en
Scientific article
Open access
English

Analytical Sensitivity of Eight Different SARS-CoV-2 Antigen-Detecting Rapid Tests for Omicron-BA.1 Variant

Published inMicrobiology spectrum, vol. 10, no. 4, e0085322
Publication date2022-08-31
First online date2022-08-08
Abstract

The emergence of each novel SARS-CoV-2 variant of concern (VOC) requires investigation of its potential impact on the performance of diagnostic tests in use, including antigen-detecting rapid diagnostic tests (Ag-RDTs). Although anecdotal reports have been circulating that the newly emerged Omicron-BA.1 variant is in principle detectable by Ag-RDTs, few data on sensitivity are available. We have performed (i) analytical sensitivity testing with cultured virus in eight Ag-RDTs and (ii) retrospective testing in duplicates with clinical samples from vaccinated individuals with Omicron-BA.1 (n = 59) or Delta (n = 54) breakthrough infection on seven Ag-RDTs. Overall, in our analytical study we have found heterogenicity between Ag-RDTs for detecting Omicron-BA.1. When using cultured virus, we observed a trend toward lower endpoint sensitivity for Omicron-BA.1 detection than for earlier circulating SARS-CoV-2 and the other VOCs. In our retrospective study, the detection of Delta and Omicron-BA.1 was assessed in a comparable set of stored clinical samples using seven Ag-RDTs. Four hundred ninety-seven of all 826 tests (60.17%) performed on Omicron-BA.1 samples were positive, compared to 489/756 (64.68%) for Delta samples. In the analytical study, the sensitivity for both Omicron-BA.1 and Delta between the Ag-RDTs was variable. All seven Ag-RDTs showed comparable sensitivities to detect Omicron-BA.1 and Delta in the retrospective study.

IMPORTANCE: Sensitivity for detecting Omicron-BA.1 shows high heterogenicity between Ag-RDTs, necessitating a careful consideration when using these tests to guide infection prevention measures. Analytical and retrospective testing is a proxy and timely solution to generate rapid performance data, but it is not a replacement for clinical evaluations, which are urgently needed. Biological and technical reasons for detection failure by some Ag-RDTs need to be further investigated.

eng
Keywords
  • COVID-19
  • Omicron variant
  • Omicron-BA.1 variant
  • SARS-CoV-2
  • Antigen-detecting rapid diagnostic tests
  • Variants of concern
  • COVID-19 / diagnosis
  • Humans
  • Retrospective Studies
  • SARS-CoV-2 / genetics
  • Sensitivity and Specificity
Citation (ISO format)
BEKLIZ, Meriem et al. Analytical Sensitivity of Eight Different SARS-CoV-2 Antigen-Detecting Rapid Tests for Omicron-BA.1 Variant. In: Microbiology spectrum, 2022, vol. 10, n° 4, p. e0085322. doi: 10.1128/spectrum.00853-22
Main files (1)
Article (Published version)
Secondary files (1)
Identifiers
ISSN of the journal2165-0497
123views
68downloads

Technical informations

Creation10/07/2022 10:01:00 AM
First validation10/07/2022 10:01:00 AM
Update time03/16/2023 10:33:47 AM
Status update03/16/2023 10:33:46 AM
Last indexation05/06/2024 3:19:28 PM
All rights reserved by Archive ouverte UNIGE and the University of GenevaunigeBlack