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Scientific article
Open access
English

The CTPase activity of ParB determines the size and dynamics of prokaryotic DNA partition complexes

Published inMolecular cell, vol. 81, no. 19, p. 3992-4007.e10
Publication date2021-09-18
First online date2021-09-18
Abstract

ParB-like CTPases mediate the segregation of bacterial chromosomes and low-copy number plasmids. They act as DNA-sliding clamps that are loaded at parS motifs in the centromere of target DNA molecules and spread laterally to form large nucleoprotein complexes serving as docking points for the DNA segregation machinery. Here, we solve crystal structures of ParB in the pre- and post-hydrolysis state and illuminate the catalytic mechanism of nucleotide hydrolysis. Moreover, we identify conformational changes that underlie the CTP- and parS-dependent closure of ParB clamps. The study of CTPase-deficient ParB variants reveals that CTP hydrolysis serves to limit the sliding time of ParB clamps and thus drives the establishment of a well-defined ParB diffusion gradient across the centromere whose dynamics are critical for DNA segregation. These findings clarify the role of the ParB CTPase cycle in partition complex assembly and function and thus advance our understanding of this prototypic CTP-dependent molecular switch.

eng
Keywords
  • Myxococcus xanthus
  • NTPase
  • ParA
  • ParB-like nuclease domain
  • ParB/Srx domain
  • ParB/sulfiredoxin domain
  • Nucleotide hydrolysis
  • Nucleotide-binding protein
  • Nucleotide-binding site
  • Water wire
Citation (ISO format)
OSORIO-VALERIANO, Manuel et al. The CTPase activity of ParB determines the size and dynamics of prokaryotic DNA partition complexes. In: Molecular cell, 2021, vol. 81, n° 19, p. 3992–4007.e10. doi: 10.1016/j.molcel.2021.09.004
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Identifiers
ISSN of the journal1097-2765
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Creation09/26/2021 11:18:00 AM
First validation09/26/2021 11:18:00 AM
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