UNIGE document Chapitre d'actes
previous document  unige:45266  next document
add to browser collection
Title

ToxiCat: Hybrid Named Entity Recognition services to support curation of the Comparative Toxicogenomic Database

Authors
Published in Proceedings of the Fourth BioCreative Challenge Evaluation Workshop. Bethesda, Maryland, USA - October 7-9 - [S. l. : s. n.]. 2013, p. 108-113
Abstract We report on the original implementation of named entity recognition (NER) modules based on an automatic text categorization pipeline, so-called ToxiCat (Toxicogenomic Categorizer), developed to perform biomedical documents classification and prioritization for the previous Biocreative campaign in order to speed up the curation of the Comparative Toxicogenomics Database (CTD). ToxiCat NER modules are a group of components that analyse text for enclosed information. These modules are based on an information retrieval engine for MEDLINE (EAGLi), a gene normalization (GN) service (NormaGene) developed for a previous BioCreative campaign, gene ontology categorizer (GOCat) and finally an entity recognizer for diseases and chemicals. The NER services are publically available as RESTful web services at http://pingu.unige.ch:8080/Toxicat.
Full text
Structures
Research group Interfaces Homme-machine en milieu clinique (610)
Citation
(ISO format)
VISHNYAKOVA, Dina et al. ToxiCat: Hybrid Named Entity Recognition services to support curation of the Comparative Toxicogenomic Database. In: Proceedings of the Fourth BioCreative Challenge Evaluation Workshop. Bethesda, Maryland, USA. [s.l.] : [S. l. : s. n.], 2013. p. 108-113. https://archive-ouverte.unige.ch/unige:45266

194 hits

54 downloads

Update

Deposited on : 2015-01-14

Export document
Format :
Citation style :