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 TitleAuthors / EditorsDate
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Dissecting HIV Virulence: Heritability of Setpoint Viral Load, CD4+ T-Cell Decline, and Per-Parasite Pathogenicity Bertels, Frederic; Marzel, Alex; Leventhal, Gabriel; Mitov, Venelin; ... Regoes, Roland R 2018
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Quantifying the fitness cost of HIV-1 drug resistance mutations through phylodynamics Kühnert, Denise; Kouyos, Roger; Shirreff, George; Pečerska, Jūlija; ... Bonhoeffer, Sebastian 2018
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Role of Gag mutations in PI resistance in the Swiss HIV cohort study: bystanders or contributors? Kletenkov, K; Hoffmann, D; Böni, J; Yerly Ferrillo, Sabine; ... Klimkait, T 2017
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Late hepatitis B reactivation following direct-acting antiviral-based treatment of recurrent hepatitis C in an anti-HBc-positive liver transplant recipient Vionnet, Julien; Pascual, Manuel; Testoni, Barbara; Combet, Christophe; ... Moradpour, Darius 2017
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Mining for pairs: shared clinic visit dates identify steady HIV-positive partnerships Marzel, A; Shilaih, M; Turk, T; Campbell, N K; ... Kouyos, R D 2017
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A Systematic Review and Meta-Analysis of HCV Clearance Gauthiez, Emeline; Habfast-Robertson, Ines; Rüeger, Sina; Kutalik, Zoltan; ... Bochud, Pierre-Yves 2017
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Emergence of Acquired HIV-1 Drug Resistance Almost Stopped in Switzerland: A 15-Year Prospective Cohort Analysis Scherrer, Alexandra U; von Wyl, Viktor; Yang, Wan-Lin; Kouyos, Roger D; ... Günthard, Huldrych F 2016
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Determinants of HIV-1 broadly neutralizing antibody induction Rusert, Peter; Kouyos, Roger D; Kadelka, Claus; Ebner, Hanna; ... Trkola, Alexandra 2016
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A Direct Comparison of Two Densely Sampled HIV Epidemics: The UK and Switzerland Ragonnet-Cronin, Manon L; Shilaih, Mohaned; Günthard, Huldrych F; Hodcroft, Emma B; ... Brown, Andrew J Leigh 2016
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Large-scale inference of conjunctive Bayesian networks Montazeri, Hesam; Kuipers, Jack; Kouyos, Roger; Böni, Jürg; ... Beerenwinkel, Niko 2016
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Tracing HIV-1 transmission: envelope traits of HIV-1 transmitter and recipient pairs Oberle, Corinna S; Joos, Beda; Rusert, Peter; Campbell, Nottania K; ... Günthard, Huldrych F 2016
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Genotypic Resistance Tests Sequences Reveal the Role of Marginalized Populations in HIV-1 Transmission in Switzerland Shilaih, Mohaned; Marzel, Alex; Yang, Wan Lin; Scherrer, Alexandra U; ... Kouyos, Roger 2016
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Successful Prevention of Transmission of Integrase Resistance in the Swiss HIV Cohort Study Scherrer, Alexandra U; Yang, Wan-Lin; Kouyos, Roger D; Böni, Jürg; ... Günthard, Huldrych F 2016
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Decreasing Proportion of Recent Infections among Newly Diagnosed HIV-1 Cases in Switzerland, 2008 to 2013 Based on Line-Immunoassay-Based Algorithms Schüpbach, Jörg; Niederhauser, Christoph; Yerly Ferrillo, Sabine; Regenass, Stephan; ... Gebhardt, Martin D 2015
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Persistence of Transmitted HIV-1 Drug Resistance Mutations Associated with Fitness Costs and Viral Genetic Backgrounds Yang, Wan-Lin; Kouyos, Roger D.; Böni, Jürg; Yerly Ferrillo, Sabine; ... Günthard, Huldrych F. 2015
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Assessing the Paradox Between Transmitted and Acquired HIV Type 1 Drug Resistance Mutations in the Swiss HIV Cohort Study From 1998 to 2012 Yang, Wan-Lin; Kouyos, Roger; Scherrer, Alexandra U; Böni, Jürg; ... Günthard, Huldrych F 2015
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Corrigendum: reduced IFNλ4 activity is associated with improved HCV clearance and reduced expression of interferon-stimulated genes Terczyńska-Dyla, Ewa; Bibert, Stéphanie; Duong, Francois H T; Krol, Ilona; ... Bochud, Pierre-Yves 2015
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Assessing efficacy of different nucleos(t)ide backbones in NNRTI-containing regimens in the Swiss HIV Cohort Study Yang, Wan-Lin; Kouyos, Roger D; Scherrer, Alexandra U; Böni, Jürg; ... Günthard, Huldrych F 2015
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Treatment-Naive Individuals Are the Major Source of Transmitted HIV-1 Drug Resistance in Men Who Have Sex With Men in the Swiss HIV Cohort Study Drescher, Sara M; von Wyl, Viktor; Yang, Wan-Lin; Böni, Jürg; ... Calmy, Alexandra 2014
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Social Meets Molecular: Combining Phylogenetic and Latent Class Analyses to Understand HIV-1 Transmission in Switzerland Avila, D.; Keiser, Olivia; Egger, M.; Kouyos, R.; ... Spycher, B. D. 2014
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