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Incidences of problematic cell lines are lower in papers that use RRIDs to identify cell lines Babic, Zeljana; Capes-Davis, Amanda; Martone, Maryann E; Bairoch, Amos Marc; ... Bandrowski, Anita E 2019
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Cell lines as biological models: practical steps for more reliable research Capes-Davis, Amanda; Bairoch, Amos Marc; Barrett, Tanya; Burnett, Edward C; ... Tian, Fang 2019
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A Standard Nomenclature for Referencing and Authentication of Pluripotent Stem Cells Kurtz, Andreas; Seltmann, Stefanie; Bairoch, Amos Marc; Bittner, Marie-Sophie; ... Xu, Ren-He 2018
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Kinases and Cancer Cicenas, Jonas; Zalyte, Egle; Bairoch, Amos Marc; Gaudet, Pascale 2018
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The Cellosaurus, a Cell-Line Knowledge Resource Bairoch, Amos Marc 2018
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Exploring the Uncharacterized Human Proteome Using neXtProt Duek, Paula Debora; Gateau, Alain; Bairoch, Amos Marc; Lane, Lydie 2018
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Large-Scale Reanalysis of Publicly Available HeLa Cell Proteomics Data in the Context of the Human Proteome Project Robin, Thibault; Bairoch, Amos Marc; Muller, Markus Johann; Lisacek, Frédérique; Lane, Lydie 2018
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A new bioinformatics tool to help assess the significance of BRCA1 variants Cusin, Isabelle; Teixeira, Daniel; Zahn, Monique; Rech De Laval, Valentine; ... Gaudet, Pascale 2018
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The neXtProt knowledgebase on human proteins: 2017 update Gaudet, Pascale; Michel, Pierre-André Albert; Zahn, Monique; Britan, Aurore; ... Bairoch, Amos Marc 2017
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Annotation of functional impact of voltage-gated sodium channel mutations Hinard, Valérie; Britan, Aurore; Schaeffer, Mathieu; Zahn, Monique; ... Gaudet, Pascale 2017
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Triage by ranking to support the curation of protein interactions Mottin, Luc; Pasche, Emilie; Gobeill, Julien; Rech De Laval, Valentine; ... Ruch, Patrick 2017
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ICEPO: the ion channel electrophysiology ontology Hinard, Valérie; Britan, Aurore; Rougier, Jean-Sébastien; Bairoch, Amos Marc; ... Gaudet, Pascale 2016
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The missing protein landscape of human chromosomes 2 and 14: progress and current status Duek, Paula; Bairoch, Amos Marc; Gateau, Alain; Vandenbrouck, Yves; Lane, Lydie 2016
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The neXtProt knowledgebase on human proteins: current status Gaudet, Pascale; Michel, Pierre-André Albert; Zahn, Monique; Cusin, Isabelle; ... Bairoch, Amos Marc 2015
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C11orf83, a Mitochondrial Cardiolipin-Binding Protein Involved in bc1 Complex Assembly and Supercomplex Stabilization Desmurs-Rousseau, Marjorie; Foti, Michelangelo; Raemy, Etienne; Vaz, Frédéric Maxime; ... Lane, Lydie 2015
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Creating a specialist protein resource network: a meeting report for the protein bioinformatics and community resources retreat Babbitt, Patricia C; Bagos, Pantelis G; Bairoch, Amos Marc; Bateman, Alex; ... Vriend, Gerrit 2015
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N-terminome analysis of the human mitochondrial proteome Vaca Jacome, Alvaro Sebastian; Rabilloud, Thierry; Schaeffer-Reiss, Christine; Rompais, Magali; ... Carapito, Christine 2015
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Deep Question Answering for protein annotation Gobeill, Julien; Gaudinat, Arnaud; Pasche, Emilie; Vishnyakova, Dina; ... Ruch, Patrick 2015
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Converting neXtProt into Linked Data and nanopublications Chichester, Christine; Karch, Olivier; Gaudet, Pascale; Lane, Lydie; ... Bairoch, Amos Marc 2015
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Key challenges for the creation and maintenance of specialist protein resources Holliday, Gemma L; Bairoch, Amos Marc; Bagos, Pantelis G; Chatonnet, Arnaud; ... Bateman, Alex 2015
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Standards for Reporting Enzyme Data: The STRENDA Consortium: What it aims to do and why it should be helpful Tipton, Keith F.; Armstrong, Richard N.; Bakker, Barbara M.; Bairoch, Amos Marc; ... Steinbeck, Christoph 2014
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Metrics for the Human Proteome Project 2013-2014 and strategies for finding missing proteins Lane, Lydie; Bairoch, Amos Marc; Beavis, Ronald C; Deutsch, Eric W; ... Omenn, Gilbert S 2014
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DERA is the human deoxyribose phosphate aldolase and is involved in stress response Salleron, Lisa; Magistrelli, Giovanni; Mary, Camille; Fischer, Nicolas; ... Lane, Lydie 2014
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Querying neXtProt nanopublications and their value for insights on sequence variants and tissue expression Chichester, Christine; Gaudet, Pascale; Karch, Oliver; Groth, Paul; ... Loizou, Antonis 2014
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Fifteen years SIB Swiss Institute of Bioinformatics: life science databases, tools and support Stockinger, Heinz; Altenhoff, Adrian M; Arnold, Konstantin; Bairoch, Amos Marc; ... Appel, Ron David 2014
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C2orf62 and TTC17 are involved in actin organization and ciliogenesis in zebrafish and human Bontems, Franck; Fish, Richard; Rossitto-Borlat, Irène; Lembo, Frédérique; ... Lane, Lydie 2014
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A chromosome-centric human proteome project (C-HPP) to characterize the sets of proteins encoded in chromosome 17 Liu, Suli; Im, Hogune; Bairoch, Amos Marc; Cristofanilli, Massimo; ... Hancock, William S 2013
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neXtProt: organizing protein knowledge in the context of human proteome projects Gaudet, Pascale; Argoud-puy, Ghislaine; Cusin, Isabelle; Duek, Paula Debora; ... Lane, Lydie 2013
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neXtProt: a knowledge platform for human proteins Lane, Lydie; Argoud-puy, Ghislaine; Britan, Aurore; Cusin, Isabelle; ... Bairoch, Amos Marc 2012
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Functional identification of APIP as human mtnB, a key enzyme in the methionine salvage pathway Mary, Camille; Duek, Paula Debora; Salleron, Lisa; Tienz, Petra; ... Lane, Lydie 2012
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UniPathway: a resource for the exploration and annotation of metabolic pathways Morgat, Anne; Coissac, Eric; Coudert, Elisabeth; Axelsen, Kristian Buhl; ... Viari, Alain 2012
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Standard guidelines for the chromosome-centric human proteome project Paik, Young-Ki; Omenn, Gilbert S; Uhlen, Mathias; Hanash, Samir; ... Hancock, William S 2012
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The Chromosome-Centric Human Proteome Project for cataloging proteins encoded in the genome Paik, Young-Ki; Jeong, Seul-Ki; Omenn, Gilbert S; Uhlen, Mathias; ... Hancock, William S 2012
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The human proteome project: current state and future direction Legrain, Pierre; Aebersold, Ruedi; Archakov, Alexander; Bairoch, Amos Marc; ... Omenn, Gilbert S 2011
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ViralZone: a knowledge resource to understand virus diversity Hulo, Chantal; De Castro, Eduardo; Masson, Patrick Marc David; Bougueleret, Lydie; ... Le Mercier, Philippe 2011
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A preliminary study on the prediction of human protein functions Bologna, Guido; Veuthey, Anne-Lise; Pagni, Marco; Lane, Lydie; Bairoch, Amos Marc 2011
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Towards BioDBcore: a community-defined information specification for biological databases Gaudet, Pascale; Bairoch, Amos Marc 2011
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Mass spectrometry in high-throughput proteomics: ready for the big time Nilsson, Tommy; Mann, Matthias; Aebersold, Ruedi; Yates, John R (3rd); ... Bergeron, John J M 2010
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OpenFluDB, a database for human and animal influenza virus Liechti, Robin; Gleizes, Anne; Kuznetsov, Dmitry; Bougueleret, Lydie; ... Xenarios, Ioannis 2010
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PROSITE, a protein domain database for functional characterization and annotation Sigrist, Christian; Cerutti, Lorenzo; De Castro, Eduardo; Langendijk Genevaux, Petra Simone; ... Hulo, Nicolas 2010
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Animal Toxins: How is Complexity Represented in Databases? Jungo, Florence; Estreicher Von Rozbierski, Anne Isabelle; Bairoch, Amos Marc; Bougueleret, Lydie; Xenarios, Ioannis 2010
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A large-scale protein-function database Apweiler, Rolf; Armstrong, Richard; Bairoch, Amos Marc; Cornish-Bowden, Athel; ... Tipton, Keith 2010
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Human aldehyde dehydrogenase genes: alternatively spliced transcriptional variants and their suggested nomenclature Black, William J.; Stagos, Dimitrios; Marchitti, Satori A.; Nebert, Daniel W.; ... Vasiliou, Vasilis 2009
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Managing the data explosion. A report on the HUPO-PSI Workshop. August 2008, Amsterdam, The Netherlands Orchard, Sandra; Hoogland, Christine; Bairoch, Amos Marc; Eisenacher, Martin; ... Binz, Pierre-Alain 2009
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The UniProtKB/Swiss-Prot knowledgebase and its Plant Proteome Annotation Program Schneider, Michel; Lane, Lydie; Boutet, Emmanuel; Lieberherr, Damien; ... Bairoch, Amos Marc 2009
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HAMAP: a database of completely sequenced microbial proteome sets and manually curated microbial protein families in UniProtKB/Swiss-Prot De Oliveira Lima, Tania; Auchincloss Damay, Andréa; Coudert, Elisabeth; Keller, Guillaume Bertrand; ... Bairoch, Amos Marc 2009
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Infrastructure for the life sciences: design and implementation of the UniProt website Jain, Eric; Bairoch, Amos Marc; Duvaud, Séverine; Phan, Isabelle; ... Gasteiger, Elisabeth 2009
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UniProtKB/Swiss-Prot manual and automated annotation of complete proteomes: the Dictyostelium discoideum case study Bairoch, Amos Marc; Lane, Lydie 2009
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InterPro: the integrative protein signature database Hunter, Sarah; Bairoch, Amos Marc; Hulo, Nicolas; Sigrist, Christian 2009
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CTdatabase: a knowledge-base of high-throughput and curated data on cancer-testis antigens Almeida, Luiz Gonzaga; Sakabe, Noboru J.; deOliveira, A. R.; Silva, M. C.; ... Vasconcelos, A. T. 2009
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