en
Scientific article
English

In vitro transcription of a TATA-less promoter: negative regulation by the Not1 protein

Published inBiological chemistry, vol. 380, no. 12, p. 1365-1370
Publication date1999
Abstract

Genetic experiments in the yeast Saccharomyces cerevisiae have identified the five Not proteins as global repressors of transcription which preferentially repress core promoters which do not contain a canonical TATA sequence. Recently, the Ccr4 and Caf1 proteins, required for non-fermentative gene expression, were found to be associated with the five Not proteins in 1.2 and 2 MDa Ccr4-Not complexes. These Ccr4-Not complexes, as many other global regulators of transcription, appear to regulate transcription both positively and negatively in vivo. To further characterize the activity of Not1p, the only essential known protein of the Ccr4-Not complex, and determine whether it can act directly as a transcriptional repressor, we established an in vitro transcription system in which the HIS3 TATA-less promoter can be efficiently transcribed. We demonstrate that transcription from the HIS3 TATA-less promoter can be specifically increased in vitro by preparing nuclear extracts from a conditional mutant of the NOT1 gene and analyzing transcription after shifting the nuclear extracts to the restrictive temperature. This result is the first demonstration that one of the Not proteins directly represses transcription. Moreover, it now defines an experimental system in which TATA-less transcription initiation and repression by the Ccr4-Not complex can be studied further.

Keywords
  • Base Sequence
  • Cell Cycle Proteins/physiology
  • DNA Primers
  • Fungal Proteins/genetics/physiology
  • Gene Expression Regulation/physiology
  • Hydro-Lyases/genetics
  • Promoter Regions, Genetic/physiology
  • Saccharomyces cerevisiae/genetics
  • Saccharomyces cerevisiae Proteins
  • TATA Box
  • Transcription Factors/physiology
  • Transcription, Genetic/physiology
Funding
  • Swiss National Science Foundation - 31-39690.93
  • Swiss National Science Foundation - 31-49808.96
Citation (ISO format)
OBERHOLZER, Ursula, COLLART, Martine. In vitro transcription of a TATA-less promoter: negative regulation by the Not1 protein. In: Biological chemistry, 1999, vol. 380, n° 12, p. 1365–1370. doi: 10.1515/BC.1999.176
Main files (1)
Article (Published version)
accessLevelRestricted
Identifiers
ISSN of the journal1431-6730
575views
0downloads

Technical informations

Creation10/01/2013 11:59:00 AM
First validation10/01/2013 11:59:00 AM
Update time03/14/2023 8:31:34 PM
Status update03/14/2023 8:31:34 PM
Last indexation01/16/2024 7:48:28 AM
All rights reserved by Archive ouverte UNIGE and the University of GenevaunigeBlack