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 TitleAuthors / EditorsDate
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Dissecting HIV Virulence: Heritability of Setpoint Viral Load, CD4+ T-Cell Decline, and Per-Parasite Pathogenicity Bertels, Frederic; Marzel, Alex; Leventhal, Gabriel; Mitov, Venelin; ... Regoes, Roland R 2018
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Quantifying the fitness cost of HIV-1 drug resistance mutations through phylodynamics Kühnert, Denise; Kouyos, Roger; Shirreff, George; Pečerska, Jūlija; ... Bonhoeffer, Sebastian 2018
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Hepatitis C virus dynamics among intravenous drug users suggest that an annual treatment uptake above 10% would eliminate the disease by 2030 Bruggmann, Philip; Blach, Sarah; Deltenre, Pierre; Fehr, Jan; ... Negro, Francesco 2017
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A Direct Comparison of Two Densely Sampled HIV Epidemics: The UK and Switzerland Ragonnet-Cronin, Manon L; Shilaih, Mohaned; Günthard, Huldrych F; Hodcroft, Emma B; ... Brown, Andrew J Leigh 2016
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Large-scale inference of conjunctive Bayesian networks Montazeri, Hesam; Kuipers, Jack; Kouyos, Roger; Böni, Jürg; ... Beerenwinkel, Niko 2016
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Tracing HIV-1 transmission: envelope traits of HIV-1 transmitter and recipient pairs Oberle, Corinna S; Joos, Beda; Rusert, Peter; Campbell, Nottania K; ... Günthard, Huldrych F 2016
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Genotypic Resistance Tests Sequences Reveal the Role of Marginalized Populations in HIV-1 Transmission in Switzerland Shilaih, Mohaned; Marzel, Alex; Yang, Wan Lin; Scherrer, Alexandra U; ... Kouyos, Roger 2016
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Assessing the Paradox Between Transmitted and Acquired HIV Type 1 Drug Resistance Mutations in the Swiss HIV Cohort Study From 1998 to 2012 Yang, Wan-Lin; Kouyos, Roger; Scherrer, Alexandra U; Böni, Jürg; ... Günthard, Huldrych F 2015
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Estimating the basic reproductive number from viral sequence data Stadler, Tanja; Kouyos, Roger; von Wyl, Viktor; Yerly Ferrillo, Sabine; ... Bonhoeffer, Sebastian 2012
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Inferring epidemic contact structure from phylogenetic trees Leventhal, Gabriel E; Kouyos, Roger; Stadler, Tanja; Wyl, Viktor von; ... Bonhoeffer, Sebastian 2012