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OrthoDB v10: sampling the diversity of animal, plant, fungal, protist, bacterial and viral genomes for evolutionary and functional annotations of orthologs Kriventseva, Evgenia; Kouznetsov, Dimitri; Tegenfeldt, Fredrik; Manni, Mose; ... Zdobnov, Evgeny 2019
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Genomic signatures accompanying the dietary shift to phytophagy in polyphagan beetles Seppey, Mathieu; Ioannidis, Panagiotis; Emerson, Brent C; Pitteloud, Camille; ... Alvarez, Nadir 2019
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Molecular evolutionary trends and feeding ecology diversification in the Hemiptera, anchored by the milkweed bug genome Panfilio, Kristen A; Vargas Jentzsch, Iris M; Benoit, Joshua B; Erezyilmaz, Deniz; ... Richards, Stephen 2019
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Detection of dicistroviruses RNA in blood of febrile Tanzanian children Cordey, Samuel; Laubscher, Florian; Hartley, Mary-Anne; Junier, Thomas; ... Kaiser, Laurent 2019
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BUSCO: assessing genome assembly and annotation completeness Seppey, Mathieu; Manni, Mose; Zdobnov, Evgeny 2019
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Using BUSCO to Assess Insect Genomic Resources Waterhouse, Robert M; Seppey, Mathieu; Simao Neto, Felipe; Zdobnov, Evgeny 2019
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Comparative genomics groups phages of negativicutes and classical firmicutes despite different gram-staining properties Rands, Christopher; Brüssow, Harald; Zdobnov, Evgeny 2019
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In silico Analysis Suggests Common Appearance of scaRNAs in Type II Systems and Their Association With Bacterial Virulence Guzina, Jelena; Chen, Wei-Hua; Stankovic, Tamara; Djordjevic, Magdalena; ... Djordjevic, Marko 2018
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Detection of novel astroviruses MLB1 and MLB2 in the sera of febrile Tanzanian children Cordey, Samuel; Hartley, Mary-Anne; Keitel, Kristina; Laubscher, Florian; ... D'Acremont, Valérie 2018
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De novo genomics of non-model arthropods Simao Neto, Felipe 2018
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Human pegivirus persistence in the human blood virome after allogeneic haematopoietic stem cell transplantation Vu Cantero, Diem-Lan; Cordey, Samuel; Simonetta, Federico; Brito, Francisco; ... Kaiser, Laurent 2018
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ACI-1 beta-lactamase is widespread across human gut microbiomes in Negativicutes due to transposons harboured by tailed prophages Rands, Christopher; Starikova, Elizaveta V; Brüssow, Harald; Kriventseva, Evgenia; ... Zdobnov, Evgeny 2018
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Metagenomics analysis of the virome of 300 concentrates from a Swiss platelet bank Brito, Francisco; Cordey, Samuel; Delwart, Eric; Deng, Xutao; ... Preynat-Seauve, Olivier 2018
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OrthoDB v9.1: cataloging evolutionary and functional annotations for animal, fungal, plant, archaeal, bacterial and viral orthologs Zdobnov, Evgeny; Tegenfeldt, Fredrik; Kuznetsov, D; Waterhouse, Robert; ... Kriventseva, Evgenia 2017
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Genomic Features of the Damselfly Calopteryx splendens Representing a Sister Clade to Most Insect Orders Ioannidis, Panagiotis; Simao Neto, Felipe; Waterhouse, Robert; Manni, Mose; ... Zdobnov, Evgeny 2017
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Understanding key features of bacterial restriction-modification systems through quantitative modeling Rodic, Andjela; Blagojevic, Bojana; Zdobnov, Evgeny; Djordjevic, Magdalena; Djordjevic, Marko 2017
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Rapid evolution of female-biased genes among four species of Anopheles malaria mosquitoes Papa, Francesco; Windbichler, Nikolai; Waterhouse, Robert; Cagnetti, Alessia; ... Papathanos, Philippos Aris 2017
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Scoring Targets of Transcription in Bacteria Rather than Focusing on Individual Binding Sites Djordjevic, Marko; Djordjevic, Magdalena; Zdobnov, Evgeny 2017
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[Bioinformatics analysis of antimicrobial resistance genes and prophages colocalized in human gut metagenomes] Starikova, E V; Prianichnikov, N A; Zdobnov, Evgeny; Govorun, V M 2017
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Metagenomics analysis of red blood cell and fresh-frozen plasma units Lau, Pierre; Cordey, Samuel; Brito, Francisco; Tirefort, Diderik; ... Preynat-Seauve, Olivier 2017
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