Scientific article
English

Antibiotic degradation by commensal microbes shields pathogens

Published inInfection and Immunity, vol. 88, no. 4, p. e00012-00020
Publication date2020
Abstract

The complex bacterial populations that constitute the gut microbiota can harbor antibiotic resistance genes (ARGs), including those encoding β-lactamase enzymes (BLA), which degrade commonly prescribed antibiotics such as ampicillin. The prevalence of such genes in commensal bacteria has been increased in recent years by the wide use of antibiotics in human populations and in livestock. While transfer of ARGs between bacterial species has well-established dramatic public health implications, these genes can also function in trans within bacterial consortia, where antibiotic-resistant bacteria can provide antibiotic-sensitive neighbors with leaky protection from drugs, as shown both in vitro and in vivo, in models of lung and subcutaneous coinfection. However, whether the expression of ARGs by harmless commensal bacterial species can destroy antibiotics in the intestinal lumen and shield antibiotic-sensitive pathogens is unknown. To address this question, we colonized germfree or wild-type mice with a model intestinal commensal strain of Escherichia coli that produces either functional or defective BLA. Mice were subsequently infected with Listeria monocytogenes or Clostridioides difficile, followed by treatment with oral ampicillin. The production of functional BLA by commensal E. coli markedly reduced clearance of these pathogens and enhanced systemic dissemination during ampicillin treatment. Pathogen resistance was independent of ARG acquisition via horizontal gene transfer but instead relied on antibiotic degradation in the intestinal lumen by BLA. We conclude that commensal bacteria that have acquired ARGs can mediate shielding of pathogens from the bactericidal effects of antibiotics.

Keywords
  • Ampicillin/administration & dosage/metabolism/pharmacology
  • Animals
  • Anti-Bacterial Agents/administration & dosage/metabolism/pharmacology
  • Clostridium difficile/drug effects/growth & development
  • Drug Resistance
  • Bacterial
  • Escherichia coli/enzymology/growth & development/metabolism
  • Hydrolysis
  • Intestines/microbiology
  • Listeria monocytogenes/drug effects
  • Mice
  • Microbial Interactions
  • Microbial Viability/drug effects
  • Beta-Lactamases/metabolism
Affiliation entities Not a UNIGE publication
Citation (ISO format)
GJONBALAJ, Mergim et al. Antibiotic degradation by commensal microbes shields pathogens. In: Infection and Immunity, 2020, vol. 88, n° 4, p. e00012–00020. doi: 10.1128/IAI.00012-20
Main files (1)
Article (Published version)
accessLevelRestricted
Identifiers
Journal ISSN0019-9567
392views
5downloads

Technical informations

Creation11/11/2020 12:24:00
First validation11/11/2020 12:24:00
Update time15/03/2023 23:22:34
Status update15/03/2023 23:22:33
Last indexation07/10/2025 22:05:51
All rights reserved by Archive ouverte UNIGE and the University of GenevaunigeBlack