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Scientific article
English

Phigaro: high-throughput prophage sequence annotation

Published inBioinformatics, vol. 36, no. 12, p. 3882-3884
Publication date2020
Abstract

Phigaro is a standalone command-line application that is able to detect prophage regions taking raw genome and metagenome assemblies as an input. It also produces dynamic annotated 'prophage genome maps' and marks possible transposon insertion spots inside prophages. It is applicable for mining prophage regions from large metagenomic datasets.

Citation (ISO format)
STARIKOVA, Elizaveta V et al. Phigaro: high-throughput prophage sequence annotation. In: Bioinformatics, 2020, vol. 36, n° 12, p. 3882–3884. doi: 10.1093/bioinformatics/btaa250
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ISSN of the journal1367-4803
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