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Dissecting HIV Virulence: Heritability of Setpoint Viral Load, CD4+ T-Cell Decline, and Per-Parasite Pathogenicity Bertels, Frederic; Marzel, Alex; Leventhal, Gabriel; Mitov, Venelin; ... Regoes, Roland R 2018
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Performance of genotypic algorithms for predicting tropism for HIV-1 CRF01_AE recombinant Soulie, C; Morand-Joubert, L; Cottalorda, J; Charpentier, C; ... Marcelin, A G 2018
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Quantifying the fitness cost of HIV-1 drug resistance mutations through phylodynamics Kühnert, Denise; Kouyos, Roger; Shirreff, George; Pečerska, Jūlija; ... Bonhoeffer, Sebastian 2018
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Time to overcome pretreatment HIV drug resistance Yerly Ferrillo, Sabine; Calmy, Alexandra 2018
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Quantifying the drivers of HIV transmission and prevention in men who have sex with men: a population model-based analysis in Switzerland Kusejko, K; Marzel, A; Hampel, B; Bachmann, N; ... Kouyos, R D 2018
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Antiretroviral-treated HIV-1 patients can harbour resistant viruses in CSF despite an undetectable viral load in plasma Soulie, Cathia; Grudé, Maxime; Descamps, Diane; Amiel, Corinne; ... Marcelin, Anne-Geneviève 2017
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Prevalence of HIV-1 drug resistance in treated patients with viral load >50 copies/mL: a 2014 French nationwide study Assoumou, L; Charpentier, C; Recordon-Pinson, P; Grudé, M; ... Reigadas, S 2017
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Role of Gag mutations in PI resistance in the Swiss HIV cohort study: bystanders or contributors? Kletenkov, K; Hoffmann, D; Böni, J; Yerly Ferrillo, Sabine; ... Klimkait, T 2017
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Mining for pairs: shared clinic visit dates identify steady HIV-positive partnerships Marzel, A; Shilaih, M; Turk, T; Campbell, N K; ... Kouyos, R D 2017
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Determinants of HIV-1 broadly neutralizing antibody induction Rusert, Peter; Kouyos, Roger D; Kadelka, Claus; Ebner, Hanna; ... Trkola, Alexandra 2016
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A Direct Comparison of Two Densely Sampled HIV Epidemics: The UK and Switzerland Ragonnet-Cronin, Manon L; Shilaih, Mohaned; Günthard, Huldrych F; Hodcroft, Emma B; ... Brown, Andrew J Leigh 2016
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Large-scale inference of conjunctive Bayesian networks Montazeri, Hesam; Kuipers, Jack; Kouyos, Roger; Böni, Jürg; ... Beerenwinkel, Niko 2016
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Tracing HIV-1 transmission: envelope traits of HIV-1 transmitter and recipient pairs Oberle, Corinna S; Joos, Beda; Rusert, Peter; Campbell, Nottania K; ... Günthard, Huldrych F 2016
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Genotypic Resistance Tests Sequences Reveal the Role of Marginalized Populations in HIV-1 Transmission in Switzerland Shilaih, Mohaned; Marzel, Alex; Yang, Wan Lin; Scherrer, Alexandra U; ... Kouyos, Roger 2016
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The global spread of HIV-1 subtype B epidemic Magiorkinis, Gkikas; Angelis, Konstantinos; Mamais, Ioannis; Katzourakis, Aris; ... Vandamme, Anne-Mieke 2016
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In Vivo Profiling and Distribution of Known and Novel Phase I and Phase II Metabolites of Efavirenz in Plasma, Urine, and Cerebrospinal Fluid Aouri, Manel; Barcelo, Catalina; Ternon, Béatrice; Cavassini, Matthias; ... Decosterd, Laurent A 2016
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Emergence of Acquired HIV-1 Drug Resistance Almost Stopped in Switzerland: A 15-Year Prospective Cohort Analysis Scherrer, Alexandra U; von Wyl, Viktor; Yang, Wan-Lin; Kouyos, Roger D; ... Günthard, Huldrych F 2016
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Successful Prevention of Transmission of Integrase Resistance in the Swiss HIV Cohort Study Scherrer, Alexandra U; Yang, Wan-Lin; Kouyos, Roger D; Böni, Jürg; ... Günthard, Huldrych F 2016
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HIV-Positive-to-HIV-Positive Liver Transplantation Calmy, Alexandra; Van Delden, Christian; Giostra, Emiliano; Junet, C; ... Berney, Thierry 2016
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Viral Escape in the Central Nervous System with Multidrug-Resistant Human Immunodeficiency Virus-1 Béguelin, C; Vázquez, M; Bertschi, M; Yerly Ferrillo, Sabine; ... Cusini, A 2016
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