UNIGE document Scientific Article
previous document  unige:1055  next document
add to browser collection

A DNA resequencing array for pathogenic mutation detection in hypertrophic cardiomyopathy

Perrot, Andreas
Osterziel, Karl Josef
Geier, Christian
show hidden authors show all authors [1 - 14]
Published in Human mutation. 2008, vol. 29, no. 6, p. 879-85
Abstract Hypertrophic cardiomyopathy (HCM) is a heterogeneous autosomal dominant cardiac disorder with a prevalence of 1 in 500. Over 450 different pathogenic mutations in at least 16 genes have been identified so far. The large allelic and genetic heterogeneity of HCM requires high-throughput, rapid, and affordable mutation detection technologies to efficiently integrate molecular screening into clinical practice. We developed a custom DNA resequencing array that contains both strands of all coding exons (160), splice-site junctions, and 5'UTR regions of 12 genes that have been clearly implicated in HCM (MYH7, MYBPC3, TNNT2, TPM1, TNNI3, MYL3, MYL2, CSRP3, PLN, ACTC, TNNC1, and PRKAG2). We analyzed a first series of 38 unrelated patients with HCM (17 familial, 21 sporadic). A total of 953,306 bp across the 38 patients were sequenced with a mean nucleotide call rate of 96.92% (range: 93-99.9%). Pathogenic mutations (single nucleotide substitutions) in MYH7, MYBPC3, TNNI3, and MYL3 (six known and six novel) were identified in 60% (10/17) of familial HCM and 10% of sporadic cases (2/21). The high-throughput HCM resequencing array is the most rapid and cost-effective tool for molecular testing of HCM to date; it thus has considerable potential in diagnostic and predictive testing, and prognostic stratification.
Keywords Cardiomyopathy, Hypertrophic/diagnosis/geneticsCardiomyopathy, Hypertrophic, Familial/diagnosisDNA Mutational AnalysisHumansMutationOligonucleotide Array Sequence Analysis/economics/methods
PMID: 18409188
Full text
Article (Accepted version) (227 Kb) - document accessible for UNIGE members only Limited access to UNIGE
Research groups Biologie du myocarde (22)
L'athérosclérose et ses complications cliniques (591)
L'hypertension pulmonaire (pédiatrie) (228)
Pathologie Moléculaire de la Trisomie 21 et le Génome Humain (248)
Ultrasonographie et pathologies neurovasculaires (700)
(ISO format)
FOKSTUEN, Siv et al. A DNA resequencing array for pathogenic mutation detection in hypertrophic cardiomyopathy. In: Human mutation, 2008, vol. 29, n° 6, p. 879-85. doi: 10.1002/humu.20749 https://archive-ouverte.unige.ch/unige:1055

582 hits

0 download


Deposited on : 2009-03-03

Export document
Format :
Citation style :