Molecular evolutionary trends and feeding ecology diversification in the Hemiptera, anchored by the milkweed bug genome

Panfilio, Kristen A; Vargas Jentzsch, Iris M; Benoit, Joshua B; Erezyilmaz, Deniz; Suzuki, Yuichiro; Colella, Stefano; Robertson, Hugh M; Poelchau, Monica F; Waterhouse, Robert; Ioannidis, Panagiotis; Weirauch, Matthew T; Hughes, Daniel S T; Murali, Shwetha C; Werren, John H; Jacobs, Chris G C; Duncan, Elizabeth J; Armisén, David; Vreede, Barbara M I; Baa-Puyoulet, Patrice; Berger, Chloé S; Chang, Chun-Che; Chao, Hsu; Chen, Mei-Ju M; Chen, Yen-Ta; Childers, Christopher P; Chipman, Ariel D; Cridge, Andrew G; Crumière, Antonin J J; Dearden, Peter K; Didion, Elise M; Dinh, Huyen; Doddapaneni, Harsha Vardhan; Dolan, Amanda; Dugan, Shannon; Extavour, Cassandra G; Febvay, Gérard; Friedrich, Markus; Ginzburg, Neta; Han, Yi; Heger, Peter; Holmes, Christopher J; Horn, Thorsten; Hsiao, Yi-Min; Jennings, Emily C; Johnston, J Spencer; Jones, Tamsin E; Jones, Jeffery W; Khila, Abderrahman; Koelzer, Stefan; Kovacova, Viera; Leask, Megan; Lee, Sandra L; Lee, Chien-Yueh; Lovegrove, Mackenzie R; Lu, Hsiao-Ling; Lu, Yong; Moore, Patricia J; Munoz-Torres, Monica C; Muzny, Donna M; Palli, Subba R; Parisot, Nicolas; Pick, Leslie; Porter, Megan L; Qu, Jiaxin; Refki, Peter N; Richter, Rose; Rivera-Pomar, Rolando; Rosendale, Andrew J; Roth, Siegfried; Sachs, Lena; Santos, M Emília; Seibert, Jan; Sghaier, Essia; Shukla, Jayendra N; Stancliffe, Richard J; Tidswell, Olivia; Traverso, Lucila; van der Zee, Maurijn; Viala, Séverine; Worley, Kim C; Zdobnov, Evgeny; Gibbs, Richard A; Richards, Stephen

doi:10.1186/s13059-019-1660-0

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Title		Molecular evolutionary trends and feeding ecology diversification in the Hemiptera, anchored by the milkweed bug genome
Authors		Panfilio, Kristen A Vargas Jentzsch, Iris M Benoit, Joshua B Erezyilmaz, Deniz Suzuki, Yuichiro Colella, Stefano Robertson, Hugh M Poelchau, Monica F Waterhouse, Robert Ioannidis, Panagiotis Weirauch, Matthew T Hughes, Daniel S T Murali, Shwetha C Werren, John H Jacobs, Chris G C Duncan, Elizabeth J Armisén, David Vreede, Barbara M I Baa-Puyoulet, Patrice Berger, Chloé S Chang, Chun-Che Chao, Hsu Chen, Mei-Ju M Chen, Yen-Ta Childers, Christopher P Chipman, Ariel D Cridge, Andrew G Crumière, Antonin J J Dearden, Peter K Didion, Elise M Dinh, Huyen Doddapaneni, Harsha Vardhan Dolan, Amanda Dugan, Shannon Extavour, Cassandra G Febvay, Gérard Friedrich, Markus Ginzburg, Neta Han, Yi Heger, Peter Holmes, Christopher J Horn, Thorsten Hsiao, Yi-Min Jennings, Emily C Johnston, J Spencer Jones, Tamsin E Jones, Jeffery W Khila, Abderrahman Koelzer, Stefan Kovacova, Viera Leask, Megan Lee, Sandra L Lee, Chien-Yueh Lovegrove, Mackenzie R Lu, Hsiao-Ling Lu, Yong Moore, Patricia J Munoz-Torres, Monica C Muzny, Donna M Palli, Subba R Parisot, Nicolas Pick, Leslie Porter, Megan L Qu, Jiaxin Refki, Peter N Richter, Rose Rivera-Pomar, Rolando Rosendale, Andrew J Roth, Siegfried Sachs, Lena Santos, M Emília Seibert, Jan Sghaier, Essia Shukla, Jayendra N Stancliffe, Richard J Tidswell, Olivia Traverso, Lucila van der Zee, Maurijn Viala, Séverine Worley, Kim C Zdobnov, Evgeny Gibbs, Richard A Richards, Stephen show all authors [1 - 83]
Published in		GenomeBiology.com. 2019, vol. 20, no. 1, 64
Abstract		The Hemiptera (aphids, cicadas, and true bugs) are a key insect order, with high diversity for feeding ecology and excellent experimental tractability for molecular genetics. Building upon recent sequencing of hemipteran pests such as phloem-feeding aphids and blood-feeding bed bugs, we present the genome sequence and comparative analyses centered on the milkweed bug Oncopeltus fasciatus, a seed feeder of the family Lygaeidae.
Keywords		Amino Acid Sequence — Animals — CYS2-HIS2 Zinc Fingers — Evolution — Molecular — Feeding Behavior — Gene Dosage — Gene Expression Profiling — Gene Transfer — Horizontal — Genes — Homeobox — Genome — Insect — Hemiptera/genetics/growth & development/metabolism — Pigmentation/genetics — Smell — Transcription Factors/genetics
Identifiers		DOI: 10.1186/s13059-019-1660-0 PMID: 30935422
Full text		Article (Published version) (4.8 MB) - Free access
Structures		Faculté de médecine / Section de médecine fondamentale / Département de médecine génétique et développement Centres et instituts / Centre universitaire de bioinformatique
Research group		Génomique Evolutionnaire Computationnelle (830)
Projects		Swiss National Science Foundation: 31003A_143936 Swiss National Science Foundation: PP00P3_170664
Citation (ISO format)		PANFILIO, Kristen A et al. Molecular evolutionary trends and feeding ecology diversification in the Hemiptera, anchored by the milkweed bug genome. In: Genome Biology, 2019, vol. 20, n° 1, p. 64. doi: 10.1186/s13059-019-1660-0 https://archive-ouverte.unige.ch/unige:123160