Département de génétique et évolution

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2021

Scientific Articles

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A West African Middle Stone Age site dated to the beginning of MIS 5: Archaeology, chronology, and paleoenvironment of the Ravin Blanc I (eastern Senegal)Douze, Katja; Lespez, Laurent; Rasse, Michel; Tribolo, Chantal; ... Huysecom, Eric
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Agricultural diversification in West Africa: an archaeobotanical study of the site of Sadia (Dogon Country, Mali)Champion, Louis; Fuller, Dorian Q.; Ozainne, Sylvain; Huysecom, Eric; Mayor, Anne
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The Rediscovery of Jan Ruyscher and Its ConsequenceFiorillo, Flavia; Hendriks, Laura; Hajdas, Irka; Vandini, Mariangela; Huysecom, Eric
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The ULK1 kinase, a necessary component of the pro-regenerative and anti-aging machinery in HydraSuknovic, Nenad Slavko; Tomczyk, Szymon; Colevret, Delphine; Perruchoud, Chrystelle; Galliot, Brigitte
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Transition From Wild to Domesticated Pearl Millet (Pennisetum glaucum) Revealed in Ceramic Temper at Three Middle Holocene Sites in Northern MaliFuller, Dorian Q.; Barron, Aleese; Champion, Louis; Dupuy, Christian; ... Denham, Tim
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Ultrafast pulse shaping modulates perceived visual brightness in living animalsGaulier, Geoffrey; Dietschi, Quentin; Bhattacharyya, Swarnendu; Schmidt, Cédric; ... Wolf, Jean-Pierre
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[Review of:] John J. Shea: Prehistoric Stone Tools of Eastern Africa: A GuideDouze, Katja;

Newspaper Articles

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[Compte-rendu de :] Shawn Michelle Smith, Photographic Returns. Racial Justice and the Time of Photography, 2020Sohier, Estelle;

Doctoral Thesis

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Probing the function of the claustrum using optogenetic and chemogenetic toolsMutel, Sophie;

2020

Scientific Articles

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Combining BrdU-Labeling to Detection of Neuronal Markers to Monitor Adult Neurogenesis in HydraBuzgariu, Wanda Christa; Curchod, Marie-Laure; Perruchoud, Chrystelle; Galliot, Brigitte;
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Compositional and provenance study of glass beads from archaeological sites in Mali and Senegal at the time of the first Sahelian statesTruffa Giachet, Miriam; Gratuze, Bernard; Mayor, Anne; Huysecom, Eric;
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Deficient autophagy in epithelial stem cells drives aging in the freshwater cnidarian HydraTomczyk, Szymon; Suknovic, Nenad Slavko; Schenkelaars, Quentin; Wenger, Yvan; ... Galliot, Brigitte
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Dynamic perceptual feature selectivity in primary somatosensory cortex upon reversal learningChereau, Ronan; Bawa, Tanika; Fodoulian, Leon; Carleton, Alan; ... Holtmaat, Anthony
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Emulsion Doping of Ionophores and Ion-Exchangers into Ion-Selective Electrode MembranesSoda, Yoshiki; Gao, Wenyue; Bosset, Jérôme; Bakker, Eric;
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Harmonizing hybridization dissonance in conservationQuilodran, Claudio; Montoya Burgos, Juan Ignacio; Currat, Mathias;
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High-throughput DNA barcoding of oligochaetes for abundance-based indices to assess the biological quality of sediments in streams and lakesVivien, Régis Lionel; Apotheloz-Perret-Gentil, Laure; Pawlowski, Jan Wojciech; Werner, Inge; ... Ferrari, Benoit J. D.
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Influence of Paleolithic range contraction, admixture and long‐distance dispersal on genetic gradients of modern humans in AsiaBranco, Catarina; Ray, Nicolas; Currat, Mathias; Arenas, Miguel;
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Neuroinflammation-Associated Aspecific Manipulation of Mouse Predator Fear by Toxoplasma gondiiKuby, Madlaina; Hammoudi, Pierre-Mehdi; Dogga, Sunil Kumar; Pages, Stéphane; ... Soldati-Favre, Dominique
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Neuroprotection Against Amyloid-b Induced DNA Double-Strand Breaks is Mediated by Multiple Retinoic Acid-Dependent PathwaysColas, Julien; Chessel, Natacha; Ouared, Ahmed Allaeddine; Gruz-Gibelli Da Mouta, Emmanuelle; ... Savioz, Armand
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New data on settlement and environment at the Pleistocene/Holocene boundary in Sudano-Sahelian West Africa: Interdisciplinary investigation at Fatandi V, Eastern SenegalChevrier, Benoît; Lespez, Laurent; Lebrun, Brice; Garnier, Aline; ... Huysecom, Eric
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Optimized low‐dose combinatorial drug treatment boosts selectivity and efficacy of colorectal carcinoma treatmentZoetemelk, Marloes; Ramzy, George Mourad; Rausch, Magdalena; Kossler, Thibaud; ... Nowak-Sliwinska, Patrycja
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Projecting introgression from domestic cats into European wildcats in the Swiss JuraQuilodrán, Claudio S.; Nussberger, Beatrice; Macdonald, David W.; Montoya Burgos, Juan Ignacio; Currat, Mathias
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Safety of the Geneva Cocktail, a Cytochrome P450 and P-Glycoprotein Phenotyping Cocktail, in Healthy Volunteers from Three Different Geographic OriginsRollason, Victoria; Mouterde, Médéric; Daali, Youssef; Čížková, Martina; ... Desmeules, Jules Alexandre
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Sars-cov-2 receptors and entry genes are expressed in the human olfactory neuroepithelium and brainFodoulian, Leon; Tuberosa, Joël; Rossier, Daniel; Boillat, Madlaina; ... Rodriguez, Ivan
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Similar patterns of genetic diversity and linkage disequilibrium in Western chimpanzees (Pan troglodytes verus) and humans indicate highly conserved mechanisms of MHC molecular evolutionVangenot, Christelle; Nunes, Jose Manuel; Doxiadis, Gaby M.; Poloni, Estella S.; ... Sanchez-Mazas, Alicia
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Synthèse morpho-sédimentaire et occurences archéologiques dans la vallée de la Falémé" (de 80 à 5 ka ; Sénégal oriental) : mise en évidence d’une permanence des occupations à la transition Pléistocène-HolocèneRasse, Michel; Lespez, Laurent; Lebrun, Brice; Tribolo, Chantal; ... Huysecom, Eric
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The foreign oligochaete species Quistadrilus multisetosus (Smith, 1900) in Lake Geneva: Morphological and molecular characterization and environmental influences on its distributionVivien, Régis Lionel; Lafont, Michel; Lods-Crozet, Brigitte; Holzmann, Maria; ... Ferrari, Benoit J. D.
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The Hsp70-Hsp90 co-chaperone Hop/Stip1 shifts the proteostatic balance from folding towards degradationBhattacharya, Kaushik; Weidenauer, Lorenz; Luengo, Tania Morán; Pieters, Ellis C.; ... Picard, Didier
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The polymorphism of Hydra microsatellite sequences provides strain-specific signaturesSchenkelaars, Quentin; Perez Cortes, Diego; Perruchoud, Chrystelle; Galliot, Brigitte;
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The Spatial Signature of Introgression After a Biological Invasion With HybridizationQuilodran, Claudio; Tsoupas, Alexandros; Currat, Mathias;
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Translucent in air and iridescent in water: structural analysis of a salamander egg sacZabuga, Aleksandra; Arrigo, Marcelle; Teyssier, Jérémie; Mouchet, Sébastien R.; ... Milinkovitch, Michel C.
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Unbiased metagenomic next-generation sequencing of blood from hospitalized febrile children in GabonFernandes, José Francisco; Laubscher, Florian; Held, Jana; Eckerle, Isabella Anne; ... Cordey, Samuel
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Variability of Early Iron Production in the Falémé Valley Region, Eastern SenegalWalmsley, Alexander Pardee; Serneels, Vincent; Hajdas, Irka; Mayor, Anne;
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Vernacular architecture in eastern Senegal: Chaînes opératoires and technical choicesPelmoine, Thomas; Mayor, Anne;

Newspaper Articles

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Rencontres : Begegnungen : Encounters avec Katja DouzeAymeric Nsangou, Jacques De Limbepe;
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The polymorphism of Hydra microsatellite sequences provides strain-specific signaturesSchenkelaars, Quentin; Perez Cortes, Diego; Perruchoud, Chrystelle; Galliot, Brigitte;

Book Chapters

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Archéologie dans la Falémé (Sénégal oriental) : résultats de la 22ème année du programme «Peuplement humain et paléoenvironnement en Afrique»Mayor, Anne; Douze, Katja; Bocoum, Hamadi; Cervera, Céline; ... Huysecom, Eric
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Technology and Function of Middle Stone Age Points. Insights from a Combined Approach at Bushman Rock Shelter, South AfricaDouze, Katja; Igreja, Marina; Rots, Veerle; Cnuts, Dries; Porraz, Guillaume
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The Horn of Africa at the end of the Pleistocene (75‑12 ka) in its macroregional contextLeplongeon, Alice; Ménard, Clément; Douze, Katja; Habte, Behailu; ... Pleurdeau, David

Contributions à un dictionnaire / une encyclopédie

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The First Emergence of Ceramic Production in AfricaHuysecom, Eric;

Doctoral Thesis

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Contribution à l’étude des facteurs évolutifs déterminant les profils moléculaires des gènes HLA des populations humainesGoeury, Thomas;
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Estimation of Population Admixture from Paleogenomic Data using Spatially Explicit SimulationsRio, Jérémy Marc Xavier;
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Etude ethnoarchéologique de l'architecture vernaculaire au Sénégal orientalPelmoine, Thomas;
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Functional Dissection of Neuronal Classes and Microcircuit Organization of the ClaustrumLeone, Roberta;
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Molecular bases of pathogen avoidance behaviors and parasitic host manipulationKuby, Madlaina;
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The peripheral olfactory system: from wiring to signal adaptationAssens, Alexis;

2019

Scientific Articles

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A Phoenician glass eye bead from 7th–5th c. cal BCE Nin-Bèrè 3, Mali: Compositional characterisation by LA–ICP–MSTruffa Giachet, Miriam; Gratuze, Bernard; Ozainne, Sylvain; Mayor, Anne; Huysecom, Eric
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An evolutionarily-conserved Wnt3/β-catenin/Sp5 feedback loop restricts head organizer activity in HydraVogg, Matthias Christian; Beccari, Léonardo; Iglesias Olle, Laura; Rampon, Christine; ... Galliot, Brigitte
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Comparative analysis of Middle Stone Age artifacts in Africa (CoMSAfrica)Will, Manuel; Tryon, Christian; Shaw, Matthew; Scerri, Eleanor M. L.; ... Brooks, Alison S.
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Comparative genomics groups phages of negativicutes and classical firmicutes despite different gram-staining propertiesRands, Christopher; Brüssow, Harald; Zdobnov, Evgeny;
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Conference Report on Session 85 "Tracking the Neolithization Processes on Both Sides of the Sinai: a Bridge Between the Near East and North-Eastern Africa"Bocquentin, Fanny; Kapustka, Katarina; Vieugue, Julien; Huysecom, Eric;
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Decoding Drosophila circadian pacemaker circuitKozlov, Anatoly; Nagoshi, Emi;
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Diet variability among pre‐Dogon and early Dogon populations (Mali) from stable isotopes and dental diseasesDlamini-Stoll, Nonhlanhla; Sealy, Judith; Mayor, Anne;
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Diversification, Intensification and Specialization: Changing Land Use in Western Africa from 1800 BC to AD 1500Kay, Andrea U.; Fuller, Dorian Q.; Neumann, Katharina; Eichhorn, Barbara; ... Kaplan, Jed O.
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Hafting of Middle Paleolithic tools in Latium (central Italy): New data from Fossellone and Sant'Agostino cavesDegano, Ilaria; Soriano, Sylvain; Villa, Paola; Pollarolo, Luca; ... Tozzi, Carlo
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High-resolution HLA phased haplotype frequencies to predict the success of unrelated donor searches and clinical outcome following hematopoietic stem cell transplantationBuhler, Stéphane; Baldomero, Helen; Ferrari-Lacraz, Sylvie; Nunes, Jose Manuel; ... Villard, Jean
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Humans and Chimpanzees Display Opposite Patterns of Diversity in Arylamine N-Acetyltransferase GenesVangenot, Christelle; Gagneux, Pascal; de Groot, Natasja G.; Baumeyer, Adrian; ... Poloni, Estella S.
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Hybridization and introgression during density-dependent range expansion: European wildcats as a case studyQuilodran, Claudio; Nussberger, Beatrice; Montoya Burgos, Juan Ignacio; Currat, Mathias;
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Loss of neurogenesis in aging HydraTomczyk, Szymon; Buzgariu, Wanda Christa; Perruchoud, Chrystelle; Fisher, Kathleen; ... Galliot, Brigitte
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Model systems for regeneration: HydraVogg, Matthias Christian; Galliot, Brigitte; Tsiairis, Charisios D;
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Modern genomic tools reveal the structural and cellular diversity of cnidarian nervous systemsRentzsch, Fabian; Juliano, Celina; Galliot, Brigitte;
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Nouveaux ajouts à la liste des Lépidoptères du canton de GenèveAndriollo, Tommy; Landry, Bernard; Guibert, Bastien; Pastore, Maxime; Baumgart, Pierre
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Population history and genetic adaptation of the Fulani nomads: inferences from genome-wide data and the lactase persistence traitVicente, Mário; Priehodová, Edita; Diallo, Issa; Podgorná, Eliška; ... Schlebusch, Carina M.
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Problèmes d'archéologie développementale en AfriqueAymeric Nsangou, Jacques De Limbepe;
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Radiocarbon dating and the protection of cultural heritageHajdas, Irka; Jull, A J Timothy; Huysecom, Eric; Mayor, Anne; ... Sava, Tiberiu
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SPLATCHE3: simulation of serial genetic data under spatially explicit evolutionary scenarios including long-distance dispersalCurrat, Mathias; Arenas, Miguel; Quilodran, Claudio; Excoffier, Laurent; Ray, Nicolas
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Testing different (e)DNA metabarcoding approaches to assess aquatic oligochaete diversity and the biological quality of sedimentsVivien, Régis Lionel; Apotheloz-Perret-Gentil, Laure; Pawlowski, Jan Wojciech; Werner, Inge; Ferrari, Benoit J.D.
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The menu varies with metabarcoding practices: a case study with the bat Plecotus auritusAndriollo, Tommy; Gillet, François; Michaux, Johan R.; Rüedi, Manuel;
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Vps11 and Vps18 of Vps-C membrane traffic complexes are E3 ubiquitin ligases and fine-tune signallingSegala, Grégory; Bennesch, Marcela; Mohammadi Ghahhari, Nastaran; Pandey, Deo Prakash; ... Picard, Didier

Professional Articles

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Recommandations d’un collectif franco-suisse d’experts pour une meilleure évaluation de la qualité écotoxicologique des sédiments par l’étude des communautés benthiquesApotheloz-Perret-Gentil, Laure; Lods-Crozet, Brigitte; Loizeau, Jean-Luc; Santiago, Sergio; Slaveykova, Vera

Newspaper Articles

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Nécrologie: Hartmann P. Koechlin (1919-2018)Huysecom, Eric;

Edited Books

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Afrique 300'000 ans de diversité humaine: catalogue de l'exposition, Muséum d'Histoire Naturelle et Université de GenèveSanchez-Mazas, Alicia; Mayor, Anne; Poloni, Estella S.; Douze, Katja; ... Hubert Van Blyenburgh, Ninian

Book Chapters

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Archéologie et environnements au Sénégal oriental : résultats de la 21ème année du programme international "Peuplement humain et paléoenvironnement en Afrique"Mayor, Anne; Douze, Katja; Aymeric Nsangou, Jacques De Limbepe; Bocoum, Hamady; ... Huysecom, Eric
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Freshwater Cnidarian Hydra: A Long-lived Model for Aging StudiesSchenkelaars, Quentin; Boukerch Akrour, Salima; Galliot, Brigitte;

Preprints

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Generic and context-dependent gene modulations during Hydra whole body regenerationWenger, Yvan; Buzgariu, Wanda Christa; Perruchoud, Chrystelle; Loichot, Gregory; Galliot, Brigitte

Doctoral Thesis

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Circadian Rhythms in Drosophila: From the Core Clock to Complex BehaviorsMachado Almeida, Pedro;
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Défendre sa communauté pendant l'ère atlantique : étude des fortifications endogènes dans la vallée de la Falémé (Sénégal oriental)Aymeric Nsangou, Jacques De Limbepe;
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Dissecting the rewarding and motivational nature of social interaction: a role of ventral tegmental area dopaminergic activityPrevost-Solie, Clément;
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ELAV mediates the repression of abd-A by transcriptional interference in the embryonic CNS of DrosophilaCastro Alvarez, Javier José;
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Étude archéométrique des perles en verre d’Afrique de l’Ouest: vers une meilleure compréhension des dynamiques techniques et commerciales à l’époque des empires précoloniauxTruffa Giachet, Miriam;
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Historical factors, environmental heterogeneity and genomic changes as drivers of fish diversification in the NeotropicsJardim De Queiroz, Luiz;
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Hydra, a model for studying the role of injury-induced ROS signalling during regeneration and monitoring the autophagy flux in live animalsSuknovic, Nenad Slavko;
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mathematical modelling and numerical simulations of growth-induced pattern formation in morphogenesisFofonjka, Anamarija;
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Mechano-chemical patterning of the skin: a mathematical and statistical perspectiveDe Oliveira Vilaca, Luis Miguel;
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Molecular ecology of three sympatric long-eared bat species (genus Plecotus)Andriollo, Tommy;
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Multi-layered regulation of Drosophila circadian behavior by molecular and neuronal factorsKozlov, Anatolii;
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SIRT1 in SF1 neurons links light inputs to circadian function in skeletal muscleAras, Ebru;
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Translational control of the iab-8 “lncRNA”: a CNS-Specific transcript from the Bithorax complex involved in fly sexual behaviorsFrei, Yohan;
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Uncovering the genetic basis of color pattern phenotypes and scale development in squamates through genomic and transcriptomic approachesUllate Agote, Asier;

2018

Scientific Articles

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A reply to Sahle and Braun's reply to ‘The pattern of emergence of a Middle Stone Age tradition at Gademotta and Kulkuletti (Ethiopia) through convergent tool and point technologies' [J. Hum. Evol. 91 (2016) 93–121]Douze, Katja; Delagnes, Anne; Rots, Veerle; Gravina, Brad;
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An abstract drawing from the 73,000-year-old levels at Blombos Cave, South AfricaHenshilwood, Christopher S.; d'Errico, Francesco; van Niekerk, Karen L.; Dayet, Laure; ... Pollarolo, Luca
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Back to the roots: Reducing evolutionary rate heterogeneity among sequences gives support for the early morphological hypothesis of the root of Siluriformes (Teleostei: Ostariophysi)Rivera Rivera, Carlos Javier; Montoya Burgos, Juan Ignacio;
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Bayesian estimation of partial population continuity using ancient DNA and spatially explicit simulationsMonteiro Da Silva, Nuno Miguel; Rio, Jérémy Marc Xavier; Kreutzer, Susanne; Papageorgopoulou, Christina; Currat, Mathias
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Between continuity and discontinuity: An overview of the West African Paleolithic over the last 200,000 yearsChevrier, Benoît; Huysecom, Eric; Soriano, S.; Rasse, M.; ... Tribolo, C.
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Consequences of diverse evolutionary processes on american genetic gradients of modern humansBranco, Catarina; Velasco, Miguel; Benguigui, Macarena; Currat, Mathias; ... Arenas, Miguel
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Cryptic Biological Invasions: a General Model of HybridizationQuilodran, Claudio; Austerlitz, Frédéric; Currat, Mathias; Montoya Burgos, Juan Ignacio;
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Deciphering the fine nucleotide diversity of full HLA class I and class II genes in a well-documented population from sub-Saharan AfricaGoeury, Thomas; Creary, L E; Brunet, Lydie; Galan, M; ... Sanchez-Mazas, Alicia
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Effect of hybridization with genome exclusion on extinction riskQuilodran, Claudio; Currat, Mathias; Montoya Burgos, Juan Ignacio;
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Ethno-archaeometry in eastern Senegal: The connections between raw materials and finished ceramic productsCantin, N.; Mayor, Anne;
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From Neandertals to modern humans: New data on the UluzzianVilla, Paola; Pollarolo, Luca; Conforti, Jacopo; Marra, Fabrizio; ... Panzeri, Laura
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