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Scientific article
Open access
English

Recent improvements to the PROSITE database

Published inNucleic acids research, vol. 32, no. Database issue, p. D134-137
Publication date2004
Abstract

The PROSITE database consists of a large collection of biologically meaningful signatures that are described as patterns or profiles. Each signature is linked to documentation that provides useful biological information on the protein family, domain or functional site identified by the signature. The PROSITE web page has been redesigned and several tools have been implemented to help the user discover new conserved regions in their own proteins and to visualize domain arrangements. We also introduced the facility to search PDB with a PROSITE entry or a user's pattern and visualize matched positions on 3D structures. The latest version of PROSITE (release 18.17 of November 30, 2003) contains 1676 entries. The database is accessible at http://www.expasy.org/prosite/.

Keywords
  • Amino Acid Motifs
  • Animals
  • Computational Biology
  • Conserved Sequence
  • Databases, Protein
  • Humans
  • Internet
  • Models, Molecular
  • Protein Structure, Tertiary
  • Proteins/chemistry/metabolism
  • Quality Control
  • Sequence Alignment
  • Structure-Activity Relationship
Citation (ISO format)
HULO, Nicolas et al. Recent improvements to the PROSITE database. In: Nucleic acids research, 2004, vol. 32, n° Database issue, p. D134–137. doi: 10.1093/nar/gkh044
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Article (Published version)
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ISSN of the journal0305-1048
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Technical informations

Creation08/08/2014 10:04:00 AM
First validation08/08/2014 10:04:00 AM
Update time03/30/2023 10:26:08 AM
Status update03/30/2023 10:26:08 AM
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