EK
| Title | Published in | Access level | OA Policy | Year | Views | Downloads | |
|---|---|---|---|---|---|---|---|
| OrthoDB v11: annotation of orthologs in the widest sampling of organismal diversity | Nucleic acids research |  | 2023 | 110 | 803 | ||
| OrthoDB v10: sampling the diversity of animal, plant, fungal, protist, bacterial and viral genomes for evolutionary and functional annotations of orthologs | Nucleic Acids Research | | 2019 | 489 | 431 | ||
| ACI-1 beta-lactamase is widespread across human gut microbiomes in Negativicutes due to transposons harboured by tailed prophages | Environmental Microbiology |  | 2018 | 345 | 0 | ||
| OrthoDB v9.1: cataloging evolutionary and functional annotations for animal, fungal, plant, archaeal, bacterial and viral orthologs | Nucleic acids research | | 2017 | 1,020 | 331 | ||
| BUSCO applications from quality assessments to gene prediction and phylogenomics | Molecular Biology and Evolution | | 2017 | 524 | 0 | ||
| OrthoDB v8: update of the hierarchical catalog of orthologs and the underlying free software | Nucleic acids research | | 2015 | 714 | 473 | ||
| BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs | Bioinformatics | | 2015 | 756 | 0 | ||
| The common marmoset genome provides insight into primate biology and evolution | Nature genetics | | 2014 | 561 | 315 | ||
| Social insect genomes exhibit dramatic evolution in gene composition and regulation while preserving regulatory features linked to sociality | Genome research | | 2013 | 683 | 1 | ||
| OrthoDB: a hierarchical catalog of animal, fungal and bacterial orthologs | Nucleic acids research | | 2013 | 783 | 0 | ||
| Toward community standards in the quest for orthologs | Bioinformatics | | 2012 | 540 | 0 | ||
| The ecoresponsive genome of Daphnia pulex | Science | | 2011 | 1,035 | 1 | ||
| OrthoDB: the hierarchical catalog of eukaryotic orthologs in 2011 | Nucleic acids research | | 2011 | 687 | 0 | ||
| Correlating traits of gene retention, sequence divergence, duplicability and essentiality in vertebrates, arthropods, and fungi | Genome biology and evolution | | 2011 | 684 | 0 | ||
| Genome sequences of the human body louse and its primary endosymbiont provide insights into the permanent parasitic lifestyle | Proceedings of the National Academy of Sciences of the United States of America | | 2010 | 585 | 1 | ||
| Comparative Genome Analysis | Bioinformatics: A Swiss Perspective | 2009 | 1,045 | 0 | |||
| The bovine lactation genome: insights into the evolution of mammalian milk | GenomeBiology.com | | 2009 | 671 | 370 | ||
| miROrtho: computational survey of microRNA genes | Nucleic acids research | | 2009 | 698 | 320 | ||
| Mapping of small RNAs in the human ENCODE regions | American journal of human genetics | | 2008 | 621 | 0 | ||
| OrthoDB: the hierarchical catalog of eukaryotic orthologs | Nucleic acids research | | 2008 | 670 | 536 | ||
| AnoEST: toward A. gambiae functional genomics | Genome research | | 2005 | 677 | 418 | ||
| Interactive InterPro-based comparisons of proteins in whole genomes | Bioinformatics | | 2002 | 646 | 0 | ||
| CluSTr: a database of clusters of SWISS-PROT+TrEMBL proteins | Nucleic acids research | | 2001 | 694 | 0 | ||
| Proteome Analysis Database: online application of InterPro and CluSTr for the functional classification of proteins in whole genomes | Nucleic acids research | | 2001 | 568 | 0 |
