Département de génétique et évolution

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2022

Scientific Articles

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From dietary adaptation in the past to drug metabolism of today: An example of NAT genes in the Croatian RomaStojanović Marković, Anita; Zajc Petranović, Matea; Škobalj, Marko; Poloni, Estella S.; ... Peričić Salihović, Marijana
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Generation of human islet cell type-specific identity genesetsVan Gurp, Léon; Fodoulian, Leon; Oropeza, Daniel; Furuyama, Kenichiro; ... Herrera, Pedro Luis
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Making the invisible visible: tracing the origins of plants in West African cuisine through archaeobotanical and organic residue analysisDunne, Julie; Höhn, Alexa; Neumann, Katharina; Franke, Gabriele; ... Evershed, Richard P.
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Preferential Involvement of BRCA1/BARD1, Not Tip60/Fe65, in DNA Double-Strand Break Repair in Presenilin-1 P117L Alzheimer ModelsMaciel Authiat, Marcella; Gruz-Gibelli, Emmanuelle; Colas, Julien; Bianchi, Estelle; ... Savioz, Armand
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Relationships Between Lipid Profiles and Use of Ethnographic Pottery: an Exploratory StudyDrieu, L.; Regert, M.; Mazuy, A.; Vieugué, J.; ... Mayor, Anne
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[Review of:] Mobile technologies in the ancient Sahara and beyondMayor, Anne;

Books

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Whole-Body Regeneration: Methods and ProtocolsBlanchoud, Simon; Galliot, Brigitte;

Book Chapters

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Combining RNAi-Mediated β-Catenin Inhibition and Reaggregation to Study Hydra Whole-Body RegenerationVogg, Matthias Christian; Galliot, Brigitte;
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Studying Stem Cell Biology in Intact and Whole-Body Regenerating Hydra by Flow CytometryBuzgariu, Wanda Christa; Aubry-Lachainaye, Jean-Pierre; Galliot, Brigitte;

Reports

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La grotte Agathe : Col des Deux Soeurs à Villars-de-Lans, 2050 mPicavet, Regis; Desideri, Jocelyne; Debard, Julie; Silvestre-Pottin, Damien;

2021

Scientific Articles

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A comment on estimating HLA haplotype frequencies from homozygous individualsNunes, Jose Manuel;
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A West African Middle Stone Age site dated to the beginning of MIS 5: Archaeology, chronology, and paleoenvironment of the Ravin Blanc I (eastern Senegal)Douze, Katja; Lespez, Laurent; Rasse, Michel; Tribolo, Chantal; ... Huysecom, Eric
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Agricultural diversification in West Africa: an archaeobotanical study of the site of Sadia (Dogon Country, Mali)Champion, Louis; Fuller, Dorian Q.; Ozainne, Sylvain; Huysecom, Eric; Mayor, Anne
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Air temperature influences early Covid-19 outbreak as indicated by worldwide mortalityQuilodran, Claudio; Currat, Mathias; Montoya Burgos, Juan Ignacio;
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Blood virosphere in febrile Tanzanian childrenCordey, Samuel; Laubscher, Florian; Hartley, Mary-Anne; Junier, Thomas; ... Kaiser, Laurent
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Cellular, Metabolic, and Developmental Dimensions of Whole-Body Regeneration in HydraVogg, Matthias; Buzgariu, Wanda Christa; Suknovic, Nenad Slavko; Galliot, Brigitte;
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Characterization of the Leucistic Texas Rat Snake Pantherophis obsoletusUllate Agote, Asier; Tzika, Athanasia;
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Demographic history was a formative mechanism of the genetic structure for the taste receptor TAS2R16 in human populations inhabiting Africa's Sahel/Savannah BeltKulichová, Iva; Mouterde, Médéric; Mokhtar, Mohammed G.; Diallo, Issa; ... Černý, Viktor
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Drug repurposing to identify a synergistic high-order drug combination to treat sunitinib-resistant renal cell carcinomaRausch, Magdalena; Rutz, Adriano; Allard, Pierre-Marie; Delucinge, Céline; ... Nowak-Sliwinska, Patrycja
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Food for everyone: Differential feeding habits of cryptic bat species inferred from DNA metabarcodingAndriollo, Tommy; Michaux, Johan R.; Rüedi, Manuel;
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Middle Stone Age Bifacial Technology and Pressure Flaking at the MIS 3 Site of Toumboura III, Eastern SenegalSchmid, Viola; Douze, Katja; Tribolo, Chantal; Martinez, Maria Lorenzo; ... Huysecom, Eric
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Molecular and Functional Analysis of Sunitinib-Resistance Induction in Human Renal Cell Carcinoma CellsRausch, Magdalena; Rutz, Adriano; Allard, Pierre-Marie; Delucinge, Céline; ... Nowak-Sliwinska, Patrycja
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Patients with elevated basal tryptase serum levels should be tested for hereditary alpha-tryptasemiaSpoerl, David; Docquier, Mylene; Coattrenec, Yann; Seebach, Jorg Dieter;
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Pearl millet and iron in the West African Sahel: Archaeobotanical investigation at Tongo Maaré Diabal, MaliChampion, Louis; Gestrich, N.; MacDonald, K.; Nieblas-Ramirez, L.; Fuller, D.Q.
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Simulated patterns of mitochondrial diversity are consistent with partial population turnover in Bronze Age Central EuropeBroccard, Nicolas; Monteiro Da Silva, Nuno Miguel; Currat, Mathias;
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Spatially explicit paleogenomic simulations support cohabitation with limited admixture between Bronze Age Central European populationsRio, Jérémy Marc Xavier; Quilodran, Claudio; Currat, Mathias;
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The Rediscovery of Jan Ruyscher and Its ConsequenceFiorillo, Flavia; Hendriks, Laura; Hajdas, Irka; Vandini, Mariangela; Huysecom, Eric
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The ULK1 kinase, a necessary component of the pro-regenerative and anti-aging machinery in HydraSuknovic, Nenad Slavko; Tomczyk, Szymon; Colevret, Delphine; Perruchoud, Chrystelle; Galliot, Brigitte
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Transition From Wild to Domesticated Pearl Millet (Pennisetum glaucum) Revealed in Ceramic Temper at Three Middle Holocene Sites in Northern MaliFuller, Dorian Q.; Barron, Aleese; Champion, Louis; Dupuy, Christian; ... Denham, Tim
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Ultrafast pulse shaping modulates perceived visual brightness in living animalsGaulier, Geoffrey; Dietschi, Quentin; Bhattacharyya, Swarnendu; Schmidt, Cédric; ... Wolf, Jean-Pierre
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Unmasking viral sequences by metagenomic next-generation sequencing in adult human blood samples during steroid-refractory/dependent graft-versus-host diseaseZanella, Marie-Céline; Cordey, Samuel; Laubscher, Florian; Docquier, Mylene; ... Vu Cantero, Diem-Lan
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[Book review of:] A German Barber-Surgeon in the Atlantic Slave Trade: The Seventeenth-Century Journal of Johann Peter OettingerAymeric Nsangou, Jacques De Limbepe;
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[Review of:] John J. Shea: Prehistoric Stone Tools of Eastern Africa: A GuideDouze, Katja;

Newspaper Articles

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[Compte-rendu de :] Shawn Michelle Smith, Photographic Returns. Racial Justice and the Time of Photography, 2020Sohier, Estelle;

Books

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Djibouti, des paysages et des hommesCauliez, Jessie; Gutherz, Xavier; Alarashi, Hala; Bruxelles, Laurent; ... Zazzo, Antoine

Book Chapters

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Évolutions techniques sur la longue durée dans la Falémé : résultats de la 23ème année du programme « Peuplement humain et paléoenvironnement en Afrique »Mayor, Anne; Douze, Katja; Bocoum, Hamady; Cervera, Céline; ... Huysecom, Eric
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Simulations of Human Dispersal and Genetic DiversityCurrat, Mathias; Quilodran, Claudio; Excoffier, Laurent;

Contributions à un dictionnaire / une encyclopédie

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MegalithsDelvoye, Adrien;

Reports

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Etude bioanthropologique de l'individu retrouvé dans la Baume de l'ancêtre (Vaud, Suisse)Desideri, Jocelyne;

Doctoral Thesis

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Étude de la diversité et de l'évolution des pharmacogènes dans les populations humaines par combinaison de données phénotypiques et génomiquesMouterde, Médéric;
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Evolution of Hoxd gene regulationHintermann, Aurélie;
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Probing the function of the claustrum using optogenetic and chemogenetic toolsMutel, Sophie;

2020

Scientific Articles

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Binding affinities of 438 hla proteins to complete proteomes of seven pandemic viruses and distributions of strongest and weakest hla peptide binders in populations worldwideBarquera, Rodrigo; Collen, Evelyn; Di, Da; Buhler, Stéphane; ... Sanchez-Mazas, Alicia
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Combining BrdU-Labeling to Detection of Neuronal Markers to Monitor Adult Neurogenesis in HydraBuzgariu, Wanda Christa; Curchod, Marie-Laure; Perruchoud, Chrystelle; Galliot, Brigitte;
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Compositional and provenance study of glass beads from archaeological sites in Mali and Senegal at the time of the first Sahelian statesTruffa Giachet, Miriam; Gratuze, Bernard; Mayor, Anne; Huysecom, Eric;
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Deficient autophagy in epithelial stem cells drives aging in the freshwater cnidarian HydraTomczyk, Szymon; Suknovic, Nenad Slavko; Schenkelaars, Quentin; Wenger, Yvan; ... Galliot, Brigitte
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Dynamic perceptual feature selectivity in primary somatosensory cortex upon reversal learningChereau, Ronan; Bawa, Tanika; Fodoulian, Leon; Carleton, Alan; ... Holtmaat, Anthony
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Emulsion Doping of Ionophores and Ion-Exchangers into Ion-Selective Electrode MembranesSoda, Yoshiki; Gao, Wenyue; Bosset, Jérôme; Bakker, Eric;
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Harmonizing hybridization dissonance in conservationQuilodran, Claudio; Montoya Burgos, Juan Ignacio; Currat, Mathias;
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High-throughput DNA barcoding of oligochaetes for abundance-based indices to assess the biological quality of sediments in streams and lakesVivien, Régis Lionel; Apotheloz-Perret-Gentil, Laure; Pawlowski, Jan Wojciech; Werner, Inge; ... Ferrari, Benoit J. D.
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Influence of Paleolithic range contraction, admixture and long‐distance dispersal on genetic gradients of modern humans in AsiaBranco, Catarina; Ray, Nicolas; Currat, Mathias; Arenas, Miguel;
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Neuroinflammation-Associated Aspecific Manipulation of Mouse Predator Fear by Toxoplasma gondiiKuby, Madlaina; Hammoudi, Pierre-Mehdi; Dogga, Sunil Kumar; Pages, Stéphane; ... Soldati-Favre, Dominique
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Neuroprotection Against Amyloid-b Induced DNA Double-Strand Breaks is Mediated by Multiple Retinoic Acid-Dependent PathwaysColas, Julien; Chessel, Natacha; Ouared, Ahmed Allaeddine; Gruz-Gibelli Da Mouta, Emmanuelle; ... Savioz, Armand
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New data on settlement and environment at the Pleistocene/Holocene boundary in Sudano-Sahelian West Africa: Interdisciplinary investigation at Fatandi V, Eastern SenegalChevrier, Benoît; Lespez, Laurent; Lebrun, Brice; Garnier, Aline; ... Huysecom, Eric
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Optimized low‐dose combinatorial drug treatment boosts selectivity and efficacy of colorectal carcinoma treatmentZoetemelk, Marloes; Ramzy, George Mourad; Rausch, Magdalena; Kossler, Thibaud; ... Nowak-Sliwinska, Patrycja
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Projecting introgression from domestic cats into European wildcats in the Swiss JuraQuilodrán, Claudio S.; Nussberger, Beatrice; Macdonald, David W.; Montoya Burgos, Juan Ignacio; Currat, Mathias
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Safety of the Geneva Cocktail, a Cytochrome P450 and P-Glycoprotein Phenotyping Cocktail, in Healthy Volunteers from Three Different Geographic OriginsRollason, Victoria; Mouterde, Médéric; Daali, Youssef; Čížková, Martina; ... Desmeules, Jules Alexandre
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Sars-cov-2 receptors and entry genes are expressed in the human olfactory neuroepithelium and brainFodoulian, Leon; Tuberosa, Joël; Rossier, Daniel; Boillat, Madlaina; ... Rodriguez, Ivan
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Similar patterns of genetic diversity and linkage disequilibrium in Western chimpanzees (Pan troglodytes verus) and humans indicate highly conserved mechanisms of MHC molecular evolutionVangenot, Christelle; Nunes, Jose Manuel; Doxiadis, Gaby M.; Poloni, Estella S.; ... Sanchez-Mazas, Alicia
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Synthèse morpho-sédimentaire et occurences archéologiques dans la vallée de la Falémé" (de 80 à 5 ka ; Sénégal oriental) : mise en évidence d'une permanence des occupations à la transition Pléistocène-HolocèneRasse, Michel; Lespez, Laurent; Lebrun, Brice; Tribolo, Chantal; ... Huysecom, Eric
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The foreign oligochaete species Quistadrilus multisetosus (Smith, 1900) in Lake Geneva: Morphological and molecular characterization and environmental influences on its distributionVivien, Régis Lionel; Lafont, Michel; Lods-Crozet, Brigitte; Holzmann, Maria; ... Ferrari, Benoit J. D.
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The Hsp70-Hsp90 co-chaperone Hop/Stip1 shifts the proteostatic balance from folding towards degradationBhattacharya, Kaushik; Weidenauer, Lorenz; Luengo, Tania Morán; Pieters, Ellis C.; ... Picard, Didier
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The polymorphism of Hydra microsatellite sequences provides strain-specific signaturesSchenkelaars, Quentin; Perez Cortes, Diego; Perruchoud, Chrystelle; Galliot, Brigitte;
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The Spatial Signature of Introgression After a Biological Invasion With HybridizationQuilodran, Claudio; Tsoupas, Alexandros; Currat, Mathias;
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Translucent in air and iridescent in water: structural analysis of a salamander egg sacZabuga, Aleksandra; Arrigo, Marcelle; Teyssier, Jérémie; Mouchet, Sébastien R.; ... Milinkovitch, Michel C.
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Unbiased metagenomic next-generation sequencing of blood from hospitalized febrile children in GabonFernandes, José Francisco; Laubscher, Florian; Held, Jana; Eckerle, Isabella Anne; ... Cordey, Samuel
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Variability of Early Iron Production in the Falémé Valley Region, Eastern SenegalWalmsley, Alexander Pardee; Serneels, Vincent; Hajdas, Irka; Mayor, Anne;
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Vernacular architecture in eastern Senegal: Chaînes opératoires and technical choicesPelmoine, Thomas; Mayor, Anne;

Newspaper Articles

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Rencontres : Begegnungen : Encounters avec Katja DouzeAymeric Nsangou, Jacques De Limbepe;
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The polymorphism of Hydra microsatellite sequences provides strain-specific signaturesSchenkelaars, Quentin; Perez Cortes, Diego; Perruchoud, Chrystelle; Galliot, Brigitte;

Book Chapters

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Archéologie dans la Falémé (Sénégal oriental) : résultats de la 22ème année du programme «Peuplement humain et paléoenvironnement en Afrique»Mayor, Anne; Douze, Katja; Bocoum, Hamadi; Cervera, Céline; ... Huysecom, Eric
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Technology and Function of Middle Stone Age Points. Insights from a Combined Approach at Bushman Rock Shelter, South AfricaDouze, Katja; Igreja, Marina; Rots, Veerle; Cnuts, Dries; Porraz, Guillaume
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The Horn of Africa at the end of the Pleistocene (75‑12 ka) in its macroregional contextLeplongeon, Alice; Ménard, Clément; Douze, Katja; Habte, Behailu; ... Pleurdeau, David

Contributions à un dictionnaire / une encyclopédie

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The First Emergence of Ceramic Production in AfricaHuysecom, Eric;

Doctoral Thesis

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Contribution à l'étude des facteurs évolutifs déterminant les profils moléculaires des gènes HLA des populations humainesGoeury, Thomas;
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Estimation of Population Admixture from Paleogenomic Data using Spatially Explicit SimulationsRio, Jérémy Marc Xavier;
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Etude ethnoarchéologique de l'architecture vernaculaire au Sénégal orientalPelmoine, Thomas;
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Functional Dissection of Neuronal Classes and Microcircuit Organization of the ClaustrumLeone, Roberta;
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Identification of genetic innovations in vertebratesTuberosa, Joël;
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Molecular bases of pathogen avoidance behaviors and parasitic host manipulationKuby, Madlaina;
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The peripheral olfactory system: from wiring to signal adaptationAssens, Alexis;

2019

Scientific Articles

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A Phoenician glass eye bead from 7th–5th c. cal BCE Nin-Bèrè 3, Mali: Compositional characterisation by LA–ICP–MSTruffa Giachet, Miriam; Gratuze, Bernard; Ozainne, Sylvain; Mayor, Anne; Huysecom, Eric
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An evolutionarily-conserved Wnt3/β-catenin/Sp5 feedback loop restricts head organizer activity in HydraVogg, Matthias Christian; Beccari, Léonardo; Iglesias Olle, Laura; Rampon, Christine; ... Galliot, Brigitte
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Comparative analysis of Middle Stone Age artifacts in Africa (CoMSAfrica)Will, Manuel; Tryon, Christian; Shaw, Matthew; Scerri, Eleanor M. L.; ... Brooks, Alison S.
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Comparative genomics groups phages of negativicutes and classical firmicutes despite different gram-staining propertiesRands, Christopher; Brüssow, Harald; Zdobnov, Evgeny;
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Conference Report on Session 85 "Tracking the Neolithization Processes on Both Sides of the Sinai: a Bridge Between the Near East and North-Eastern Africa"Bocquentin, Fanny; Kapustka, Katarina; Vieugue, Julien; Huysecom, Eric;
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Decoding Drosophila circadian pacemaker circuitKozlov, Anatoly; Nagoshi, Emi;
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Diet variability among pre‐Dogon and early Dogon populations (Mali) from stable isotopes and dental diseasesDlamini-Stoll, Nonhlanhla; Sealy, Judith; Mayor, Anne;
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Diversification, Intensification and Specialization: Changing Land Use in Western Africa from 1800 BC to AD 1500Kay, Andrea U.; Fuller, Dorian Q.; Neumann, Katharina; Eichhorn, Barbara; ... Kaplan, Jed O.
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Does NGS typing highlight our understanding of HLA population diversity?: Some good reasons to say yes and a few to say be carefulSanchez-Mazas, Alicia; Nunes, Jose Manuel;
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Hafting of Middle Paleolithic tools in Latium (central Italy): New data from Fossellone and Sant'Agostino cavesDegano, Ilaria; Soriano, Sylvain; Villa, Paola; Pollarolo, Luca; ... Tozzi, Carlo
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High-resolution HLA phased haplotype frequencies to predict the success of unrelated donor searches and clinical outcome following hematopoietic stem cell transplantationBuhler, Stéphane; Baldomero, Helen; Ferrari-Lacraz, Sylvie; Nunes, Jose Manuel; ... Villard, Jean
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Humans and Chimpanzees Display Opposite Patterns of Diversity in Arylamine N-Acetyltransferase GenesVangenot, Christelle; Gagneux, Pascal; de Groot, Natasja G.; Baumeyer, Adrian; ... Poloni, Estella S.
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Hybridization and introgression during density-dependent range expansion: European wildcats as a case studyQuilodran, Claudio; Nussberger, Beatrice; Montoya Burgos, Juan Ignacio; Currat, Mathias;
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Loss of neurogenesis in aging HydraTomczyk, Szymon; Buzgariu, Wanda Christa; Perruchoud, Chrystelle; Fisher, Kathleen; ... Galliot, Brigitte
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Model systems for regeneration: HydraVogg, Matthias Christian; Galliot, Brigitte; Tsiairis, Charisios D;
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Modern genomic tools reveal the structural and cellular diversity of cnidarian nervous systemsRentzsch, Fabian; Juliano, Celina; Galliot, Brigitte;
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Nouveaux ajouts à la liste des Lépidoptères du canton de GenèveAndriollo, Tommy; Landry, Bernard; Guibert, Bastien; Pastore, Maxime; Baumgart, Pierre
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Population history and genetic adaptation of the Fulani nomads: inferences from genome-wide data and the lactase persistence traitVicente, Mário; Priehodová, Edita; Diallo, Issa; Podgorná, Eliška; ... Schlebusch, Carina M.
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Problèmes d'archéologie développementale en AfriqueAymeric Nsangou, Jacques De Limbepe;
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