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 TitleAuthors / EditorsDate
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Quantifying the fitness cost of HIV-1 drug resistance mutations through phylodynamics Kühnert, Denise; Kouyos, Roger; Shirreff, George; Pečerska, Jūlija; ... Bonhoeffer, Sebastian 2018
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Persistence of Transmitted HIV-1 Drug Resistance Mutations Associated with Fitness Costs and Viral Genetic Backgrounds Yang, Wan-Lin; Kouyos, Roger D.; Böni, Jürg; Yerly Ferrillo, Sabine; ... Günthard, Huldrych F. 2015
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Molecular epidemiology reveals long-term changes in HIV type 1 subtype B transmission in Switzerland Kouyos, R. D.; von Wyl, Viktor; Yerly Ferrillo, Sabine; Boni, Jurg; ... Gunthard, Huldrych 2010
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Long-term trends of HIV type 1 drug resistance prevalence among antiretroviral treatment-experienced patients in Switzerland von Wyl, Viktor; Yerly Ferrillo, Sabine; Burgisser, Philippe; Klimkait, Thomas; ... Swiss, H. I. V. Cohort Stud 2009
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Inferring epidemic contact structure from phylogenetic trees Leventhal, Gabriel E; Kouyos, Roger; Stadler, Tanja; Wyl, Viktor von; ... Bonhoeffer, Sebastian 2012
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Humoral immunity to HIV-1: kinetics of antibody responses in chronic infection reflects capacity of immune system to improve viral set point Trkola, Alexandra; Kuster, Herbert; Leemann, Christine; Oxenius, Annette; ... Gunthard, Huldrych 2004
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Human immunodeficiency virus type 1 fitness is a determining factor in viral rebound and set point in chronic infection Trkola, Alexandra; Kuster, Herbert; Leemann, Christine; Ruprecht, Claudia; ... Gunthard, Huldrych 2003
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Estimating the basic reproductive number from viral sequence data Stadler, Tanja; Kouyos, Roger; von Wyl, Viktor; Yerly Ferrillo, Sabine; ... Bonhoeffer, Sebastian 2012
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Emergence of minor populations of human immunodeficiency virus type 1 carrying the M184V and L90M mutations in subjects undergoing structured treatment interruptions Metzner, K. J.; Bonhoeffer, Sebastian; Fischer, Marek; Karanicolas, Rose; ... Gunthard, Huldrych 2003
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Dissecting HIV Virulence: Heritability of Setpoint Viral Load, CD4+ T-Cell Decline, and Per-Parasite Pathogenicity Bertels, Frederic; Marzel, Alex; Leventhal, Gabriel; Mitov, Venelin; ... Regoes, Roland R 2018
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Assessing Predicted HIV-1 Replicative Capacity in a Clinical Setting Kouyos, Roger D.; von Wyl, Viktor; Hinkley, Trevor; Petropoulos, Christos J.; ... Bonhoeffer, Sebastian 2011
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Ambiguous nucleotide calls from population-based sequencing of HIV-1 are a marker for viral diversity and the age of infection Kouyos, Roger D; von Wyl, Viktor; Yerly, Sabine; Böni, Jürg; ... Günthard, Huldrych F 2011