Département de biologie structurale et bioinformatique

Show items per page
Elements: 641
Page 1 on 7

2016

Scientific Articles

add to browser selection
Anti-ApoA-1 IgG serum levels predict worse post-stroke outcomesCarbone, Federico; Satta, Nathalie; Montecucco, Fabrizio; Virzi, Julien; ... Vuilleumier, Nicolas
add to browser selection
Anti-apolipoprotein A-1 auto-antibodies as active modulators of atherothrombosisPagano, Sabrina; Carbone, Federico; Burger, Fabienne; Roth, Aline; ... Vuilleumier, Nicolas
add to browser selection
Association between anti-apolipoprotein A-1 antibodies and cardiovascular disease in the general population. Results from the CoLaus studyAntiochos, Panagiotis; Marques-Vidal, Pedro; Virzi, Julien; Pagano, Sabrina; ... Vuilleumier, Nicolas
add to browser selection
Blood DNA Yield but Not Integrity or Methylation Is Impacted After Long-Term StorageBulla, Alexandre; De Witt, Brian; Ammerlaan, Wim; Betsou, Fay; Lescuyer, Pierre
add to browser selection
Cerebral ischemic events in patients with pancreatic cancer: A retrospective cohort study of 17 patients and a literature reviewBonnerot, Mathieu; Humbertjean, Lisa; Mione, Gioia; Lacour, Jean-Christophe; ... Richard, Sébastien
add to browser selection
Clinical Mass spectrometry proteomics (cMSP) for medical laboratory: What does the future hold?Lehmann, Sylvain; Brede, Cato; Lescuyer, Pierre; Cocho, José A.; ... Hirtz, Christophe
add to browser selection
Comparison of Cardiac and Non-Cardiac Biomarkers for Risk Stratification in Elderly Patients with Non-Massive Pulmonary EmbolismVuilleumier, Nicolas; Simona, Aurélien; Méan, Marie; Limacher, Andreas; ... Righini, Marc Philip
add to browser selection
Detection of busulfan adducts on proteinsAcosta Martin, Adelina Elena; Antinori Malaspina, Paola; Uppugunduri Satyanarayana, Chakradhara Rao; Daali, Youssef; ... Lescuyer, Pierre
add to browser selection
Diagnostic performance of peroxiredoxin 1 to determine time-of-onset of acute cerebral infarctionRichard, Sébastien; Lapierre, Vanessa; Girerd, Nicolas; Bonnerot, Mathieu; ... Sanchez, Jean-Charles
add to browser selection
Efficacy of intravitreal aflibercept in macular telangiectasia type 1 is linked to the ocular angiogenic profileKowalczuk, Laura; Matet, Alexandre; Dirani, Ali; Daruich, Alejandra; ... Behar-Cohen, Francine
add to browser selection
Evaluation and identification of dioxin exposure biomarkers in human urine by high-resolution metabolomics, multivariate analysis and in vitro synthesisJeanneret, Fabienne; Tonoli, David; Hochstrasser, Denis; Saurat, Jean-Hilaire; ... Rudaz, Serge
add to browser selection
Evaluation of steroidomics by liquid chromatography hyphenated to mass spectrometry as a powerful analytical strategy for measuring human steroid perturbationsJeanneret, Fabienne; Tonoli, David; Rossier, Michel; Saugy, Martial; ... Rudaz, Serge
add to browser selection
Highlights of the Biology and Disease-driven Human Proteome Project, 2015-2016Van Eyk, Jennifer E; Corrales, Fernando Jose; Aebersold, Ruedi; Cerciello, Ferdinando; ... Omenn, Gilbert S
add to browser selection
Human Proteome Project Mass Spectrometry Data Interpretation Guidelines 2.1Deutsch, Eric W; Overall, Christopher M; Van Eyk, Jennifer E; Baker, Mark S; ... Omenn, Gilbert S
add to browser selection
ICEPO: the ion channel electrophysiology ontologyHinard, Valérie; Britan, Aurore; Rougier, Jean-Sébastien; Bairoch, Amos Marc; ... Gaudet, Pascale
add to browser selection
LacaScore: a novel plasma sample quality control tool based on ascorbic acid and lactic acid levelsTrezzi, Jean-Pierre; Bulla, Alexandre; Bellora, Camille; Rose, Michael; ... Betsou, Fay
add to browser selection
Looking for missing proteins in the proteome of human spermatozoa: an updateVandenbrouck, Yves; Lane, Lydie; Carapito, Christine; Duek, Paula Debora; ... Pineau, Charles
add to browser selection
Metrics for the Human Proteome Project 2016: Progress on Identifying and Characterizing the Human Proteome, Including Post-Translational ModificationsOmenn, Gilbert S; Lane, Lydie; Lundberg, Emma K; Beavis, Ronald C; ... Deutsch, Eric W
add to browser selection
New molecular insights into modulation of platelet reactivity in aspirin-treated patients using a network-based approachZufferey Bakos, Anne; Ibberson, Mark; Reny, Jean-Luc; Nolli, Severine; ... Fontana, Pierre
add to browser selection
neXtA5: accelerating annotation of articles via automated approaches in neXtProtMottin, Luc; Gobeill, Julien; Pasche, Emilie; Michel, Pierre-André Albert; ... Ruch, Patrick
add to browser selection
PepPSy: a web server to prioritize gene products in experimental and biocuration workflowsSallou, Olivier; Duek, Paula Debora; Darde, Thomas A; Collin, Olivier; ... Chalmel, Frédéric
add to browser selection
Prognostic value of PCSK9 levels in patients with acute coronary syndromesGencer, Baris; Montecucco, Fabrizio; Nanchen, David; Carbone, Federico; ... Mach, François
add to browser selection
The missing protein landscape of human chromosomes 2 and 14: progress and current statusDuek, Paula; Bairoch, Amos Marc; Gateau, Alain; Vandenbrouck, Yves; Lane, Lydie
add to browser selection
Vitamin D receptor is expressed within human carotid plaques and correlates with pro-inflammatory M1 macrophagesCarbone, Federico; Satta, Nathalie; Burger, Fabienne; Roth, Aline; ... Montecucco, Fabrizio

Doctoral Thesis

add to browser selection
Blood proteome characterization of the interplay between glycation and aspirin-mediated acetylation in vitro and in diabetic patientsFinamore, Francesco;

2015

Scientific Articles

add to browser selection
A Population-Based Model to Consider the Effect of Seasonal Variation on Serum 25(OH)D and Vitamin D StatusVuistiner, Philippe; Rousson, Valentin; Henry, Hugues; Lescuyer, Pierre; ... Guessous, Idris
add to browser selection
A systems proteomics view of the endogenous human claudin protein familyLiu, Fei; Koval, Michael; Ranganathan, Shoba; Fanayan, Susan; ... Baker, Mark S
add to browser selection
Anti-apoA-1 auto-antibodies increase mouse atherosclerotic plaque vulnerability, myocardial necrosis and mortality triggering TLR2 and TLR4Montecucco, Fabrizio; Braunersreuther, V; Burger, Fabienne; Lenglet, S; ... Vuilleumier, Nicolas
add to browser selection
Aryl Hydrocarbon Receptor Activation in Acne Vulgaris Skin: A Case Series from the Region of Naples, ItalyFabbrocini, Gabriella; Kaya, Gurkan; Caseiro Silverio, Patricia; De Vita, Valerio; ... Saurat, Jean-Hilaire
add to browser selection
Aspirin-mediated acetylation of haemoglobin increases in presence of high glucose concentration and decreases protein glycationFinamore, Francesco; Priego-Capote, Feliciano; Nolli, Severine; Fontana, Pierre; Sanchez, Jean-Charles
add to browser selection
Association between Agent Orange Exposure and Nonmelanotic Invasive Skin Cancer: A Pilot StudySorg, Olivier;
add to browser selection
Auto-antibodies as possible markers and mediators of ischemic, dilated, and rhythmic cardiopathiesSatta, Nathalie; Vuilleumier, Nicolas;
add to browser selection
Biomarkers for cardiovascular risk assessment in autoimmune diseasesTeixeira, Priscila Camillo; Ferber, Philippe; Vuilleumier, Nicolas; Cutler, Paul;
add to browser selection
C11orf83, a Mitochondrial Cardiolipin-Binding Protein Involved in bc1 Complex Assembly and Supercomplex StabilizationDesmurs-Rousseau, Marjorie; Foti, Michelangelo; Raemy, Etienne; Vaz, Frédéric Maxime; ... Lane, Lydie
add to browser selection
Cardiac biomarkers and clinical scores for risk stratification in elderly patients with non-high-risk pulmonary embolismVuilleumier, Nicolas; Limacher, Andreas; Méan, M; Choffat, J; ... Righini, Marc Philip
add to browser selection
CD14 as a Mediator of the Mineralocorticoid Receptor-Dependent Anti-apolipoprotein A-1 IgG Chronotropic Effect on CardiomyocytesMannic, Tiphaine; Satta, Nathalie; Pagano, Sabrina; Python, Magaly; ... Vuilleumier, Nicolas
add to browser selection
Cerebrospinal fluid angiotensin-converting enzyme for diagnosis of neurosarcoidosisBridel, Claire; Courvoisier, Delphine; Vuilleumier, Nicolas; Lalive, Patrice H;
add to browser selection
Characterisation of the influences of aspirin-acetylation and glycation on human plasma proteinsFinamore, Francesco; Priego-Capote, Feliciano; Nolli, Severine; Zufferey Bakos, Anne; ... Sanchez, Jean-Charles
add to browser selection
Comparative analysis of cerebrospinal fluid from the meningo-encephalitic stage of T. b. gambiense and rhodesiense sleeping sickness patients using TMT quantitative proteomicsTiberti, Natalia; Sanchez, Jean-Charles;
add to browser selection
Computational and Mass-Spectrometry-Based Workflow for the Discovery and Validation of Missing Human Proteins: Application to Chromosomes 2 and 14Carapito, Christine; Lane, Lydie; Benama, Mohamed; Opsomer, Alisson; ... Vandenbrouck, Yves
add to browser selection
Converting neXtProt into Linked Data and nanopublicationsChichester, Christine; Karch, Olivier; Gaudet, Pascale; Lane, Lydie; ... Bairoch, Amos Marc
add to browser selection
Creating a specialist protein resource network: a meeting report for the protein bioinformatics and community resources retreatBabbitt, Patricia C; Bagos, Pantelis G; Bairoch, Amos Marc; Bateman, Alex; ... Vriend, Gerrit
add to browser selection
Data from proteomic characterization of the role of Snail1 in murine mesenchymal stem cells and 3T3-L1 fibroblasts differentiationPeláez-García, A; Barderas, R; Mendes, M; Lopez-Lucendo, M; ... Casal, J I
add to browser selection
De-regulated expression of the BRG1 chromatin remodeling factor in bone marrow mesenchymal stromal cells induces senescence associated with the silencing of NANOG and changes in the levels of chromatin proteinsSquillaro, Tiziana; Severino, Valeria; Alessio, Nicola; Farina, Annarita; ... Galderisi, Umberto
add to browser selection
Deep Question Answering for protein annotationGobeill, Julien; Gaudinat, Arnaud; Pasche, Emilie; Vishnyakova, Dina; ... Ruch, Patrick
add to browser selection
Devising a Consensus Framework for Validation of Novel Human Coding LociBruford, Elspeth A; Lane, Lydie; Harrow, Jennifer;
add to browser selection
Diabetogenic milieus induce specific changes in mitochondrial transcriptome and differentiation of human pancreatic isletsBrun, Thierry; Li, Ning; Jourdain, Alexis; Gaudet, Pascale; ... Maechler, Pierre
add to browser selection
Diagnostic and prognostic value of autoantibodies anti-apolipoprotein A-1 and anti-phosphorylcholine in acute non-ST elevation myocardial infarctionRubini Gimenez, Maria; Pagano, Sabrina; Virzi, Julien; Montecucco, Fabrizio; ... Mueller, Christian
add to browser selection
E-selectin and vascular cell adhesion molecule-1 as biomarkers of 3-month outcome in cerebrovascular diseasesRichard, Sébastien; Lagerstedt, Linnéa; Burkhard, Pierre; Debouverie, Marc; ... Sanchez, Jean-Charles
add to browser selection
Ethical Criteria for Human Trials of Stem-Cell-Derived Dopaminergic Neurons in Parkinson's DiseaseHurst, Samia; Mauron, Alex; Momjian, Shahan Marc; Burkhard, Pierre;
add to browser selection
Evaluation of electrode position in deep brain stimulation by image fusion (MRI and CT)Barnaure, I; Pollak, Pierre; Momjian, Shahan Marc; Horvath, Judit; ... Vargas Gomez, Maria Isabel
add to browser selection
Gastric bypass in morbid obese patients is associated with reduction in adipose tissue inflammation via N-oleoylethanolamide (OEA)-mediated pathwaysMontecucco, Fabrizio; Lenglet, Sébastien; Quercioli, Alessandra; Burger, Fabienne; ... Pataky, Zoltan
add to browser selection
Gene Ontology Consortium: going forwardGaudet, Pascale;
add to browser selection
Genetic deletion of the adaptor protein p66Shc increases susceptibility to short-term ischaemic myocardial injury via intracellular salvage pathwaysAkhmedov, Alexander; Montecucco, Fabrizio; Braunersreuther, Vincent; Camici, Giovanni G; ... Lüscher, Thomas F
add to browser selection
Human Spermatozoa as a Model for Detecting Missing Proteins in the Context of the Chromosome-Centric Human Proteome ProjectJumeau, Fanny; Com, Emmanuelle; Lane, Lydie; Duek, Paula Debora; ... Pineau, Charles
add to browser selection
Human sweat metabolomics for lung cancer screeningCalderón-Santiago, Mónica; Priego-Capote, Feliciano; Turck, Natacha; Robin, Xavier; ... Luque de Castro, María D
add to browser selection
Identification of hemoglobin variants by top-down mass spectrometry using selected diagnostic product ionsCoelho Graca, Didia; Hartmer, Ralf; Jabs, Wolfgang; Beris, Photis; ... Lescuyer, Pierre
add to browser selection
Impact of systemic inflammation and autoimmune diseases on apoA-I and HDL plasma levels and functionsMontecucco, Fabrizio; Favari, Elda; Norata, Giuseppe Danilo; Ronda, Nicoletta; ... Vuilleumier, Nicolas
add to browser selection
Improving reconstituted HDL composition for efficient post-ischemic reduction of ischemia reperfusion injuryBrulhart-meynet, Marie-claude; Braunersreuther, Vincent; Brinck, Jonas; Montecucco, Fabrizio; ... Frias, Miguel
add to browser selection
Key challenges for the creation and maintenance of specialist protein resourcesHolliday, Gemma L; Bairoch, Amos Marc; Bagos, Pantelis G; Chatonnet, Arnaud; ... Bateman, Alex
add to browser selection
L-Tryptophan as a Novel Potential Pharmacological Treatment for Wound Healing via Aryl Hydrocarbon Receptor ActivationBarouti, Neda; Mainetti, Carlo; Fontao, Lionel; Sorg, Olivier;
add to browser selection
Mass spectrometry-based quantification of malignant biliary stenosis biomarkers in human bileFarina, Annarita; Adrait, Annie; Dumonceau, Jean-Marc; Delhaye, Myriam; ... Coute, Yohann
add to browser selection
Measuring Serum Amyloid A for Infection Prediction in Aneurysmal Subarachnoid HemorrhageAzurmendi Gil, Leire; Degos, Vincent; Tiberti, Natalia; Kapandji, Natacha; ... Sanchez, Jean-Charles
add to browser selection
Mechanisms of local invasion in enteroendocrine tumors: Identification of novel candidate cytoskeleton-associated proteins in an experimental mouse model by a proteomic approach and validation in human tumorsCouderc, Christophe; Bollard, Julien; Coute, Yohann; Massoma, Patrick; ... Roche, Colette
add to browser selection
Metrics for the Human Proteome Project 2015: Progress on the Human Proteome and Guidelines for High-Confidence Protein IdentificationOmenn, Gilbert S; Lane, Lydie; Lundberg, Emma K; Beavis, Ronald C; ... Deutsch, Eric W
add to browser selection
N-terminome analysis of the human mitochondrial proteomeVaca Jacome, Alvaro Sebastian; Rabilloud, Thierry; Schaeffer-Reiss, Christine; Rompais, Magali; ... Carapito, Christine
add to browser selection
Neopterin plasma concentrations in patients with aneurysmal subarachnoid hemorrhage: correlation with infection and long-term outcomeAzurmendi Gil, Leire; Degos, Vincent; Tiberti, Natalia; Kapandji, Natacha; ... Sanchez, Jean-Charles
add to browser selection
Neuropathology of Parkinsonism in Alzheimer's diseaseKovari, Eniko Veronika; Bouras, Constantin; Herrmann, François; Burkhard, Pierre; ... Xekardaki, Aikaterini
add to browser selection
Pathophysiology and Treatments of Oxidative Injury in Ischemic Stroke: Focus on the Phagocytic NADPH Oxidase 2Carbone, Federico; Teixeira, Priscila Camillo; Braunersreuther, Vincent; Mach, François; ... Montecucco, Fabrizio
add to browser selection
Potent Anti-HIV Chemokine Analogs Direct Post-Endocytic Sorting of CCR5Boensch, Claudia; Munteanu, Nicoleta Mihaela; Rossitto-Borlat, Irène; Fuerstenberg, Alexandre; Hartley, Oliver
add to browser selection
Proteomic and lipidomic analyses of paraoxonase defined high density lipoprotein particles: association of paraoxonase with the anti-coagulant, protein S.Moren, Xenia; Lhomme, Marie; Bulla, Alexandre; Sanchez, Jean-Charles; ... James, Richard W
add to browser selection
Quantification Of HER2 By Targeted Mass Spectrometry in Formalin-Fixed Paraffin-Embedded Breast Cancer TissuesSteiner, Carine; Tille, Jean-Christophe; Lamerz, Jens; Kux van Geijtenbeek, Sabine; ... Ducret, Axel
add to browser selection
Quest for Missing Proteins: Update 2015 on Chromosome-Centric Human Proteome ProjectHorvatovich, Péter; Lundberg, Emma K; Chen, Yu-Ju; Sung, Ting-Yi; ... Hancock, William S
add to browser selection
Serum osteopontin levels are upregulated and predict disability after an ischaemic strokeCarbone, Federico; Vuilleumier, Nicolas; Burger, Fabienne; Roversi, Gloria; ... Montecucco, Fabrizio
add to browser selection
SRM-Based quantification of malignant biliary stenosis biomarkers in human bileFarina, Annarita; Adrait, Annie; Dumonceau, Jean-Marc; Delhaye, Myriam; ... Coute, Yohann
add to browser selection
Stairs instead of elevators at the workplace decreases PCSK9 levels in a healthy populationKamani, Christel Hermann; Gencer, Baris; Montecucco, Fabrizio; Courvoisier, Delphine; ... Mach, François
add to browser selection
Target discovery from protein databases: challenges for curationChichester, Christine; Gaudet, Pascale;
add to browser selection
The Confidence Information Ontology: a step towards a standard for asserting confidence in annotationsBastian, Frederic B; Chibucos, Marcus C; Gaudet, Pascale; Giglio, Michelle; ... Robinson-Rechavi, Marc
add to browser selection
The Human Autoantibody Response to Apolipoprotein A-I Is Focused on the C-Terminal Helix: A New Rationale for Diagnosis and Treatment of Cardiovascular Disease?Pagano, Sabrina; Gaertner, Hubert François; Cerini, Fabrice; Mannic, Tiphaine; ... Hartley, Oliver
add to browser selection
The Human Diabetes Proteome Project (HDPP): The 2014 updateSchvartz, Domitille; Bergsten, Peter; Baek, Kwang Hyun; Barba de la Rosa, Ana Paulina; ... Sanchez, Jean-Charles
add to browser selection
The neXtProt knowledgebase on human proteins: current statusGaudet, Pascale; Michel, Pierre-André Albert; Zahn, Monique; Cusin, Isabelle; ... Bairoch, Amos Marc
add to browser selection
Treatment with KLEPTOSE® CRYSMEB reduces mouse atherogenesis by impacting on lipid profile and Th1 lymphocyte responseMontecucco, Fabrizio; Lenglet, Sébastien; Carbone, Federico; Boero, Silvia; ... Mach, François
add to browser selection
Treatment with recombinant tissue plasminogen activator (r-TPA) induces neutrophil degranulation in vitro via defined pathwaysCarbone, Federico; Vuilleumier, Nicolas; Bertolotto, Maria; Burger, Fabienne; ... Montecucco, Fabrizio
add to browser selection
Treatment with sulphated galactan inhibits macrophage chemotaxis and reduces intraplaque macrophage content in atherosclerotic miceGomes Quindere, Ana Luiza; Barros Benevides, Norma Maria; Pelli, Graziano; Lenglet, Sébastien; ... Montecucco, Fabrizio

Doctoral Thesis

add to browser selection
Data-independent mass spectrometry for the analysis of peptide mixturePak, Hui Song;

2014

Scientific Articles

add to browser selection
18FDG-PET-CT: an imaging biomarker of high-risk carotid plaques. Correlation to symptoms and microembolic signalsMüller, Hubertus Fritz Georg; Viaccoz, Aurélien; Fisch, Loraine; Bonvin, Christophe; ... Sztajzel, Roman
add to browser selection
2014 recommendations for the treatment of Parkinson's diseaseWaldvogel, Daniel; Burkhard, Pierre;
add to browser selection
A systems wide mass spectrometric based linear motif screen to identify dominant in-vivo interacting proteins for the ubiquitin ligase MDM2Nicholson, Judith; Scherl, Alexander; Way, Luke; A. Blackburn, Elizabeth; ... R. Hupp, Ted
add to browser selection
Activation of Nrf2 in keratinocytes causes chloracne (MADISH)-like skin disease in miceSchäfer, Matthias; Willrodt, Ann-Helen; Kurinna, Svitlana; Link, Andrea S; ... Werner, Sabine
add to browser selection
Acute and subacute drug-induced movement disordersBurkhard, Pierre;
add to browser selection
AhR signalling and dioxin toxicitySorg, Olivier;
add to browser selection
An integrated approach for comparative proteomic analysis of human bile reveals overexpressed cancer-associated proteins in malignant biliary stenosisLukic, Natalija; Visentin, Rémy; Delhaye, Myriam; Frossard, Jean-Louis; ... Farina, Annarita
add to browser selection
Applications of mass spectrometry for quantitative protein analysis in formalin-fixed paraffin-embedded tissuesSteiner, Carine; Ducret, Axel; Tille, Jean-Christophe; Thomas, Marlene; ... Cutler, Paul
add to browser selection
Assessment of the influence of the patient's inflammatory state on the accuracy of a haptoglobin selected reaction monitoring assayLassout, Olivier; Hochstrasser, Denis; Lescuyer, Pierre;
add to browser selection
Autoantibodies to apolipoprotein A-1 as a biomarker of cardiovascular autoimmunityVuilleumier, Nicolas; Montecucco, Fabrizio; Hartley, Oliver;
add to browser selection
Bile carcinoembryonic cell adhesion molecule 6 (CEAM6) as a biomarker of malignant biliary stenosesFarina, Annarita; Dumonceau, Jean-Marc; Antinori Malaspina, Paola; Annessi-Ramseyer, Isabelle; ... Lescuyer, Pierre
add to browser selection
Bile proteome in health and diseaseFarina, Annarita; Delhaye, Myriam; Dumonceau, Jean-Marc; Pierre, Lescuyer;
<< previous | 1 | 2 | 3 | 4 | 5 | 6 | 7 |