Département de botanique et biologie végétale

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2016

Scientific Articles

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A Nucleus-Encoded Chloroplast Phosphoprotein Governs Expression of the Photosystem I Subunit PsaC in Chlamydomonas reinhardtiiDouchi, Damien; Qu, Yujiao; Longoni, Paolo; Legendre Lefebvre, Linnka; ... Goldschmidt-Clermont, Michel P.
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A pioneer protein is part of a large complex involved in trans-splicing of a group II intron in the chloroplast of Chlamydomonas reinhardtiiLegendre Lefebvre, Linnka; Reifschneider, Olga; Kollipara, Laxmikanth; Sickmann, Albert; ... Goldschmidt-Clermont, Michel P.
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Anti-Microbial Dendrimers against Multidrug-Resistant P. aeruginosa Enhance the Angiogenic Effect of Biological Burn-wound BandagesAbdel-Sayed, Philippe; Kaeppli, Ariane; Siriwardena, Thissa; Darbre, Tamis; ... Applegate, Lee Ann
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Balancing of B6 vitamers is essential for plant development and metabolism in ArabidopsisColinas Martinez, Maite Felicitas; Eisenhut, Marion; Tohge, Takayuki; Pesquera-Alonso, Marta; ... Fitzpatrick, Thérésa Bridget
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Chemoselective Dimerization of PhosphatesHofer, Alexandre; Marques, Elia; Kieliger, Nicole; Gatter, Sarah-Kirsten N; ... Jessen, Henning J
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Control of eukaryotic phosphate homeostasis by inositol polyphosphate sensor domainsWild, Rebekka; Gerasimaite, Ruta; Jung, Ji-Yul; Truffault, Vincent; ... Mayer, Andreas
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COP1 is required for UV-B-induced nuclear accumulation of the UVR8 photoreceptorYin, Ruohe; Skvortsova, Mariya; Loubery, Sylvain Philippe; Ulm, Roman;
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Effect of Human Burn Wound Exudate on Pseudomonas aeruginosa VirulenceGonzalez, Manuel; Fleuchot, Betty; Lauciello, Leonardo; Jafari, Paris; ... Perron, Karl
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In silico driven design and synthesis of rhodanine derivatives as novel antibacterials targeting the enoyl reductase InhASlepikas, Liudas; Chiriano, Gianpaolo; Perozzo, Remo; Tardy, Sébastien; ... Scapozza, Leonardo
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Interaction between vitamin B6 metabolism, nitrogen metabolism and autoimmunityColinas Martinez, Maite Felicitas; Fitzpatrick, Thérésa Bridget;
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Long-Distance Transport of Thiamine (Vitamin B1) Is Concomitant with That of PolyaminesMartinis, Jacopo; Gas Pascual, Elisabet; Szydlowski, Nicolas; Crèvecoeur, Michèle; ... Fitzpatrick, Thérésa Bridget
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Mechanistic insight into a peptide hormone signaling complex mediating floral organ abscissionSantiago Cuellar, Julia; Brandt, Benjamin; Wildhagen, Mari; Hohmann, Ulrich; ... Hothorn, Michael
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OprD Repression upon Metal Treatment Requires the RNA Chaperone Hfq in Pseudomonas aeruginosaDucret, Verena; Gonzalez, Manuel; Scrignari, Tiziana; Perron, Karl;
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Primary seed dormancy: a temporally multilayered riddle waiting to be unlockedChahtane, Hicham; Kim, Woohyun; Lopez Molina, Luis;
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Revisiting chromatin binding of the Arabidopsis UV-B photoreceptor UVR8Binkert, Melanie; Crocco, Carlos; Ekundayo, Babatunde; Lau, Kelvin; ... Ulm, Roman
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SERK co-receptor kinasesBrandt, Benjamin; Hothorn, Michael;
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Structural definition of the lysine swing in Arabidopsis thaliana PDX1: Intermediate channeling facilitating vitamin B6 biosynthesisRobinson, Graham; Kaufmann, Markus; Roux, Céline; Fitzpatrick, Thérésa Bridget;
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UV-B Perception and Acclimation in Chlamydomonas reinhardtiiTilbrook, Kimberley; Dubois-Barthelemy, Marine; Crocco, Carlos; Yin, Ruohe; ... Ulm, Roman
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UV-B photoreceptor-mediated protection of the photosynthetic machinery in Chlamydomonas reinhardtiiAllorent, Guillaume; Legendre Lefebvre, Linnka; Chappuis, Richard; Kuntz, Marcel; ... Goldschmidt-Clermont, Michel P.

Book Chapters

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Basic Techniques to Assess Seed Germination Responses to Abiotic Stress in Arabidopsis thalianaPiskurewicz, Urszula; Lopez Molina, Luis;

Doctoral Thesis

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Etude taxonomique et phylogéographique du groupe du Silene italica (Caryophyllaceae) en Méditerranée orientaleDu Pasquier, Pierre-Emmanuel;
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Molecular Characzerization of symbiotic Rhizobia and theri legume hosts in situ via Mass SpectrometryZiegler, Dominik;
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New steps toward understanding the regulation of photosystem i biogenesis in chlamydomonas reinhardtiiDouchi, Damien;
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Structural and functional characterization of eukaryotic SPX domains as inositol polyphosphate sensorsWild, Rebekka;

2015

Scientific Articles

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A 3D-DNA Molecule Made of PlayMaisCaine, Massimo; Horie, Ninon; Zuchuat, Sandrine; Weber, Aurélia; ... Perron, Karl
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A nucleus-encoded chloroplast protein regulated by iron availability governs expression of the photosystem I subunit PsaA in Chlamydomonas reinhardtiiLegendre Lefebvre, Linnka; Choquet, Yves Marcel; Kuras, Richard; Loubery, Sylvain Philippe; ... Goldschmidt-Clermont, Michel P.
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Abscisic acid transporters cooperate to control seed germinationKang, Joohyun; Yim, Sojeong; Choi, Hyunju; Kim, Areum; ... Lee, Youngsook
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An Endosperm-Associated Cuticle Is Required for Arabidopsis Seed Viability, Dormancy and Early Control of GerminationDe Giorgi, Julien; Piskurewicz, Urszula; Loubery, Sylvain Philippe; Utz-Pugin, Anne; ... Lopez Molina, Luis
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BiOutils: an interface to connect university laboratories with microbiology classes in schoolsCaine, Massimo; Zuchuat, Sandrine; Weber, Aurélia; Ducret, Verena; ... Perron, Karl
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Consequences of a deficit in vitamin B6 biosynthesis de novo for hormone homeostasis and root development in ArabidopsisBoycheva, Svetlana; Dominguez Laino, Ana; Rolcik, Jakub; Boller, Thomas Peter; Fitzpatrick, Thérésa Bridget
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Floristic Analyses of the Corsican Flora: Biogeographical Origin and EndemismJeanmonod, Daniel; Naciri, Yamama; Schlüssel, André; Gamisans, Jacques;
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Morphological analysis of the Silene gigantea complex (Caryophyllaceae) across the Balkan Peninsula, south-western Turkey and CyprusDu Pasquier, Pierre-Emmanuel; Naciri, Yamama; Jeanmonod, Daniel;
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Natures balancing act: examining biosynthesis de novo, recycling and processing damaged vitamin B metabolitesColinas Martinez, Maite Felicitas; Fitzpatrick, Thérésa Bridget;
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Notes à La Flore de Corse, XXVJeanmonod, Daniel;
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Phosphorylation of the Light-Harvesting Complex II Isoform Lhcb2 Is Central to State TransitionsLongoni, Paolo; Douchi, Damien; Cariti, Federica; Fucile, Geoffrey; Goldschmidt-Clermont, Michel P.
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Q&A: How do plants sense and respond to UV-B radiation?Ulm, Roman; Jenkins, Gareth I;
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Sharing light between two photosystems: mechanism of state transitionsGoldschmidt-Clermont, Michel P.; Bassi, Roberto;
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State transition7-dependent phosphorylation is modulated by changing environmental conditions, and its absence triggers remodeling of photosynthetic protein complexesBergner, Sonja Verena; Scholz, Martin; Trompelt, Kerstin; Barth, Johannes; ... Hippler, Michael
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Structural Determinants for Substrate Binding and Catalysis in Triphosphate Tunnel MetalloenzymesMartinez Font, Jacobo; Truffault, Vincent; Hothorn, Michael;
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Two distinct domains of the UVR8 photoreceptor interact with COP1 to initiate UV-B signaling in ArabidopsisYin, Ruohe; Arongaus, Adriana Beatriz; Binkert, Melanie; Ulm, Roman;

Professional Articles

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Increased bioavailable vitamin B6 in field-grown transgenic cassava for dietary sufficiencyLi, Kuan-Te; Moulin, Michael; Mangel, Nathalie; Albersen, Monique; ... Vanderschuren, Hervé

Doctoral Thesis

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Balancing B6 vitamers and the importance of PDX3 in Arabidopsis thalianaColinas Martinez, Maite Felicitas;
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Transcriptional regulators of the UV-B signaling pathway in Arabidopsis thalianaBinkert, Melanie;

2014

Scientific Articles

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A pathway for repair of NAD(P)H in plantsColinas Martinez, Maite Felicitas; Shaw, Holly Victoria; Loubery, Sylvain Philippe; Kaufmann, Markus; ... Fitzpatrick, Thérésa Bridget
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Complex behavior: from cannibalism to suicide in the vitamin B1 biosynthesis worldFitzpatrick, Thérésa Bridget; Thore, Stéphane;
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Conditional Depletion of the Chlamydomonas Chloroplast ClpP Protease Activates Nuclear Genes Involved in Autophagy and Plastid Protein Quality ControlRamundo, Silvia; Casero, David; Mühlhaus, Timo; Hemme, Dorothea; ... Rochaix, Jean-David
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Floral structure and development in the monoecious palm Gaussia attenuata (Arecaceae; Arecoideae)Castano, F.; Stauffer, Fred Walter; Marquinez, X.; Crèvecoeur, Michèle; ... Tregear, J.
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Floristic analyses of the Corsican flora: distribution in ecological compartments (vegetation belts, habitats and substrates)Schlüssel, André; Jeanmonod, Daniel; Gamisans, Jacques;
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Heat-induced release of epigenetic silencing reveals the concealed role of an imprinted plant geneSanchez, Diego; Paszkowski, Jerzy;
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Identification of genes preventing transgenerational transmission of stress-induced epigenetic statesIwasaki, Mayumi; Paszkowski, Jerzy;
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Isolation and biological activity of compounds from Garcinia preussiiBiloa Messi, Bernadette; Ho, Raimana; Meli Lannang, Alain; Cressend, Delphine; ... Cuendet Licea, Muriel
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Modulating reconstituted high density lipoprotein functionality to target the Pseudomonas aeruginosa quorum sensing systemDeakin, Sara Patricia; Ducret, Verena; Bioletto, Silvana; Perron, Karl; James, Richard William
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On the complexity of chloroplast RNA metabolism: psaA trans-splicing can be bypassed in chlamydomonasLegendre Lefebvre, Linnka; Merendino, Livia; Rivier, Cristian Pablo; Goldschmidt-Clermont, Michel P.;
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Photoreceptor-Mediated Bending towards UV-B in ArabidopsisVandenbussche, Filip; Tilbrook, Kimberley; Fierro, Ana Carolina; Marchal, Kathleen; ... Ulm, Roman
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Reverse pharmacology for developing an anti-malarial phytomedicine. The example of Argemone mexicanaSimoes Avello, Claudia; Hostettmann, Kurt; Haouala, Amina; Cuendet Licea, Muriel; ... Christen, Philippe
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Separation of membrane protein complexes by native LDS-PAGEArnold, Janine; Shapiguzov, Alexey; Fucile, Geoffrey; Rochaix, Jean-David; ... Eichacker, Lutz Andreas
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Short-term acclimation of the photosynthetic electron transfer chain to changing light: a mathematical modelEbenhöh, Oliver; Fucile, Geoffrey; Finazzi, Giovanni; Rochaix, Jean-David; Goldschmidt-Clermont, Michel P.
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Small RNAs reveal two target sites of the RNA-maturation factor Mbb1 in the chloroplast of ChlamydomonasLoizeau, Karen; Qu, Yujiao; Depp, Sébastien; Fiechter, Vincent; ... Goldschmidt-Clermont, Michel P.
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Sputum containing zinc enhances carbapenem resistance, biofilm formation and virulence of Pseudomonas aeruginosaMarguerettaz, Mélanie; Dieppois, Guennaelle; Que, Yok Ai; Ducret, Verena; ... Perron, Karl
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The pseudoenzyme PDX1.2 boosts vitamin B6 biosynthesis under heat and oxidative stress in ArabidopsisMoccand, Cyril; Boycheva, Svetlana; Surriabre Dick, Pedro Eduardo; Tambasco-Studart, Marina; ... Fitzpatrick, Thérésa Bridget
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The rise of operon-like gene clusters in plantsBoycheva, Svetlana; Daviet, Laurent; Wolfender, Jean-Luc; Fitzpatrick, Thérésa Bridget;
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UV-B-responsive association of the Arabidopsis bZIP transcription factor ELONGATED HYPOCOTYL5 with target genes, including its own promoterBinkert, Melanie; Kozma-Bognár, László; Terecskei, Kata; De Veylder, Lieven; ... Ulm, Roman

Doctoral Thesis

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Polar motility and cell cycle signaling pathways in Caulobacter crescentusSanselicio, Stefano;
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Regulation of vitamin B6 biosynthesis in Arabidopsis thalianaBoycheva, Svetlana;
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Role of phototrophic sulfur bacteria from the chemocline in the primary production of Lake CadagnoStorelli, Nicola;

2013

Scientific Articles

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A seed coat bedding assay to genetically explore in vitro how the endosperm controls seed germination in Arabidopsis thalianaLopez Molina, Luis; Lee, Keun Pyo;
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Analysis of Chlamydomonas thiamin metabolism in vivo reveals riboswitch plasticityMoulin, Michael; Nguyen, Ginnie T D T; Scaife, Mark A; Smith, Alison G; Fitzpatrick, Thérésa Bridget
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ATR and MKP1 play distinct roles in response to UV-B stress in ArabidopsisGonzalez Besteiro, Marina; Ulm, Roman;
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Constitutively active UVR8 photoreceptor variant in ArabidopsisHeijde, Marc; Binkert, Melanie; Yin, Ruohe; Ares-Orpel, Florence; ... Ulm, Roman
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Epigenetic Alterations at Genomic Loci Modified by Gene Targeting in Arabidopsis thalianaLieberman Lazarovich, Michal; Melamed-Bessudo, Cathy; de Pater, Sylvia; Levy, Avraham A.;
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Examining strategies to facilitate vitamin B1 biofortification of plants by genetic engineeringPourcel, Lucille; Moulin, Michael; Fitzpatrick, Thérésa Bridget;
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High-resolution crystal structure of the eukaryotic HMP-P synthase (THIC) from Arabidopsis thalianaCoquille, Sandrine Claire; Roux, Céline; Mehta, Angad; Begley, Tadhg P.; ... Thore, Stéphane
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Microarray Analysis of Microbiota of Gingival Lesions in Noma PatientsHuyghe, Antoine; Francois, Patrice; Mombelli, Andrea; Tangomo, Manuela; ... Schrenzel, Jacques
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Multi-chromatic control of mammalian gene expression and signalingMüller, Konrad; Engesser, Raphael; Schulz, Simon; Steinberg, Thorsten; ... Weber, Wilfried
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Parent-of-origin control of transgenerational retrotransposon proliferation in ArabidopsisReinders, Jon; Mirouze, Marie; Nicolet, Joël; Paszkowski, Jerzy;
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Phosphorylation and stabilization of Arabidopsis MAP kinase phosphatase 1 in response to UV-B stressGonzalez Besteiro, Marina; Ulm, Roman;
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Recycling of pyridoxine (vitamin B6) by PUP1 in ArabidopsisSzydlowski, Nicolas; Bürkle, Lukas; Pourcel, Lucille; Moulin, Michael; ... Fitzpatrick, Thérésa Bridget
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Reversion of the Arabidopsis UV-B photoreceptor UVR8 to the homodimeric ground stateHeijde, Marc; Ulm, Roman;
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Strategies for vitamin B6 biofortification of plants: a dual role as a micronutrient and a stress protectantVanderschuren, Hervé; Boycheva, Svetlana; Li, Kuan-Te; Szydlowski, Nicolas; ... Fitzpatrick, Thérésa Bridget
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The UVR8 UV-B Photoreceptor: Perception, Signaling and ResponseTilbrook, Kimberley; Arongaus, Adriana Beatriz; Binkert, Melanie; Heijde, Marc; ... Ulm, Roman
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Ultraviolet-B-mediated induction of protein-protein interactions in mammalian cellsCrefcoeur, Remco Paul; Yin, Ruohe; Ulm, Roman; Halazonetis, Thanos;

Doctoral Thesis

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Assessing the phenotypic and molecular impacts of merging different epigenomes in Arabidopsis thalianaDapp, Mélanie;
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Environmental and epigenetic mechanisms regulating a COPIA LTR retrotransposon during Heat Stress in Arabidopsis thalianaGaubert, Hervé;
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On the functionality and regulation of vitamin B6 biosynthesisMoccand, Cyril;
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Phylogeny and taxonomic treatment of the genus Mesoptychia (Lindb.) A. Evans (Marchantiophyta)Cailliau, Ariane;
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