Gavin Perrin, Anne-Claude

Title	Published in	Year	Views	Downloads
The protein carriers of hundreds of lipids have been identified	Nature	2026	29	0
Systematic analyses of lipid mobilization by human lipid transfer proteins	Nature	2026	63	3
Interleukin-18 binding protein deficiency results in gut microbiota dysbiosis and aggravated diet-induced MASH in mice	JHEP reports	2026	39	42
Special Issue on Women in Proteomics	Molecular & cellular proteomics	2026	20	59
Accumulation of Lymphoid Progenitors with Defective B Cell Differentiation and of Putative Natural Killer Progenitors in Aging Human Bone Marrow	International journal of molecular sciences	2025	17	26
A Senescent Cluster in Aged Human Hematopoietic Stem Cell Compartment as Target for Senotherapy	International journal of molecular sciences	2025	19	18
Isoform- and cell-state-specific APOE homeostasis and function	Neural Regeneration Research	2024	111	109
Development of Genetically Encoded Fluorescent KSR1-Based Probes to Track Ceramides during Phagocytosis	International journal of molecular sciences	2024	149	102
A Membrane-Assisted Mechanism for the Release of Ceramide from the CERT START Domain	The journal of physical chemistry. B	2024	102	91
Membrane specificity of the human cholesterol transfer protein STARD4	Journal of Molecular Biology	2024	102	240
CLICK-chemoproteomics and molecular dynamics simulation reveals pregnenolone targets and their binding conformations in Th2 cells	Frontiers in immunology	2023	78	184
Structure and regulation of the myotonic dystrophy kinase-related Cdc42-binding kinase	Structure	2023	94	108
Differential intracellular management of fatty acids impacts on metabolic stress-stimulated glucose uptake in cardiomyocytes	Scientific reports	2023	220	128
Isoform- and cell-state-specific lipidation of ApoE in astrocytes	Cell reports	2022	412	425
Glucose metabolism and aging of hematopoietic stem and progenitor cells	International journal of molecular sciences	2022	327	308
In vitro and in cellulo ApoE particle formation, isolation, and characterization	STAR protocols	2022	129	106
APOE2, E3, and E4 differentially modulate cellular homeostasis, cholesterol metabolism, and inflammatory response in isogenic iPSC-derived astrocytes	Stem cell reports	2022	337	323
Coupling proteomics and metabolomics for the unsupervised identification of protein–metabolite interactions in Chaetomium thermophilum	PloS one	2021	186	234
CLICK-enabled analogues reveal pregnenolone interactomes in cancer and immune cells	iScience	2021	235	171
Glycogen accumulation, central carbon metabolism, and aging of hematopoietic stem and progenitor cells	Scientific Reports	2020	211	61
Structures of three MORN repeat proteins and a re-evaluation of the proposed lipid-binding properties of MORN repeats	PLOS ONE	2020	203	118
Structural insights and activating mutations in diverse pathologies define mechanisms of deregulation for phospholipase C gamma enzymes	EBioMedicine	2020	223	120
Dynamic buffering of extracellular chemokine by a dedicated scavenger pathway enables robust adaptation during directed tissue migration	Developmental Cell	2020	208	0
Identification of metabolites from tandem mass spectra with a machine learning approach utilizing structural features	Bioinformatics	2019	403	595
Cell-specific proteome analyses of human bone marrow reveal molecular features of age-dependent functional decline	Nature Communications	2018	393	301
Impact of spliceosome mutations on RNA splicing in myelodysplasia: dysregulated genes/pathways and clinical associations	Blood	2018	468	1
Effects of acetylation and phosphorylation on subunit interactions in three large eukaryotic complexes	Molecular and Cellular Proteomics	2018	299	139
Cell metabolism regulates integrin mechanosensing via an SLC3A2-dependent sphingolipid biosynthesis pathway	Nature Communications	2018	416	277
Enzymatic complexes across scales	Essays in Biochemistry	2018	332	272
Capturing protein communities by structural proteomics in a thermophilic eukaryote	Molecular Systems Biology	2017	382	346
Structural and functional dissection of the DH and PH domains of oncogenic Bcr-Abl tyrosine kinase	Nature Communications	2017	386	274
Systematic identification of phosphorylation-mediated protein interaction switches	PLOS Computational Biology	2017	326	238
Bifunctional sphingosine for cell-based analysis of protein-sphingolipid interactions	ACS Chemical Biology	2016	390	3
The orchestra of lipid-transfer proteins at the crossroads between metabolism and signaling	Progress in Lipid Research	2016	308	537
A protocol for the systematic and quantitative measurement of protein-lipid interactions using the liposome-microarray-based assay	Nature Protocols	2016	389	2
Integration of multi-omics data of a genome-reduced bacterium: Prevalence of post-transcriptional regulation and its correlation with protein abundances	Nucleic Acids Research	2016	400	222
PRL-3 disrupts epithelial architecture by altering the post-mitotic midbody position	Journal of Cell Science	2016	345	234
Quantitative human cell encyclopedia	Science Signaling	2016	313	0
Lipid cooperativity as a general membrane-recruitment principle for PH domains	Cell Reports	2015	225	136
Mechismo: predicting the mechanistic impact of mutations and modifications on molecular interactions	Nucleic Acids Research	2015	195	166
The deca-GX3 proteins Yae1-Lto1 function as adaptors recruiting the ABC protein Rli1 for iron-sulfur cluster insertion	eLife	2015	215	239
The systematic analysis of protein–lipid interactions comes of age	Nature Reviews Molecular Cell Biology	2015	190	0
A conserved circular network of coregulated lipids modulates innate immune responses	Cell	2015	183	203
Defining a minimal cell: essentiality of small ORFs and ncRNAs in a genome-reduced bacterium	Molecular Systems Biology	2015	182	196
Quantitative mass spectrometry of posttranslational modifications: keys to confidence	Science Signaling	2015	158	0
Structure of the Kti11/Kti13 heterodimer and its double role in modifications of tRNA and eukaryotic elongation factor 2	Structure	2015	163	119
An integrated approach for genome annotation of the eukaryotic thermophile Chaetomium thermophilum	Nucleic Acids Research	2014	192	194
Keystone symposia: proteomics and bioinformatics and systems and biology	Expert review of proteomics	2014	143	0
A quantitative liposome microarray to systematically characterize protein-lipid interactions	Nature Methods	2014	149	1
A generic protocol for the purification and characterization of water-soluble complexes of affinity-tagged proteins and lipids	Nature Protocols	2014	162	0
Modules, networks and systems medicine for understanding disease and aiding diagnosis	Genome Medicine	2014	221	195
Detection and characterization of protein interactions in vivo by a simple live-cell imaging method	PLOS ONE	2013	214	166
Network Biology editorial 2013	Molecular Biosystems	2013	139	0
Characterization of drug‐induced transcriptional modules: towards drug repositioning and functional understanding	Molecular Systems Biology	2013	175	174
Interactome map uncovers phosphatidylserine transport by oxysterol-binding proteins	Nature	2013	186	0
Systematic identification of proteins that elicit drug side effects	Molecular Systems Biology	2013	165	150
Structural and functional characterization of a phosphatase domain within yeast general transcription factor IIIC	Journal of Biological Chemistry	2013	178	0
In vivo profiling and visualization of cellular protein-lipid interactions using bifunctional fatty acids	Angewandte Chemie: International Edition	2013	166	0
Structural analyses of the Slm1-PH domain demonstrate ligand binding in the non-canonical site	PLOS ONE	2012	173	106
Cross‐talk between phosphorylation and lysine acetylation in a genome‐reduced bacterium	Molecular Systems Biology	2012	183	158
Cell type–specific chromatin immunoprecipitation from multicellular complex samples using BiTS-ChIP	Nature Protocols	2012	161	0
Transcription start site associated RNAs in bacteria	Molecular Systems Biology	2012	154	97
Deciphering a global network of functionally associated post‐translational modifications	Molecular Systems Biology	2012	233	148
Quantification of mRNA and protein and integration with protein turnover in a bacterium	Molecular Systems Biology	2011	167	252
Snapshot: protein-protein interaction networks	Cell	2011	162	217
Mass spectrometry reveals stable modules in holo and apo RNA polymerases I and III	Structure	2011	239	124
Recent advances in charting protein–protein interaction: mass spectrometry-based approaches	Current Opinion in Biotechnology	2011	147	0
Visualization of omics data for systems biology	Nature Methods	2010	225	0
Visualizing biological data—now and in the future	Nature Methods	2010	165	0
A systematic screen for protein–lipid interactions in Saccharomyces cerevisiae	Molecular Systems Biology	2010	172	204
3rd US-EU workshop: systems level understanding of DNA damage responses	Mutation Research - Fundamental and Molecular Mechanisms of Mutagenesis	2010	170	0
Transcriptome complexity in a genome-reduced bacterium	Science	2009	150	0
Proteome organization in a genome-reduced bacterium	Science	2009	164	0
Impact of genome reduction on bacterial metabolism and its regulation	Science	2009	167	0
Meeting report on the 7th World congress of the human proteome organization (HUPO) in Amsterdam	Molecular and Cellular Proteomics	2008	155	67
The social network of a cell: recent advances in interactome mapping	Biotechnology annual review	2008	141	0
Interaction networks for systems biology	FEBS Letters	2008	154	0
Drug target identification using side-effect similarity	Science	2008	168	0
The minimum information required for reporting a molecular interaction experiment (MIMIx)	Nature biotechnology	2007	243	0
Towards quantitative analysis of proteome dynamics	Nature biotechnology	2007	158	1
New perspectives on an old disease: proteomics in cancer research	Genome biology	2007	154	103
Casein kinase 2-dependent serine phosphorylation of MuSK regulates acetylcholine receptor aggregation at the neuromuscular junction	Genes & development	2006	147	0
Protein co-membership and biochemical affinity purifications	Drug discovery today. Technologies	2006	222	0
Expanding the frontiers in proteomics	Drug discovery today	2006	166	0
Structure-Based Assembly of Protein Complexes in Yeast	Science	2004	145	0
A physical and functional map of the human TNF-α/NF-κB signal transduction pathway	Nature cell biology	2004	222	0
Protein complexes and proteome organization from yeast to man	Current opinion in chemical biology	2003	243	0
A complex prediction: three‐dimensional model of the yeast exosome	EMBO reports	2002	133	0
Functional organization of the yeast proteome by systematic analysis of protein complexes	Nature	2002	194	0
90S Pre-Ribosomes Include the 35S Pre-rRNA, the U3 snoRNP, and 40S Subunit Processing Factors but Predominantly Lack 60S Synthesis Factors	Molecular cell	2002	292	624
A p90(rsk) mutant constitutively interacting with MAP kinase uncouples MAP kinase from p34(cdc2)/cyclin B activation in Xenopus oocytes	Molecular biology of the cell	1999	384	1
Regulation of human c-Abl tyrosine kinase activity in Xenopus oocytes and acceleration of progesterone-induced G2/M transition by oncogenic forms	Biological chemistry	1999	250	221
Cell Survival Demands Some Rsk	Science	1999	9	0
A MAP kinase docking site is required for phosphorylation and activation of p90rsk/MAPKAP kinase-1	Current biology	1999	253	114
A link between MAP kinase and p34cdc2/cyclin B during oocyte maturation: p90rsk phosphorylates and inactivates the p34cdc2 inhibitory kinase Myt1	The EMBO journal	1998	263	0
Ribosomal S6 kinase p90^rsk and mRNA cap-binding protein eIF4E phosphorylations correlate with MAP kinase activation during meiotic reinitiation of mouse oocytes	Molecular reproduction and development	1997	177	0
An accumulation of p34cdc2 at the end of mouse oocyte growth correlates with the acquisition of meiotic competence	Developmental biology	1996	516	2
Histone H1 kinase activity, germinal vesicle breakdown and M phase entry in mouse oocytes	Journal of cell science	1994	206	0
Okadaic acid and p13suc1 modulate the reinitiation of meiosis in mouse oocytes	Molecular reproduction and development	1992	571	0
Induction of M-phase entry of prophase-blocked mouse oocytes through microinjection of okadaic acid, a specific phosphatase inhibitor	Experimental cell research	1991	150	0
The interaction of lithium with forskolin-inhibited meiotic maturation of denuded mouse oocytes	Experimental cell research	1988	247	0