| A metagenomics method for the quantitative detection of bacterial pathogens causing hospital-associated and ventilator-associated pneumonia | Microbiology spectrum |  | | 2023 | 91 | 139 |
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| From genotype to antibiotic susceptibility phenotype in the order Enterobacterales: a clinical perspective | Clinical Microbiology and Infection |  | | 2020 | 414 | 1 |
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| Messages from the third international conference on clinical metagenomics (ICCMg3) | Microbes and Infection | | | 2019 | 298 | 0 |
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| The intestinal microbiota predisposes to traveler's diarrhea and to the carriage of multidrug-resistant enterobacteriaceae after traveling to tropical regions | Gut microbes | | | 2019 | 311 | 419 |
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| Molecular characterization of fluoroquinolones, macrolides, and imipenem resistance in Haemophilus influenzae: analysis of the mutations in QRDRs and assessment of the extent of the AcrAB-TolC-mediated resistance | European Journal of Clinical Microbiology & Infectious Diseases | | | 2018 | 405 | 0 |
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| When Bacterial Culture Fails, Metagenomics Can Help: A Case of Chronic Hepatic Brucelloma Assessed by Next-Generation Sequencing | Frontiers in Microbiology | | | 2018 | 524 | 319 |
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| In vivo selection of a multidrug-resistant Aeromonas salmonicida during medicinal leech therapy | New Microbes and New Infections | | | 2018 | 1,575 | 0 |
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| Clinical Metagenomics for the Diagnostic of Hospital-acquired Infections: Promises and Hurdles | American Journal of Respiratory and Critical Care Medicine | | | 2017 | 453 | 6 |
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| Clonal or not clonal? Investigating hospital outbreaks of KPC-producing Klebsiella pneumoniae with whole-genome sequencing | Clinical Microbiology and Infection | | | 2017 | 537 | 1 |
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| Clinical metagenomics of bone and joint infections: a proof of concept study | Scientific Reports | | | 2017 | 618 | 506 |
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| Establishing Genotype-to-Phenotype Relationships in Bacteria Causing Hospital-Acquired Pneumonia: A Prelude to the Application of Clinical Metagenomics | Antibiotics | | | 2017 | 424 | 371 |
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| Messages from the first International Conference on Clinical Metagenomics (ICCMg) | Microbes and Infection | | | 2017 | 459 | 797 |
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| Detection of Bacterial Pathogens from Broncho-Alveolar Lavage by Next-Generation Sequencing | International Journal of Molecular Sciences | | | 2017 | 477 | 441 |
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| In 2035, will all bacteria be multidrug resistant? We are not sure | Intensive care medicine | | | 2016 | 537 | 0 |
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| Clinical metagenomics for the management of hospital- and healthcare-acquired pneumonia | Future Microbiology | | | 2016 | 522 | 0 |
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| High prevalence of the arginine catabolic mobile element in carriage isolates of methicillin-resistant Staphylococcus epidermidis | The journal of antimicrobial chemotherapy | | | 2011 | 574 | 0 |
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| Methicillin-resistant coagulase-negative staphylococci in the community: high homology of SCCmec IVa between Staphylococcus epidermidis and major clones of methicillin-resistant Staphylococcus aureus | The Journal of infectious diseases | | | 2010 | 719 | 0 |
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