signatures for susceptibility and severity | Annals of the Rheumatic Diseases | 2019 | 453 | 188 | |||
| Accurate, scalable and integrative haplotype estimation | Nature Communications | 2019 | 296 | 392 | |||
| Expression estimation and eQTL mapping for HLA genes with a personalized pipeline | PLOS Genetics | 2019 | 241 | 155 | |||
| Cellular circadian period length inversely correlates with HbA1c levels in individuals with type 2 diabetes | Diabetologia | 2019 | 521 | 5 | |||
| High-fat diet impacts more changes in beta-cell compared to alpha-cell transcriptome | PloS one | 2019 | 2 | 3 | |||
| Socioeconomic position, lifestyle habits and biomarkers of epigenetic aging: a multi-cohort analysis | Aging | 2019 | 212 | 554 | |||
| Dissecting Cell Lineage Specification and Sex Fate Determination in Gonadal Somatic Cells Using Single-Cell Transcriptomics | Cell Reports | 2019 | 476 | 345 | |||
| MRPL53, a new candidate gene for orofacial clefting, identified using an eQTL approach | Journal of Dental Research | 2018 | 331 | 0 | |||
| Angiogenin and osteoprotegerin are type II muscle specific myokines protecting pancreatic beta-cells against proinflammatory cytokines | Scientific Reports | 2018 | 436 | 114 | |||
| Age-dependent changes in mean and variance of gene expression across tissues in a twin cohort | Human Molecular Genetics | 2018 | 382 | 86 | |||
| Comprehensive evaluation of coding region point mutations in microsatellite‐unstable colorectal cancer | EMBO Molecular Medicine | 2018 | 386 | 133 | |||
| Transcriptomic analyses reveal rhythmic and CLOCK-driven pathways in human skeletal muscle | eLife | 2018 | 588 | 228 | |||
| Contribution of allelic imbalance to colorectal cancer | Nature Communications | 2018 | 384 | 284 | |||
| Deciphering Cell Lineage Specification during Male Sex Determination with Single-Cell RNA Sequencing | Cell Reports | 2018 | 457 | 344 | |||
| Using an atlas of gene regulation across 44 human tissues to inform complex disease- and trait-associated variation | Nature Genetics | 2018 | 410 | 0 | |||
| Genome-wide analysis of differential transcriptional and epigenetic variability across human immune cell types | Genome Biology | 2017 | 407 | 281 | |||
| The impact of rare variation on gene expression across tissues | Nature | 2017 | 449 | 198 | |||
| The effect of genetic variation on promoter usage and enhancer activity | Nature Communications | 2017 | 372 | 201 | |||
| Co-expression networks reveal the tissue-specific regulation of transcription and splicing | Genome Research | 2017 | 451 | 243 | |||
| Estimating the causal tissues for complex traits and diseases | Nature Genetics | 2017 | 541 | 1,169 | |||
| Predicting causal variants affecting expression by using whole-genome sequencing and RNA-seq from multiple human tissues | Nature Genetics | 2017 | 432 | 889 | |||
| MBV: a method to solve sample mislabeling and detect technical bias in large combined genotype and sequencing assay datasets | Bioinformatics | 2017 | 435 | 124 | |||
| Integrative genomic analysis implicates limited peripheral adipose storage capacity in the pathogenesis of human insulin resistance | Nature Genetics | 2017 | 416 | 0 | |||
| Dynamic landscape and regulation of RNA editing in mammals | Nature | 2017 | 433 | 0 | |||
| Molecular-Subtype-Specific Biomarkers Improve Prediction of Prognosis in Colorectal Cancer | Cell Reports | 2017 | 449 | 261 | |||
| Genetic correlations reveal the shared genetic architecture of transcription in human peripheral blood | Nature Communications | 2017 | 374 | 207 | |||
| Time-dependent genetic effects on gene expression implicate aging processes | Genome Research | 2017 | 394 | 179 | |||
| Chromosomal contacts connect loci associated with autism, BMI and head circumference phenotypes | Molecular Psychiatry | 2017 | 392 | 578 | |||
| The genomic landscape of human cellular circadian variation points to a novel role for the signalosome | eLife | 2017 | 440 | 238 | |||
| Inference and quantification of peptidoforms in large sample cohorts by SWATH-MS | Nature Biotechnology | 2017 | 410 | 510 | |||
| Genetic effects on gene expression across human tissues | Nature | 2017 | 471 | 257 | |||
| A complete tool set for molecular QTL discovery and analysis | Nature Communications | 2017 | 446 | 433 | |||
| The non-coding variant rs1800734 enhances DCLK3 expression through long-range interaction and promotes colorectal cancer progression | Nature Communications | 2017 | 400 | 253 | |||
| Identifying cis-mediators for trans-eQTLs across many human tissues using genomic mediation analysis | Genome Research | 2017 | 386 | 0 | |||
| Mapping eQTLs with RNA-seq reveals novel susceptibility genes, non-coding RNAs and alternative-splicing events in systemic lupus erythematosus | Human Molecular Genetics | 2017 | 421 | 247 | |||
| Genome-wide association analysis of self-reported events in 6135 individuals and 252 827 controls identifies 8 loci associated with thrombosis | Human molecular genetics | 2016 | 541 | 237 | |||
| Sequential transcriptional waves direct the differentiation of newborn neurons in the mouse neocortex | Science | 2016 | 996 | 0 | |||
| SNHG16 is regulated by the Wnt pathway in colorectal cancer and affects genes involved in lipid metabolism | Molecular Oncology | 2016 | 322 | 202 | |||
| Genetic Drivers of Epigenetic and Transcriptional Variation in Human Immune Cells | Cell | 2016 | 552 | 665 | |||
| IL-13 improves beta-cell survival and protects against IL-1beta-induced beta-cell death | Molecular metabolism | 2016 | 550 | 174 | |||
| Adiposity-Dependent Regulatory Effects on Multi-tissue Transcriptomes | American Journal of Human Genetics | 2016 | 418 | 291 | |||
| Fast and efficient QTL mapper for thousands of molecular phenotypes | Bioinformatics | 2016 | 541 | 407 | |||
| Alternative Splicing QTLs in European and African Populations | American journal of human genetics | 2015 | 524 | 207 | |||
| Human genomics. The Genotype-Tissue Expression (GTEx) pilot analysis: multitissue gene regulation in humans | Science | 2015 | 521 | 0 | |||
| Impaired Cell Cycle Regulation in a Natural Equine Model of Asthma | PloS one | 2015 | 497 | 321 | |||
| Biased allelic expression in human primary fibroblast single cells | American journal of human genetics | 2015 | 608 | 0 | |||
| Short Term Exposure of Beta Cells to Low Concentrations of Interleukin-1β Improves Insulin Secretion through Focal Adhesion and Actin Remodeling and Regulation of Gene Expression | The Journal of biological chemistry | 2015 | 571 | 2 | |||
| Transcript Expression Data from Human Islets Links Regulatory Signals from Genome-Wide Association Studies for Type 2 Diabetes and Glycemic Traits to Their Downstream Effectors | PLOS genetics | 2015 | 498 | 238 | |||
| Synchronized age-related gene expression changes across multiple tissues in human and the link to complex diseases | Scientific reports | 2015 | 535 | 418 | |||
| Integrated analysis of mRNA and miRNA expression in response to interleukin-6 in hepatocytes | Genomics | 2015 | 643 | 4 | |||
| Population Variation and Genetic Control of Modular Chromatin Architecture in Humans | Cell | 2015 | 518 | 0 | |||
| Tissue-specific effects of genetic and epigenetic variation on gene regulation and splicing | PLOS genetics | 2015 | 724 | 297 | |||
| Gene-gene and gene-environment interactions detected by transcriptome sequence analysis in twins | Nature genetics | 2015 | 547 | 0 | |||
| Human genomics. Effect of predicted protein-truncating genetic variants on the human transcriptome | Science | 2015 | 540 | 1 | |||
| Integrated analysis of mRNA and miRNA expression in response to interleukin-6 in hepatocytes | Data in brief | 2015 | 692 | 314 | |||
| Assessing allele-specific expression across multiple tissues from RNA-seq read data | Bioinformatics | 2015 | 547 | 1 | |||
| Human genomics. The human transcriptome across tissues and individuals | Science | 2015 | 417 | 0 | |||
| The transcriptome of equine peripheral blood mononuclear cells | PloS one | 2015 | 495 | 279 | |||
| Quantitative variability of 342 plasma proteins in a human twin population | Molecular systems biology | 2015 | 551 | 202 | |||
| Fractalkine (CX3CL1), a new factor protecting β-cells against TNFα | Molecular metabolism | 2014 | 687 | 419 | |||
| Whole exome sequencing of a dominant retinitis pigmentosa family identifies a novel deletion in PRPF31 | Investigative ophthalmology & visual science | 2014 | 467 | 257 | |||
| Gene Age Predicts the Strength of Purifying Selection Acting on Gene Expression Variation in Humans | American journal of human genetics | 2014 | 665 | 1 | |||
| Tandem RNA chimeras contribute to transcriptome diversity in human population and are associated with intronic genetic variants | PloS one | 2014 | 648 | 335 | |||
| Identification and removal of low-complexity sites in allele-specific analysis of ChIP-seq data | Bioinformatics | 2014 | 519 | 0 | |||
| Allelic mapping bias in RNA-sequencing is not a major confounder in eQTL studies | GenomeBiology.com | 2014 | 544 | 250 | |||
| Putative cis-regulatory drivers in colorectal cancer | Nature | 2014 | 516 | 0 | |||
| Cigarette smoking reduces DNA methylation levels at multiple genomic loci but the effect is partially reversible upon cessation | Epigenetics | 2014 | 564 | 0 | |||
| Genetic interactions affecting human gene expression identified by variance association mapping | eLife | 2014 | 516 | 496 | |||
| Cis and trans effects of human genomic variants on gene expression | PLOS genetics | 2014 | 574 | 301 | |||
| High risk population isolate reveals low frequency variants predisposing to intracranial aneurysms | PLOS genetics | 2014 | 545 | 242 | |||
| Non-CpG island promoter hypomethylation and miR-149 regulate the expression of SRPX2 in colorectal cancer | International journal of cancer | 2013 | 447 | 0 | |||
| Immune response is a personal matter | eLife | 2013 | 482 | 0 | |||
| Sex-stratified Genome-wide Association Studies Including 270,000 Individuals Show Sexual Dimorphism in Genetic Loci for Anthropometric Traits | PLOS genetics | 2013 | 525 | 279 | |||
| Cell-type, allelic and genetic signatures in the human pancreatic beta cell transcriptome | Genome research | 2013 | 710 | 520 | |||
| Passive and active DNA methylation and the interplay with genetic variation in gene regulation | eLife | 2013 | 775 | 531 | |||
| Expression quantitative trait loci: present and future | Philosophical transactions - Royal Society. Biological sciences | 2013 | 498 | 0 | |||
| Transcriptome and genome sequencing uncovers functional variation in humans | Nature | 2013 | 722 | 3 | |||
| Examination of the relationship between variation at 17q21 and childhood wheeze phenotypes | Journal of allergy and clinical immunology | 2013 | 452 | 0 | |||
| Coordinated effects of sequence variation on DNA binding, chromatin structure, and transcription | Science | 2013 | 545 | 1 | |||
| Congruence of Additive and Non-Additive Effects on Gene Expression Estimated from Pedigree and SNP Data | PLOS genetics | 2013 | 510 | 343 | |||
| Gene expression changes with age in skin, adipose tissue, blood and brain | GenomeBiology.com | 2013 | 591 | 353 | |||
| Integrative annotation of variants from 1092 humans: application to cancer genomics | Science | 2013 | 478 | 1 | |||
| Reproducibility of high-throughput mRNA and small RNA sequencing across laboratories | Nature biotechnology | 2013 | 634 | 1 | |||
| Genetic and epigenetic regulation of human lincRNA gene expression | American journal of human genetics | 2013 | 677 | 0 | |||
| Mapping cis- and trans-regulatory effects across multiple tissues in twins | Nature genetics | 2012 | 687 | 999 | |||
| Meta-analysis of genome-wide association studies identifies three new risk loci for atopic dermatitis | Nature genetics | 2012 | 698 | 1,618 | |||
| Tandem repeat sequence variation as causative cis-eQTLs for protein-coding gene expression variation: the case of CSTB | Human mutation | 2012 | 594 | 0 | |||
| BLUEPRINT to decode the epigenetic signature written in blood | Nature biotechnology | 2012 | 537 | 1 | |||
| A systematic survey of loss-of-function variants in human protein-coding genes | Science | 2012 | 1,103 | 1,059 | |||
| Genetic control of gene expression in whole blood and lymphoblastoid cell lines is largely independent | Genome research | 2012 | 680 | 553 | |||
| Genotype-based test in mapping cis-regulatory variants from allele-specific expression data | PloS one | 2012 | 690 | 446 | |||
| Patterns of cis regulatory variation in diverse human populations | PLOS genetics | 2012 | 652 | 327 | |||
| Epigenome-wide scans identify differentially methylated regions for age and age-related phenotypes in a healthy ageing population | PLOS genetics | 2012 | 728 | 447 | |||
| Insights into hominid evolution from the gorilla genome sequence | Nature | 2012 | 782 | 1,180 | |||
| Cellular genomics for complex traits | Nature reviews. Genetics | 2012 | 621 | 1 | |||
| Analysis of case-control association studies with known risk variants | Bioinformatics | 2012 | 651 | 869 | |||
| Extent, causes, and consequences of small RNA expression variation in human adipose tissue | PLOS genetics | 2012 | 693 | 391 | |||
| Genomic variation and its impact on gene expression in Drosophila melanogaster | PLOS genetics | 2012 | 664 | 330 | |||
| Extensive natural variation for cellular hydrogen peroxide release is genetically controlled | PloS one | 2012 | 759 | 475 | |||
| Sex-biased genetic effects on gene regulation in humans | Genome research | 2012 | 568 | 361 | |||
| Genetic and epigenetic contribution to complex traits | Human molecular genetics | 2012 | 583 | 338 | |||
| An integrated map of genetic variation from 1,092 human genomes | Nature | 2012 | 1,054 | 737 | |||
| The Brisbane Systems Genetics Study: genetical genomics meets complex trait genetics | PloS one | 2012 | 692 | 422 | |||
| Rare and common regulatory variation in population-scale sequenced human genomes | PLOS genetics | 2011 | 674 | 370 | |||
| Consanguineous marriages, pearls and perils: Geneva International Consanguinity Workshop Report | Genetics in medicine | 2011 | 659 | 2 | |||
| Genome-wide association study identifies a common variant associated with risk of endometrial cancer | Nature genetics | 2011 | 764 | 1,016 | |||
| Genome-sequencing anniversary. Genome literacy | Science | 2011 | 493 | 490 | |||
| Identification of cis- and trans-regulatory variation modulating microRNA expression levels in human fibroblasts | Genome research | 2011 | 733 | 356 | |||
| Identification of an imprinted master trans regulator at the KLF14 locus related to multiple metabolic phenotypes | Nature genetics | 2011 | 811 | 1,142 | |||
| From expression QTLs to personalized transcriptomics | Nature reviews. Genetics | 2011 | 573 | 1 | |||
| The architecture of gene regulatory variation across multiple human tissues: the MuTHER study | PLOS genetics | 2011 | 672 | 329 | |||
| Genome-wide association identifies nine common variants associated with fasting proinsulin levels and provides new insights into the pathophysiology of type 2 diabetes | Diabetes | 2011 | 688 | 1,570 | |||
| Epistatic selection between coding and regulatory variation in human evolution and disease | American journal of human genetics | 2011 | 599 | 316 | |||
| A map of human genome variation from population-scale sequencing | Nature | 2010 | 1,029 | 1,416 | |||
| Meta-analysis of three genome-wide association studies identifies susceptibility loci for colorectal cancer at 1q41, 3q26.2, 12q13.13 and 20q13.33 | Nature genetics | 2010 | 623 | 2 | |||
| Transcriptome genetics using second generation sequencing in a Caucasian population | Nature | 2010 | 638 | 0 | |||
| Integrating common and rare genetic variation in diverse human populations | Nature | 2010 | 745 | 455 | |||
| Candidate causal regulatory effects by integration of expression QTLs with complex trait genetic associations | PLOS genetics | 2010 | 576 | 1,088 | |||
| High-throughput analysis of candidate imprinted genes and allele-specific gene expression in the human term placenta | BMC genetics | 2010 | 650 | 471 | |||
| Evolutionary history of regulatory variation in human populations | Human molecular genetics | 2010 | 595 | 1 | |||
| Long- and short-term selective forces on malaria parasite genomes | PLOS genetics | 2010 | 617 | 542 | |||
| Genome-wide association study of migraine implicates a common susceptibility variant on 8q22.1 | Nature genetics | 2010 | 631 | 720 | |||
| Independent and population-specific association of risk variants at the IRGM locus with Crohn's disease | Human molecular genetics | 2010 | 594 | 0 | |||
| Data analysis issues for allele-specific expression using Illumina's GoldenGate assay | BMC bioinformatics | 2010 | 666 | 364 | |||
| An immune response network associated with blood lipid levels | PLOS genetics | 2010 | 780 | 758 | |||
| Genevar: a database and Java application for the analysis and visualization of SNP-gene associations in eQTL studies | Bioinformatics | 2010 | 691 | 0 | |||
| Distinct clinical phenotypes associated with JAK2V617F reflect differential STAT1 signaling | Cancer cell | 2010 | 655 | 770 | |||
| The resolution of the genetics of gene expression | Human molecular genetics | 2009 | 572 | 3 | |||
| Common regulatory variation impacts gene expression in a cell type-dependent manner | Science | 2009 | 683 | 2 | |||
| Genetic variation of regulatory systems | Current opinion in genetics & development | 2009 | 564 | 0 | |||
| Genetics. Life after GWA studies | Science | 2009 | 691 | 0 | |||
| A genome-wide association study of testicular germ cell tumor | Nature genetics | 2009 | 635 | 0 | |||
| Gene expression levels are a target of recent natural selection in the human genome | Molecular biology and evolution | 2009 | 606 | 0 | |||
| Meta-analysis of genome-wide scans for human adult stature identifies novel Loci and associations with measures of skeletal frame size | PLOS genetics | 2009 | 1,088 | 370 | |||
| Using gene expression to investigate the genetic basis of complex disorders | Human molecular genetics | 2008 | 580 | 0 | |||
| From gene expression to disease risk | Nature genetics | 2008 | 601 | 1 | |||
| Assaying the regulatory potential of mammalian conserved non-coding sequences in human cells | GenomeBiology.com | 2008 | 662 | 436 | |||
| Regulatory variation and evolution: implications for disease | Advances in genetics | 2008 | 484 | 0 | |||
| High-resolution mapping of expression-QTLs yields insight into human gene regulation | PLOS genetics | 2008 | 662 | 324 | |||
| Large-scale population study of human cell lines indicates that dosage compensation is virtually complete | PLOS genetics | 2008 | 629 | 311 | |||
| The functional impact of structural variation in humans | Trends in genetics | 2008 | 582 | 0 | |||
| Genetic analysis of human traits in vitro: drug response and gene expression in lymphoblastoid cell lines | PLOS genetics | 2008 | 537 | 368 | |||
| Williams-Beuren syndrome TRIM50 encodes an E3 ubiquitin ligase | European journal of human genetics | 2008 | 638 | 0 | |||
| Modifier effects between regulatory and protein-coding variation | PLOS genetics | 2008 | 596 | 314 | |||
| Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project | Nature | 2007 | 712 | 656 | |||
| Conserved noncoding sequences are selectively constrained and not mutation cold spots | Nature genetics | 2006 | 698 | 0 | |||
| Tandem chimerism as a means to increase protein complexity in the human genome | Genome research | 2006 | 618 | 0 | |||
| Gene expression variation and expression quantitative trait mapping of human chromosome 21 genes | Human molecular genetics | 2005 | 606 | 0 | |||
| Evolutionary comparison provides evidence for pathogenicity of RMRP mutations | PLOS genetics | 2005 | 640 | 506 | |||
| Conserved non-genic sequences - an unexpected feature of mammalian genomes | Nature reviews. Genetics | 2005 | 568 | 0 | |||
| Complex haplotypes, copy number polymorphisms and coding variation in two recently divergent mouse strains | Nature genetics | 2005 | 609 | 0 | |||
| Polymorphisms in the low-density lipoprotein receptor-related protein 5 (LRP5) gene are associated with variation in vertebral bone mass, vertebral bone size, and stature in whites | American journal of human genetics | 2004 | 579 | 0 | |||
| Chromosome 21 and down syndrome: from genomics to pathophysiology | Nature reviews. Genetics | 2004 | 794 | 0 | |||
| Comparison of human chromosome 21 conserved nongenic sequences (CNGs) with the mouse and dog genomes shows that their selective constraint is independent of their genic environment | Genome research | 2004 | 614 | 0 | |||
| Comparison of mouse and human genomes followed by experimental verification yields an estimated 1,019 additional genes | Proceedings of the National Academy of Sciences of the United States of America | 2003 | 679 | 0 | |||
| Evolutionary discrimination of mammalian conserved non-genic sequences (CNGs) | Science | 2003 | 645 | 0 | |||
| Chromosome 21 and Down syndrome: the post-sequence era | Cold Spring Harbor Symposia on Quantitative Biology | 2003 | 570 | 0 | |||
| Numerous potentially functional but non-genic conserved sequences on human chromosome 21 | Nature | 2002 | 610 | 0 | |||
| Initial sequencing and comparative analysis of the mouse genome | Nature | 2002 | 807 | 6 | |||
| Human chromosome 21 gene expression atlas in the mouse | Nature | 2002 | 625 | 0 |
