The neXtProt peptide uniqueness checker: a tool for the proteomics community

Schaeffer, Mathieu; Gateau, Alain; Teixeira, Daniel; Michel, Pierre-André Albert; Zahn, Monique; Lane, Lydie

doi:10.1093/bioinformatics/btx318

Scientific article

English

The neXtProt peptide uniqueness checker: a tool for the proteomics community

ContributorsSchaeffer, Mathieu; Gateau, Alain; Teixeira, Daniel; Michel, Pierre-André Albert; Zahn, Monique; Lane, Lydie

Published inBioinformatics, vol. 33, no. 21, p. 3471-3472

Publication date2017

Abstract

The neXtProt peptide uniqueness checker allows scientists to define which peptides can be used to validate the existence of human proteins, i.e. map uniquely versus multiply to human protein sequences taking into account isobaric substitutions, alternative splicing and single amino acid variants.

Keywords

Databases
Protein
Humans
Peptides/analysis
Proteins/analysis
Proteomics/methods
Software

Affiliation entities

Faculté de médecine / Section de médecine fondamentale / Département de microbiologie et médecine moléculaire

Research groups

Calipho (80)

Citation (ISO format)

SCHAEFFER, Mathieu et al. The neXtProt peptide uniqueness checker: a tool for the proteomics community. In: Bioinformatics, 2017, vol. 33, n° 21, p. 3471–3472. doi: 10.1093/bioinformatics/btx318

Article (Published version)

CC BY-NC

Identifiers

PID : unige:124371
DOI : 10.1093/bioinformatics/btx318
PMID : 28520855

Journal ISSN1367-4803

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111downloads

Creation14/10/2019 16:41:00

First validation14/10/2019 16:41:00

Update time15/03/2023 18:10:36

Status update15/03/2023 18:10:36

Last indexation31/10/2024 16:32:31

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The neXtProt peptide uniqueness checker: a tool for the proteomics community

The neXtProt peptide uniqueness checker allows scientists to define which peptides can be used to validate the existence of human proteins, i.e. map uniquely versus multiply to human protein sequences taking into account isobaric substitutions, alternative splicing and single amino acid variants.

Technical informations