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Experimental evidence for slipped loop DNA, a novel folding type for polynucleotide chain Minyat, E E; Khomyakova, E B; Petrova, M V; Zdobnov, Evgeny; Ivanov, V I 1995
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Three-dimensional model for slipped loop RNA. Farutin, V A; Gorin, A A; Zdobnov, Evgeny; Ivanov, V I 1997
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A pseudoknot-compatible universal site is located in the large ribosomal RNA in the peptidyltransferase center Ivanov, V I; Bondarenko, S A; Zdobnov, Evgeny; Beniaminov, A D; ... Ulyanov, N B 1999
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InterPro--an integrated documentation resource for protein families, domains and functional sites Apweiler, R; Attwood, T K; Bairoch, Amos Marc; Bateman, A; ... Zdobnov, Evgeny 2000
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The InterPro database, an integrated documentation resource for protein families, domains and functional sites Apweiler, Rolf; Attwood, Teresa K; Bairoch, Amos Marc; Bateman, Alex; ... Zdobnov, Evgeny 2001
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Proteome Analysis Database: online application of InterPro and CluSTr for the functional classification of proteins in whole genomes Apweiler, R; Biswas, M; Fleischmann, W; Kanapin, A; ... Zdobnov, Evgeny 2001
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CluSTr: a database of clusters of SWISS-PROT+TrEMBL proteins Kriventseva, Evgenia; Fleischmann, Wolfgang; Zdobnov, Evgeny; Apweiler, Rolf 2001
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InterProScan--an integration platform for the signature-recognition methods in InterPro Zdobnov, Evgeny; Apweiler, Rolf 2001
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Bioinformatics: using the molecular biology data Zdobnov, Evgeny; Lopez, Rodrigo; Apweiler, Rolf; Etzold, Thure 2001
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Interactive InterPro-based comparisons of proteins in whole genomes Kanapin, A; Apweiler, R; Biswas, M; Fleischmann, W; ... Zdobnov, Evgeny 2002
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Comparative genomic analysis in the region of a major Plasmodium-refractoriness locus of Anopheles gambiae Thomasova, Dana; Ton, Lucas Q; Copley, Richard R; Zdobnov, Evgeny; ... Collins, Frank H 2002
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The EBI SRS server - recent developments Zdobnov, Evgeny; Lopez, Rodrigo; Apweiler, Rolf; Etzold, Thure 2002
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The EBI SRS server - new features Zdobnov, Evgeny; Lopez, Rodrigo; Apweiler, Rolf; Etzold, Thure 2002
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Comparative genome and proteome analysis of Anopheles gambiae and Drosophila melanogaster Zdobnov, Evgeny; von Mering, Christian; Letunic, Ivica; Torrents, David; ... Bork, Peer 2002
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Immunity-related genes and gene families in Anopheles gambiae Christophides, G. K.; Zdobnov, Evgeny; Barillas-Mury, Carolina; Birney, Ewan; ... Kafatos, F. C. 2002
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A genome-wide survey of human pseudogenes Torrents, David; Suyama, Mikita; Zdobnov, Evgeny; Bork, Peer 2003
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Genome evolution reveals biochemical networks and functional modules von Mering, Christian; Zdobnov, Evgeny; Tsoka, Sophia; Ciccarelli, Francesca D; ... Bork, Peer 2003
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Have fun, Be useful Zdobnov, Evgeny 2003
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Comparative architectures of mammalian and chicken genomes reveal highly variable rates of genomic rearrangements across different lineages Bourque, Guillaume; Zdobnov, Evgeny; Bork, Peer; Pevzner, Pavel A; Tesler, Glenn 2005
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AnoEST: toward A. gambiae functional genomics Kriventseva, Evgenia; Koutsos, Anastasios C; Blass, Claudia; Kafatos, Fotis C; ... Zdobnov, Evgeny 2005
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Protein coding potential of retroviruses and other transposable elements in vertebrate genomes Zdobnov, Evgeny; Campillos, Mónica; Harrington, Eoghan D; Torrents, David; Bork, Peer 2005
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Consistency of genome-based methods in measuring Metazoan evolution Zdobnov, Evgeny; von Mering, Christian; Letunic, Ivica; Bork, Peer 2005
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Overgrowth caused by misexpression of a microRNA with dispensable wild-type function Nairz, Knud; Rottig, Carmen; Rintelen, Felix; Zdobnov, Evgeny; ... Hafen, Ernst 2006
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Evolution of genes and genomes on the Drosophila phylogeny Drosophila 12 Genomes Consortium 2007
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New complete genome sequences of human rhinoviruses shed light on their phylogeny and genomic features Tapparel, Caroline; Junier, Thomas; Gerlach, Daniel; Cordey, Samuel; ... Kaiser, Laurent 2007
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Evolutionary dynamics of immune-related genes and pathways in disease-vector mosquitoes Waterhouse, R. M.; Kriventseva, E. V.; Meister, Stephan; Xi, Zhiyong; ... Christophides, G. K. 2007
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Computational and transcriptional evidence for microRNAs in the honey bee genome Weaver, D. B.; Anzola, J. M.; Evans, J. D.; Reid, J. G.; ... Elsik, C. G. 2007
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Quantification of ortholog losses in insects and vertebrates Wyder, Stefan; Kriventseva, E. V.; Schroder, Reinhard; Kadowaki, Tatsuhiko; Zdobnov, Evgeny 2007
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Life cycle transcriptome of the malaria mosquito Anopheles gambiae and comparison with the fruitfly Drosophila melanogaster Koutsos, A. C.; Blass, Claudia; Meister, Stephan; Schmidt, Sabine; ... Christophides, G. K. 2007
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VectorBase: a home for invertebrate vectors of human pathogens Lawson, Daniel; Arensburger, Peter; Atkinson, Peter; Besansky, N. J.; ... Collins, F. H. 2007
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Quantification of insect genome divergence Zdobnov, Evgeny; Bork, Peer 2007
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OrthoDB: the hierarchical catalog of eukaryotic orthologs Kriventseva, Evgenia; Rahman, Nazim; Espinosa, Octavio; Zdobnov, Evgeny 2008
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The cis-acting replication elements define human enterovirus and rhinovirus species Cordey, Samuel; Gerlach, Daniel; Junier, Thomas; Zdobnov, Evgeny; ... Tapparel, Caroline 2008
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Mapping of small RNAs in the human ENCODE regions Borel, Christelle; Gagnebin, Maryline; Gehrig, Corinne; Kriventseva, Evgenia; ... Antonarakis, Stylianos 2008
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Drug resistance in newly HIV diagnosed individuals: transmission rate, clusters and persistence Yerly Ferrillo, Sabine; Junier, Thomas; Boffi, E.; Gunthard, H. F.; ... Kaiser, Laurent 2008
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The Aedes aegypti genome: a comparative perspective Waterhouse, R. M.; Wyder, Stefan; Zdobnov, Evgeny 2008
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Sertoli cell Dicer is essential for spermatogenesis in mice Papaioannou, Maria-Eleni; Pitetti, Jean-Luc; Ro, Seungil; Park, Chanjae; ... Nef, Serge 2009
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Expression profiles of urbilaterian genes uniquely shared between honey bee and vertebrates Matsui, Toshiaki; Yamamoto, Toshiyuki; Wyder, Stefan; Zdobnov, Evgeny; Kadowaki, Tatsuhiko 2009
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Comparative Genome Analysis Waterhouse, Robert; Kriventseva, Evgenia; Zdobnov, Evgeny 2009
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Comparative Genomics of Insect Immunity Kafatos, Fotis; Waterhouse, Robert; Zdobnov, Evgeny; Christophides, George 2009
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miROrtho: computational survey of microRNA genes Gerlach, Daniel; Kriventseva, Evgenia; Rahman, Nazim; Vejnar, Charles; Zdobnov, Evgeny 2009
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The bovine lactation genome: insights into the evolution of mammalian milk Lemay, Danielle G.; Lynn, David J.; Martin, William F.; Neville, Margaret C.; ... Rijnkels, Monique 2009
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New respiratory enterovirus and recombinant rhinoviruses among circulating picornaviruses Tapparel, Caroline; Junier, Thomas; Gerlach, Daniel; Van-Belle, Sandra; ... Kaiser, Laurent 2009
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The impact of transmission clusters on primary drug resistance in newly diagnosed HIV-1 infection Yerly Ferrillo, Sabine; Junier, Thomas; Gayet-Ageron, Angèle; Boffi El Amari, Emmanuelle Jane; ... Kaiser, Laurent 2009
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Impact of newly HIV diagnosed individuals on the transmission of drug resistance Yerly Ferrillo, Sabine; Junier, Thomas; Gayet-Ageron, Angèle; El Amari, E. Boffi; ... Kaiser, Laurent 2009
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Integration of microRNA miR-122 in hepatic circadian gene expression Gatfield, David; Le Martelot, Gwendal; Vejnar, Charles; Gerlach, Daniel; ... Schibler, Ulrich 2009
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Functional characterization of transcription factor motifs using cross-species comparison across large evolutionary distances Kim, Jaebum; Cunningham, Ryan; James, Brian; Wyder, Stefan; ... Sinha, Saurabh 2010
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The Newick utilities: high-throughput phylogenetic tree processing in the UNIX shell Junier, Thomas; Zdobnov, Evgeny 2010
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Pathogenomics of Culex quinquefasciatus and meta-analysis of infection responses to diverse pathogens Bartholomay, Lyric C.; Waterhouse, Robert; Mayhew, George F.; Campbell, Corey L.; ... Muskavitch, Marc A. T. 2010
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A teratocarcinoma-like human embryonic stem cell (hESC) line and four hESC lines reveal potentially oncogenic genomic changes Hovatta, Outi; Jaconi, Marisa; Tohonen, Virpi; Bena, Frédérique; ... Feki, Anis 2010
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