| | Title | Authors / Editors | Date |
|
unige:159654 |
Comprehensive mouse microbiota genome catalog reveals major difference to its human counterpart |
Kieser, Silas; Zdobnov, Evgeny; Trajkovski, Mirko |
2022 |
|
unige:139248 |
LEMMI: a continuous benchmarking platform for metagenomics classifiers |
Seppey, Mathieu; Manni, Mose; Zdobnov, Evgeny |
2020 |
|
unige:139369 |
The genome of the blind soil-dwelling and ancestrally wingless dipluran campodea augens: a key reference hexapod for studying the emergence of insect innovations |
Manni, Mose; Simao Neto, Felipe; Robertson, Hugh M; Gabaglio, Marco Aurelio; ... Zdobnov, Evgeny |
2020 |
|
unige:139347 |
ATLAS: a snakemake workflow for assembly, annotation, and genomic binning of metagenome sequence data |
Kieser, Silas; Brown, Joseph; Zdobnov, Evgeny; Trajkovski, Mirko; McCue, Lee Ann |
2020 |
|
unige:139349 |
Phigaro: high-throughput prophage sequence annotation |
Starikova, Elizaveta V; Tikhonova, Polina O; Prianichnikov, Nikita A; Rands, Christopher; ... Govorun, Vadim M |
2020 |
|
unige:115501 |
Using BUSCO to Assess Insect Genomic Resources |
Waterhouse, Robert M; Seppey, Mathieu; Simao Neto, Felipe; Zdobnov, Evgeny |
2019 |
|
unige:115368 |
OrthoDB v10: sampling the diversity of animal, plant, fungal, protist, bacterial and viral genomes for evolutionary and functional annotations of orthologs |
Kriventseva, Evgenia; Kouznetsov, Dimitri; Tegenfeldt, Fredrik; Manni, Mose; ... Zdobnov, Evgeny |
2019 |
|
unige:123149 |
Viral sequences detection by high-throughput sequencing in cerebrospinal fluid of individuals with and without central nervous system disease |
Schibler, Manuel; Brito, Francisco; Zanella, Marie-Céline; Zdobnov, Evgeny; ... Kaiser, Laurent |
2019 |
|
unige:123152 |
Comparative genomics groups phages of negativicutes and classical firmicutes despite different gram-staining properties |
Rands, Christopher; Brüssow, Harald; Zdobnov, Evgeny |
2019 |
|
unige:123160 |
Molecular evolutionary trends and feeding ecology diversification in the Hemiptera, anchored by the milkweed bug genome |
Panfilio, Kristen A; Vargas Jentzsch, Iris M; Benoit, Joshua B; Erezyilmaz, Deniz; ... Richards, Stephen |
2019 |
|
unige:123167 |
BUSCO: assessing genome assembly and annotation completeness |
Seppey, Mathieu; Manni, Mose; Zdobnov, Evgeny |
2019 |
|
unige:139372 |
Identification of Viral Signatures Using High-Throughput Sequencing on Blood of Patients With Kawasaki Disease |
L'Huillier, Arnaud; Brito, Francisco; Wagner, Noémie; Cordey, Samuel; ... Kaiser, Laurent |
2019 |
|
unige:115849 |
In silico Analysis Suggests Common Appearance of scaRNAs in Type II Systems and Their Association With Bacterial Virulence |
Guzina, Jelena; Chen, Wei-Hua; Stankovic, Tamara; Djordjevic, Magdalena; ... Djordjevic, Marko |
2018 |
|
unige:109659 |
Metagenomics analysis of the virome of 300 concentrates from a Swiss platelet bank |
Brito, Francisco; Cordey, Samuel; Delwart, Eric; Deng, Xutao; ... Preynat-Seauve, Olivier |
2018 |
|
unige:126289 |
ACI-1 beta-lactamase is widespread across human gut microbiomes in Negativicutes due to transposons harboured by tailed prophages |
Rands, Christopher; Starikova, Elizaveta V; Brüssow, Harald; Kriventseva, Evgenia; ... Zdobnov, Evgeny |
2018 |
|
unige:111768 |
Human pegivirus persistence in the human blood virome after allogeneic haematopoietic stem cell transplantation |
Vu Cantero, Diem-Lan; Cordey, Samuel; Simonetta, Federico; Brito, Francisco; ... Kaiser, Laurent |
2018 |
|
unige:112636 |
Scoring Targets of Transcription in Bacteria Rather than Focusing on Individual Binding Sites |
Djordjevic, Marko; Djordjevic, Magdalena; Zdobnov, Evgeny |
2017 |
|
unige:112638 |
[Bioinformatics analysis of antimicrobial resistance genes and prophages colocalized in human gut metagenomes] |
Starikova, E V; Prianichnikov, N A; Zdobnov, Evgeny; Govorun, V M |
2017 |
|
unige:94543 |
Metagenomics analysis of red blood cell and fresh-frozen plasma units |
Lau, Pierre; Cordey, Samuel; Brito, Francisco; Tirefort, Diderik; ... Preynat-Seauve, Olivier |
2017 |
|
unige:111030 |
BUSCO applications from quality assessments to gene prediction and phylogenomics |
Waterhouse, Robert; Seppey, Mathieu; Simao Neto, Felipe; Manni, Mose; ... Zdobnov, Evgeny |
2017 |
Zdobnov, Evgeny
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