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Junier, Thomas
 
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 TitleAuthors / EditorsDate
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 New complete genome sequences of human rhinoviruses shed light on their phylogeny and genomic features Tapparel, Caroline; Junier, Thomas; Gerlach, Daniel; Cordey, Samuel; ... Kaiser, Laurent 2007
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 Drug resistance in newly HIV diagnosed individuals: transmission rate, clusters and persistence Yerly Ferrillo, Sabine; Junier, Thomas; Boffi, E.; Gunthard, H. F.; ... Kaiser, Laurent 2008
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 The cis-acting replication elements define human enterovirus and rhinovirus species Cordey, Samuel; Gerlach, Daniel; Junier, Thomas; Zdobnov, Evgeny; ... Tapparel, Caroline 2008
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 TRiFLe, a program for in silico terminal restriction fragment length polymorphism analysis with user-defined sequence sets Junier, Pilar; Junier, Thomas; Witzel, Karl-Paul 2008
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 Biased distributions and decay of long interspersed nuclear elements in the chicken genome Abrusan, Gyorgy; Krambeck, Hans-Jurgen; Junier, Thomas; Giordano, Joti; Warburton, Peter E. 2008
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 Genome-wide search reveals a novel GacA-regulated small RNA in Pseudomonas species Gonzalez, Nicolas; Heeb, Stephan; Valverde, Claudio; Kay, Elisabeth; ... Haas, Dieter 2008
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 Impact of newly HIV diagnosed individuals on the transmission of drug resistance Yerly Ferrillo, Sabine; Junier, Thomas; Gayet-Ageron, Angèle; El Amari, E. Boffi; ... Kaiser, Laurent 2009
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 New respiratory enterovirus and recombinant rhinoviruses among circulating picornaviruses Tapparel, Caroline; Junier, Thomas; Gerlach, Daniel; Van-Belle, Sandra; ... Kaiser, Laurent 2009
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 The impact of transmission clusters on primary drug resistance in newly diagnosed HIV-1 infection Yerly Ferrillo, Sabine; Junier, Thomas; Gayet-Ageron, Angèle; Boffi El Amari, Emmanuelle Jane; ... Kaiser, Laurent 2009
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 Community analysis of betaproteobacterial ammonia-oxidizing bacteria using the amoCAB operon Junier, Pilar; Kim, Ok-Sun; Junier, Thomas; Ahn, Tae-Seok; ... Witzel, Karl-Paul 2009
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 The genome of the Gram-positive metal- and sulfate-reducing bacterium Desulfotomaculum reducens strain MI-1 Junier, Pilar; Junier, Thomas; Podell, Sheila; Sims, David R.; ... Bernier-Latmani, Rizlan 2010
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 The Newick utilities: high-throughput phylogenetic tree processing in the UNIX shell Junier, Thomas; Zdobnov, Evgeny 2010
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 Rhinovirus genome evolution during experimental human infection Cordey, Samuel; Junier, Thomas; Gerlach, Daniel; Gobbini, Francesca; ... Kaiser, Laurent 2010
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 Rhinovirus genome variation during chronic upper and lower respiratory tract infections Tapparel, Caroline; Cordey, Samuel; Junier, Thomas; Farinelli, Laurent Luca Denis; ... Kaiser, Laurent 2011
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 High-throughput phylogenomics : from vertebrate conserved non-coding sequences to viral genomics Junier, Thomas 2011
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 Impact of highly active antiretroviral therapy on the molecular epidemiology of newly diagnosed HIV infections Ambrosioni Czyrko, Juan; Junier, Thomas; Delhumeau, Cécile; Calmy, Alexandra; ... Yerly Ferrillo, Sabine 2012
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 Purifying selection in mammalian mitochondrial protein-coding genes is highly effective and congruent with evolution of nuclear genes Popadin, Konstantin; Nikolaev, Sergey Igorievich; Junier, Thomas; Baranova, Maria; Antonarakis, Stylianos 2013
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 Bacterial communities in trace metal contaminated lake sediments are dominated by endospore-forming bacteria Sauvain, Loïc; Bueche, Matthieu; Junier, Thomas; Masson, Matthieu; ... Junier, Pilar 2014
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 Endospore-forming bacteria as new proxies to assess impact of eutrophication in Lake Geneva (Switzerland–France) Wunderlin, Tina; Corella, Juan Pablo; Junier, Thomas; Bueche, Matthieu; ... Junier, Pilar 2014
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 CEGA - a catalog of conserved elements from genomic alignments Dousse, Aline; Junier, Thomas; Zdobnov, Evgeny 2016
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