Département de botanique et biologie végétale

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2019

Scientific Articles

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dicranum scottianum Turner (Dicranaceae): synonyms, a type and the correct authorPrice, Michelle; Maier, Eva; Ellis, Leonard T.;
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A genetically validated approach to detect inorganic polyphosphates in plantsZhu, Jinsheng; Loubery, Sylvain Philippe; Broger, Larissa; Zhang, Youjun; ... Hothorn, Michael
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Chemo-diversification of plant extracts using a generic bromination reaction and monitoring by metabolite profilingRighi, Davide; Marcourt, Laurence; Koval, Alexey; Ducret, Verena; ... Ferreira Queiroz, Emerson
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Concerted expression of a cell cycle regulator and a metabolic enzyme from a bicistronic transcript in plantsLorenzo-Orts, Laura; Witthoeft, Janika; Deforges, Jules; Martinez Font, Jacobo; ... Hothorn, Michael
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Connecting data and expertise: a new alliance for biodiversity knowledgeHobern, Donald; Baptiste, Brigitte; Copas, Kyle; Guralnick, Robert; ... Wieczorek, John
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Crystal structure of the leucine-rich repeat ectodomain of the plant immune receptor kinase SOBIR1Hohmann, Ulrich; Hothorn, Michael;
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Crystal structure of the pseudoenzyme PDX1.2 in complex with its cognate enzyme PDX1.3: a total eclipseRobinson, Graham; Kaufmann, Markus; Roux, Céline; Martinez Font, Jacobo; ... Fitzpatrick, Thérésa Bridget
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Identity and functions of inorganic and inositol polyphosphates in plantsLorenzo-Orts, Laura; Couto, Daniel; Hothorn, Michael;
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Loss of NifQ Leads to Accumulation of Porphyrins and Altered Metal-Homeostasis in Nitrogen-Fixing SymbiosesSaad, Maged; Michalet, Sophie; Fossou, Romain; Putnik‐Delić, Marina; ... Perret, Xavier
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Mechanistic insights into the evolution of DUF26-containing proteins in land plantsVaattovaara, Aleksia; Brandt, Benjamin; Rajaraman, Sitaram; Safronov, Omid; ... Wrzaczek, Michael
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Molecular characterization of CHAD domains as inorganic polyphosphate-binding modulesLorenzo-Orts, Laura; Hohmann, Ulrich; Zhu, Jinsheng; Hothorn, Michael;
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Plant photoreceptors and their signaling components compete for COP1 binding via VP peptide motifsLau, Kelvin Ka Ching; Podolec, Roman; Chappuis, Richard; Ulm, Roman; Hothorn, Michael
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Two bifunctional inositol pyrophosphate kinases/phosphatases control plant phosphate homeostasisZhu, Jinsheng; Lau, Kelvin Ka Ching; Puschmann, Robert; Harmel, Robert K; ... Hothorn, Michael

Technical Reports

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National significance of natural history collections in Switzerland: archives and resources for modern scienceBeer, Christoph; Burckhardt, Daniel; Cibois, Alice; Gonseth, Yves; ... Tschudin, Pascal

Doctoral Thesis

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Biochemical and physiological studies on polyphosphate metabolism in plantsLorenzo-Orts, Laura;
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Étude du système symbiotique rhizobia-Cajanus cajan dans des champs cultivés en Côte d’IvoireFossou, Romain;
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Études écologiques et fonctionnelles de symbioses entre rhizobia et légumineusesCherni, Ala Eddine;
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Functional characterisation of rice put genes and biofortification of crops with enhanced levels of vitamin b1 and vitamin b6Fudge, Jared;
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Identification and characterization of chloroplast protein phosphatases involved in regulation of photosynthesis in Chlamydomonas reinhardtiiCariti, Federica;
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On the role of triphosphorylated thiamine compounds in Arabidopsis thalianaHofmann, Manuel;
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The role of embryonic photosynthesis in post-germination plant developmentSela, Ayala;
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Towards Synthesis of Minimal Plasmids for Symbiotic Nitrogen FixationUnay, Jovelyn;

2018

Scientific Articles

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Arabidopsis RUP2 represses UVR8-mediated flowering in noninductive photoperiodsArongaus, Adriana Beatriz; Chen, Song; Pireyre, Marie; Glöckner, Nina; ... Ulm, Roman
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CLERK is a novel receptor kinase required for sensing of root-active CLE peptides in ArabidopsisAnne, Pauline; Amiguet-Vercher, Amelia; Brandt, Benjamin; Kalmbach, Lothar; ... Hardtke, Christian S.
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Complete genome sequence of "Thiodictyon syntrophicum" sp. nov. strain Cad16T, a photolithoautotrophic purple sulfur bacterium isolated from the alpine meromictic Lake CadagnoLudin, Samuel; Pothier, Joël F.; Danza, Francesco; Storelli, Nicola; ... Tonolla, Mauro Amedeo
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Consortium of European Taxonomic Facilities (CETAF) best practices in electronic publishing in taxonomyBénichou, Laurence; Gérard, Isabelle; Laureys, Éric; Price, Michelle;
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Control of plant phosphate homeostasis by inositol pyrophosphates and the SPX domainJung, Ji-Yul; Ried, Martina; Hothorn, Michael; Poirier, Yves;
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Coping with 'Dark Sides of the Sun' through Photoreceptor SignalingDemarsy, Emilie; Goldschmidt-Clermont, Michel P.; Ulm, Roman;
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Investigation of temperature conditions in Swiss urban and suburban microhabitats for the overwintering suitability of diapausing Aedes albopictus eggsRavasi, Damiana; Guidi, Valeria; Flacio, Eleonora; Lüthy, Peter; ... Tonolla, Mauro Amedeo
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MacroH2A histone variants limit chromatin plasticity through two distinct mechanismsKozlowski, Marek; Corujo, David; Hothorn, Michael; Guberovic, Iva; ... Ladurner, Andreas G
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Marine and freshwater micropearls: biomineralization producing strontium-rich amorphous calcium carbonate inclusions is widespread in the genus Tetraselmis (Chlorophyta)Martignier, Agathe; Filella, Montserrat; Pollok, Kilian; Melkonian, Michael; ... Ariztegui, Daniel
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Mechanistic basis for the activation of plant membrane receptor kinases by SERK-family coreceptorsHohmann, Ulrich; Santiago Cuellar, Julia; Nicolet, Joël; Olsson, Vilde; ... Hothorn, Michael
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Nucleus-Encoded Protein BFA1 Promotes Efficient Assembly of the Chloroplast ATP Synthase Coupling Factor 1Zhang, Lin; Pu, Hua; Duan, Zhikun; Li, Yonghong; ... Peng, Lianwei
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Perception of Sunflecks by the UV-B Photoreceptor UV RESISTANCE LOCUS8Moriconi, Victoria; Binkert, Melanie; Costigliolo, Cecilia; Sellaro, Romina; ... Casal, Jorge J
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Photoreceptor-mediated regulation of the COP1/SPA E3 ubiquitin ligasePodolec, Roman; Ulm, Roman;
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Plastidial NAD-Dependent Malate Dehydrogenase: A Moonlighting Protein Involved in Early Chloroplast Development through Its Interaction with an FtsH12-FtsHi Protease ComplexSchreier, Tina B; Cléry, Antoine; Schläfli, Michael; Galbier, Florian; ... Kötting, Oliver
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Pseudomonas aeruginosa zinc homeostasis: Key issues for an opportunistic pathogenGonzalez, Manuel; Ducret, Verena; Leoni, Sara; Perron, Karl;
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Singlet oxygen-triggered chloroplast-to-nucleus retrograde signalling pathways: an emerging perspectiveDogra, Vivek; Rochaix, Jean-David; Kim, Chanhong;
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The disentanglement of Andreaea alpina Hedw. (Andreaeaceae): Typifications and nomenclatural changesPrice, Michelle; Ellis, Leonard T.;
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The Physcomitrella patens chromosome-scale assembly reveals moss genome structure and evolutionLang, Daniel; Ullrich, Kristian K; Murat, Florent; Fuchs, Jörg; ... Rensing, Stefan A
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The SERK3 elongated allele defines a role for BIR ectodomains in brassinosteroid signallingHohmann, Ulrich; Nicolet, Joël; Moretti, Andréa; Hothorn, Ludwig A.; Hothorn, Michael
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Transcriptome Analysis of Pseudomonas aeruginosa Cultured in Human Burn Wound ExudatesGonzalez, Manuel; Ducret, Verena; Leoni, Sara; Fleuchot, Betty; ... Perron, Karl
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Two hundred years in the dark: A type for the moss Encalypta crispataPrice, Michelle;

Books

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International Code of Nomenclature for algae, fungi, and plants (Shenzhen Code) adopted by the Nineteenth International Botanical Congress Shenzhen, China, July 2017Turland, N.J.; Wiersema, J.H.; Barrie, F.R.; Greuter, W.; ... Smith, G.F.

Book Chapters

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Brassinosteroid Sensing and Signaling in PlantsHohmann, Ulrich; Hothorn, Michael;

Doctoral Thesis

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Flow cytometry as a tool to investigate the anoxygenic phototrophic sulfur bacteria coexistence in the chemocline of meromictic Lake CadagnoDanza, Francesco;
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Functional genomics of purple sulfur bacteria from Lake CadagnoLudin, Samuel; Tonolla, Mauro Amedeo;
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Mechanistic insight into the activation and negative regulation of plant leucine-rich repeat receptor kinasesHohmann, Ulrich;
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New role for Nucleosome Assembly Proteins (AtNAPs) in regulating hypocotyl growth and chlorophyll accumulation in Arabidopsis thalianaSkvortsova, Mariya;
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UV-B photoreceptor-mediated regulation of typical and atypical bHLH transcription regulatorsTavridou, Eleni;
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What can palm evolution in time and space say about the historical assembly of diversity in the Caribbean and Central America?Cano, Angela;

2017

Scientific Articles

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A Light Harvesting Complex-Like Protein in Maintenance of Photosynthetic Components in ChlamydomonasZhao, Lei; Cheng, Dongmei; Huang, Xiahe; Chen, Mei; ... Huang, Fang
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A revision of Grimmia (Grimmiaceae) from South Africa and LesothoMaier, Eva; Price, Michelle; Hedderson, Terry A.;
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Characterization of the Blue-Light-Activated Adenylyl Cyclase mPAC by Flash Photolysis and FTIR SpectroscopyKerruth, Silke; Langner, Pit; Raffelberg, Sarah; Gärtner, Wolfgang; Heberle, Joachim
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Comparison of transplastomic Chlamydomonas reinhardtii and Nicotiana tabacum expression system for the production of a bacterial endoglucanaseFaè, Matteo; Accossato, Sonia; Cella, Rino; Fontana, Fabrizia; ... Longoni, Paolo
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Cooling Down Thermomorphogenesis by UV-B SignalingYin, Ruohe;
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DNA sequence properties that predict susceptibility to epiallelic switchingCatoni, Marco; Griffiths, Jayne; Becker, Claude; Zabet, Nicolae Radu; ... Paszkowski, Jerzy
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Editorial overview: Biofortification of crops: achievements, future challenges, socio-economic, health and ethical aspectsVan Der Straeten, Dominique; Fitzpatrick, Thérésa Bridget; De Steur, Hans;
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Expression of the UVR8 photoreceptor in different tissues reveals tissue-autonomous features of UV-B signallingBernula, Péter; Crocco, Carlos; Arongaus, Adriana Beatriz; Ulm, Roman; ... Viczián, András
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How plants cope with UV-B: from perception to responseYin, Ruohe; Ulm, Roman;
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Perception of root-active CLE peptides requires CORYNE function in the phloem vasculatureHazak, Ora; Brandt, Benjamin; Cattaneo, Pietro; Santiago Cuellar, Julia; ... Hardtke, Christian S
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Phosphorylation of Arabidopsis MAP Kinase Phosphatase 1 (MKP1) Is Required for PAMP Responses and Resistance against BacteriaJiang, Lingyan; Anderson, Jeffrey C; Gonzalez Besteiro, Marina; Peck, Scott C;
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Rationalising vitamin B6 biofortification in crop plantsFudge, Jared; Mangel, Nathalie; Gruissem, Wilhelm; Vanderschuren, Hervé; Fitzpatrick, Thérésa Bridget
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The macro domain as fusion tag for carrier-driven crystallizationWild, Rebekka; Hothorn, Michael;
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The novel chloroplast outer membrane kinase KOC1 is a required component of the plastid protein import machineryZufferey, Mónica; Montandon, Cyrille; Douet, Véronique; Demarsy, Emilie; ... Kessler, Felix
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The Pseudoenzyme PDX1.2 Sustains Vitamin B6 Biosynthesis as a Function of Heat StressDell'Aglio, Elisa; Boycheva, Svetlana; Fitzpatrick, Thérésa Bridget;
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The Pyrenoid: An Overlooked Organelle Comes out of AgeRochaix, Jean-David;
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The Structural Basis of Ligand Perception and Signal Activation by Receptor KinasesHohmann, Ulrich; Lau, Kelvin; Hothorn, Michael;
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UV-B Perceived by the UVR8 Photoreceptor Inhibits Plant ThermomorphogenesisHayes, Scott; Sharma, Ashutosh; Fraser, Donald P; Trevisan, Martine; ... Franklin, Keara A
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Vitamin B1 diversity and characterization of biosynthesis genes in cassavaMangel, Nathalie; Fudge, Jared; Fitzpatrick, Thérésa Bridget; Gruissem, Wilhelm; Vanderschuren, Hervé

Newspaper Articles

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Communication avec le grand public: la parole aux microbiologistesGreub, Gilbert; Perron, Karl;

Book Chapters

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UV-B signal transduction from photoperception to responseBinkert, Melanie; Ulm, Roman;

Doctoral Thesis

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From virulence to persistence: role of an aspartyl protease maturing secretory proteins in Toxoplasma gondiiHammoudi, Pierre-Mehdi;
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New insights on the role of RUP2 as negative regulator of UV-B photoreceptor signaling in Arabidopsis thalianaArongaus, Adriana Beatriz;

2016

Scientific Articles

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A Nucleus-Encoded Chloroplast Phosphoprotein Governs Expression of the Photosystem I Subunit PsaC in Chlamydomonas reinhardtiiDouchi, Damien; Qu, Yujiao; Longoni, Paolo; Legendre Lefebvre, Linnka; ... Goldschmidt-Clermont, Michel P.
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A photoreceptor's on-off switchFankhauser, Christian; Ulm, Roman;
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A pioneer protein is part of a large complex involved in trans-splicing of a group II intron in the chloroplast of Chlamydomonas reinhardtiiLegendre Lefebvre, Linnka; Reifschneider, Olga; Kollipara, Laxmikanth; Sickmann, Albert; ... Goldschmidt-Clermont, Michel P.
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Activation of the Stt7/STN7 Kinase through Dynamic Interactions with the Cytochrome b6f ComplexShapiguzov, Alexey; Chai, Xin; Fucile, Geoffrey; Longoni, Paolo; ... Rochaix, Jean-David
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Anti-Microbial Dendrimers against Multidrug-Resistant P. aeruginosa Enhance the Angiogenic Effect of Biological Burn-wound BandagesAbdel-Sayed, Philippe; Kaeppli, Ariane; Siriwardena, Thissa; Darbre, Tamis; ... Applegate, Lee Ann
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Balancing of B6 vitamers is essential for plant development and metabolism in ArabidopsisColinas Martinez, Maite Felicitas; Eisenhut, Marion; Tohge, Takayuki; Pesquera-Alonso, Marta; ... Fitzpatrick, Thérésa Bridget
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Chemoselective Dimerization of PhosphatesHofer, Alexandre; Marques, Elia; Kieliger, Nicole; Gatter, Sarah-Kirsten N; ... Jessen, Henning J
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Chloroplast retrograde signal regulates floweringFeng, Peiqiang; Guo, Hailong; Chi, Wei; Chai, Xin; ... Zhang, Lixin
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Control of eukaryotic phosphate homeostasis by inositol polyphosphate sensor domainsWild, Rebekka; Gerasimaite, Ruta; Jung, Ji-Yul; Truffault, Vincent; ... Mayer, Andreas
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COP1 is required for UV-B-induced nuclear accumulation of the UVR8 photoreceptorYin, Ruohe; Skvortsova, Mariya; Loubery, Sylvain Philippe; Ulm, Roman;
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DEG9, a serine protease, modulates cytokinin and light signaling by regulating the level of ARABIDOPSIS RESPONSE REGULATOR 4Chi, Wei; Li, Jing; He, Baoye; Chai, Xin; ... Zhang, Lixin
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Effect of Human Burn Wound Exudate on Pseudomonas aeruginosa VirulenceGonzalez, Manuel; Fleuchot, Betty; Lauciello, Leonardo; Jafari, Paris; ... Perron, Karl
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In silico driven design and synthesis of rhodanine derivatives as novel antibacterials targeting the enoyl reductase InhASlepikas, Liudas; Chiriano, Gianpaolo; Perozzo, Remo; Tardy, Sébastien; ... Scapozza, Leonardo
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Interaction between vitamin B6 metabolism, nitrogen metabolism and autoimmunityColinas Martinez, Maite Felicitas; Fitzpatrick, Thérésa Bridget;
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Long-Distance Transport of Thiamine (Vitamin B1) Is Concomitant with That of PolyaminesMartinis, Jacopo; Gas Pascual, Elisabet; Szydlowski, Nicolas; Crèvecoeur, Michèle; ... Fitzpatrick, Thérésa Bridget
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Loss of algal Proton Gradient Regulation 5 increases reactive oxygen species scavenging and H2 evolutionChen, Mei; Zhang, Jin; Zhao, Lei; Xing, Jiale; ... Huang, Fang
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Mechanistic insight into a peptide hormone signaling complex mediating floral organ abscissionSantiago Cuellar, Julia; Brandt, Benjamin; Wildhagen, Mari; Hohmann, Ulrich; ... Hothorn, Michael
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OprD Repression upon Metal Treatment Requires the RNA Chaperone Hfq in Pseudomonas aeruginosaDucret, Verena; Gonzalez, Manuel; Scrignari, Tiziana; Perron, Karl;
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Primary seed dormancy: a temporally multilayered riddle waiting to be unlockedChahtane, Hicham; Kim, Woohyun; Lopez Molina, Luis;
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Proposals to provide for registration of new names and nomenclatural actsBarkworth, Mary E.; Watson, Mark; Barrie, Fred R.; Belyaeva, Irina V.; ... Zuccarello, Giuseppe C.
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Report of the Special Committee on Registration of Algal and Plant Names (including fossils)Barkworth, Mary E.; Watson, Mark; Barrie, Fred R.; Belyaeva, Irina V.; ... Zuccarello, Giuseppe C.
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