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 TitleAuthors / EditorsDate
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An Integrative Multi-Omics Workflow to Address Multifactorial Toxicology Experiments Gonzalez Ruiz, Victor; Schvartz, Domitille; Sandstrom Von Tobel, Jenny; Pezzatti, Julian; ... Rudaz, Serge 2019
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Blood biomarkers in acute brain injury disorders Lagerstedt, Linnéa 2018
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Combined lipidomic and proteomic analysis of isolated human islets exposed to palmitate reveals time-dependent changes in insulin secretion and lipid metabolism Roomp, Kirsten; Kristinsson, Hjalti; Schvartz, Domitille; Ubhayasekera, Kumari; ... Bergsten, Peter 2017
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Clinical Mass spectrometry proteomics (cMSP) for medical laboratory: What does the future hold? Lehmann, Sylvain; Brede, Cato; Lescuyer, Pierre; Cocho, José A.; ... Hirtz, Christophe 2017
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Back to the Future - Part 2. Post-mortem assessment and evolutionary role of the bio-medicolegal sciences Ferrara, Santo Davide; Cecchetto, Giovanni; Cecchi, Rossana; Favretto, Donata; ... Bajanowski, Thomas 2017
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Reverse phase protein arrays enable glioblastoma molecular subtyping Hutter, Gregor; Sailer, Martin; Azad, Tej Deepak; Von Bueren, André; ... Mariani, Luigi 2017
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The SIB Swiss Institute of Bioinformatics' resources: focus on curated databases Zdobnov, Evgeny 2016
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Mass spectrometry-based selectivity and sensitivity enhancement for the quantification of protein expression changes in anti-viral response mechanisms Alghanem, Bandar 2016
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Accurate mass spectral libraries and predicted liquid chromatography retention times in bioanalysis and data independent metabolomics Bruderer, Tobias 2016
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Chemoproteomics-Enabled Discovery of a Potent and Selective Inhibitor of the DNA Repair Protein MGMT Wang, Chao; Abegg, Daniel; Hoch, Dominic Gregor; Adibekian, Alexander 2016
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Comparative Genomics Analysis of Streptococcus tigurinus Strains Identifies Genetic Elements Specifically and Uniquely Present in Highly Virulent Strains Diene, Seydina Mouhamadou; Francois, Patrice; Zbinden, Andrea; Entenza, José Manuel; Resch, Grégory 2016
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Quantitative variability of 342 plasma proteins in a human twin population Liu, Yansheng; Buil Demur, Alfonso Alberto; Collins, Ben C; Gillet, Ludovic C J; ... Aebersold, Ruedi 2015
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Stable incorporation of α-smooth muscle actin into stress fibers is dependent on specific tropomyosin isoforms Prunotto, Marco; Bruschi, Maurizio; Gunning, Peter; Gabbiani, Giulio; ... Chaponnier, Christine 2015
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State transition7-dependent phosphorylation is modulated by changing environmental conditions, and its absence triggers remodeling of photosynthetic protein complexes Bergner, Sonja Verena; Scholz, Martin; Trompelt, Kerstin; Barth, Johannes; ... Hippler, Michael 2015
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Target of Rapamycin Complex 2 Regulates Actin Polarization and Endocytosis via Multiple Pathways Rispal, Delphine; Eltschinger, Sandra; Stahl, Michael; Vaga, Stefania; ... Loewith, Robbie Joséph 2015
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Development of novel high resolution mass spectrometry proteomic workflows to support the investigation of protein expression of dendritic cells during anti-viral response Zhang, Ying 2015
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Development of computational tools to improve data-independent workflows for the characterization of proteins and metabolites by mass spectrometry Bilbao Pena, Aivett 2015
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Proteome-Wide Profiling of Targets of Cysteine-reactive Small Molecules by using Ethynyl Benziodoxolone Reagents Abegg, Daniel; Frei, Reto; Cerato, Luca; Prasad Hari, Durga; ... Adibekian, Alexander 2015
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A chromosome-centric human proteome project (C-HPP) to characterize the sets of proteins encoded in chromosome 17 Liu, Suli; Im, Hogune; Bairoch, Amos Marc; Cristofanilli, Massimo; ... Hancock, William S 2013
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Calmodulin expression distinguishes the smooth muscle cell population of human carotid plaque Coen, Matteo; Marchetti, Giovanna; Palagi, Patricia M; Zerbinati, Carlotta; ... Bochaton-Piallat, Marie-Luce 2013
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Identification, structural and pharmacological characterization of τ-CnVA, a conopeptide that selectively interacts with somatostatin sst3 receptor Petrel, C; Hocking, H G; Reynaud, M; Upert, G; ... Servent, D 2013
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WASH is required for lysosomal recycling and efficient autophagic and phagocytic digestion King, Jason S; Gueho, Aurélie; Hagedorn, Monica; Gopaldass, Navin Andréw; ... Insall, Robert H 2013
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IndiMax: fast and reliable filtering methodology for Tandem Mass Spectrometry data Kuzyakiv, Rostyslav 2013
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Proteomic analysis of the substantia nigra in patients with Parkinson's disease Licker, Virginie 2013
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Analytical proteomics by liquid chromatography tandem mass spectrometry in obesity and diabetes research Sajic, Tatjana 2013
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Cerebrospinal fluid biomarkers for stage determination and treatment outcome evaluation in patients affected by Human African trypanosomiasis Tiberti, Natalia 2013
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The Chromosome-Centric Human Proteome Project for cataloging proteins encoded in the genome Paik, Young-Ki; Jeong, Seul-Ki; Omenn, Gilbert S; Uhlen, Mathias; ... Hancock, William S 2012
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Translational proteomics Lescuyer, Pierre; Bianchi, Laura; Hochstrasser, Denis; Bini, Luca; Sanchez, Jean-Charles 2012
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Characterization of acetic acid bacteria and study of the molecular strategies involved in the resistance to acetic acid during oxidative fermentation Andres Barrao, Cristina 2012
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Novel analytical strategies for the quantitative analysis of proteins by mass spectrometry Lesur, Antoine 2012
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Dysfunction of rat INS-1E pancreatic ß-cells induced by chronic high glucose stimuli Schvartz, Domitille 2012
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A network-based approach to elucidate determinants of platelet reactivity in aspirin-treated cardiovascular patients Zufferey Bakos, Anne 2012
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Comparative analysis of secreted proteins from normal and preeclamptic trophoblastic cells using proteomic approaches Epiney, Manuella; Ribaux, Pascale Garlonne; Arboit, Patrizia; Irion, Olivier; Cohen, Marie-Benoîte 2012
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ViralZone: a knowledge resource to understand virus diversity Hulo, Chantal; De Castro, Eduardo; Masson, Patrick Marc David; Bougueleret, Lydie; ... Le Mercier, Philippe 2011
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Proteomic analysis reveals that apolipoprotein A1 levels are decreased in patients with Budd-Chiari syndrome Talens, Simone; Hoekstra, Jildou; Dirkx, Steffen P G; Darwish Murad, Sarwa; ... Eapen, CE 2011
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Temporal proteomic profiling of embryonic stem cell secretome during cardiac and neural differentiation Farina, Annarita; D'Aniello, Cristina; Severino, Valeria; Hochstrasser, Denis; ... Chambery, Angela 2011
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Platelet reactivity is a stable and global phenomenon in aspirin-treated cardiovascular patients Zufferey Bakos, Anne; Reny, Jean-Luc; Combescure, Christophe; De Moerloose, Philippe; ... Fontana, Pierre 2011
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Early activation of the fatty acid metabolism pathway by chronic high glucose exposure in rat insulin secretory beta-cells Coute, Yohann; Brunner, Yannick; Schvartz, Domitille; Hernandez, Celine; ... Sanchez, Jean-Charles 2010
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Covalent capture and chemical tagging for the isolation of N-terminal cysteine and cysteine-containing tryptic peptides and their quantitative analysis by mass spectrometry Giron, Priscille 2010
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Ubiquitination and cysteine nitrosylation during aging and Alzheimer's disease Riederer, Irene M.; Schiffrin, Mariano; Kovari, Eniko Veronika; Bouras, Constantin; Riederer, Beat M. 2009
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HAMAP: a database of completely sequenced microbial proteome sets and manually curated microbial protein families in UniProtKB/Swiss-Prot De Oliveira Lima, Tania; Auchincloss Damay, Andréa; Coudert, Elisabeth; Keller, Guillaume Bertrand; ... Bairoch, Amos Marc 2009
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Proteomic analysis of human bile and potential applications for cancer diagnosis Farina, Annarita; Dumonceau, Jean-Marc; Lescuyer, Pierre 2009
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The cell-envelope proteome of Bifidobacterium longum in an in vitro bile environment Ruiz, Lorena; Coute, Yohann; Sanchez, Borja; de los Reyes-Gavilan, C. G.; ... Margolles, A. 2009
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Proteomic analysis of mononuclear cells of patients with minimal-change nephrotic syndrome of childhood Gonzalez, Elsa; Neuhaus, Thomas; Kemper, Markus J.; Girardin, Eric 2009
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A search for small noncoding RNAs in Staphylococcus aureus reveals a conserved sequence motif for regulation Geissmann, Thomas; Chevalier, Clement; Cros, Marie-Josee; Boisset, Sandrine; ... Romby, Pascale 2009
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OrthoDB: the hierarchical catalog of eukaryotic orthologs Kriventseva, Evgenia; Rahman, Nazim; Espinosa, Octavio; Zdobnov, Evgeny 2008
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The World-2DPAGE Constellation to promote and publish gel-based proteomics data through the ExPASy server Hoogland, Christine; Mostaguir, Khaled; Appel, Ron David; Lisacek, Frédérique 2008
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Engineering high-throughput proteomics pipelines Vaezzadeh, Ali Reza 2008
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Understanding signal sequences with machine learning Falcone, Jean-Luc 2008
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Proteomic profiling in an animal model of acute pancreatitis Fetaud, Vanessa; Frossard, Jean-Louis; Farina, Annarita; Pastor, Catherine; ... Lescuyer, Pierre 2008
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