Bathymetric changes have been experimentally shown to affect the occurrence of rogue waves. We recently derived a non-homogeneous correction to the spectral analysis, allowing us to describe the evolution of the rogue wave probability over a shoal. Here, we extend this work to the evolution of the excess kurtosis of the surface elevation, that plays a central role in estimating rare event probabilities. Furthermore, we provide an upper bound to the excess kurtosis. In intermediate and deep water regimes, a shoal does not affect wave steepness nor bandwidth significantly, so that the vertical asymmetry between crests and troughs, the excess kurtosis and the exceedance probability of wave height stay rather constant. In contrast, in shallower water, a sharp increase in wave steepness increases the vertical asymmetry, resulting in a growth of both the tail of the exceedance probability and the excess kurtosis.