Conflict, drought and locusts are leading concerns for African food security but the relative importance and spatiotemporal scale of crises resulting from each hazard is poorly characterized. Here we use continuous, subnational data to demonstrate that the rise of food insecurity across sub-Saharan Africa that began in 2014 is attributable to an increase in violent conflict, particularly in South Sudan and Nigeria. Although drought remains a leading trigger of food crises, the prevalence of drought-related crises did not increase from 2009 to 2018. When exposed to drought, pastoralists experienced more widespread, severe and long-lasting food crises than people living in agricultural zones. Food insecurity remained elevated in pastoral regions for 2 years following a drought, while agricultural regions returned to pre-drought food-security levels in ~12 months. The few confirmed famines during the 2009-2018 period coincided with both conflict and drought, while locusts had little effect on food security during this period.