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The ReproGenomics Viewer: a multi-omics and cross-species resource compatible with single-cell studies for the reproductive science community Darde, Thomas A; Lecluze, Estelle; Lardenois, Aurélie; Stevant, Isabelle; ... Chalmel, Frédéric 2019
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Identification of metabolites from tandem mass spectra with a machine learning approach utilizing structural features Li, Yuanyue; Kuhn, Michael; Gavin Perrin, Anne-Claude; Bork, Peer 2019
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SPLATCHE3: simulation of serial genetic data under spatially explicit evolutionary scenarios including long-distance dispersal Currat, Mathias; Arenas, Miguel; Quilodran, Claudio; Excoffier, Laurent; Ray, Nicolas 2019
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The neXtProt peptide uniqueness checker: a tool for the proteomics community Schaeffer, Mathieu; Gateau, Alain; Teixeira, Daniel; Michel, Pierre-André Albert; ... Lane, Lydie 2017
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MBV: a method to solve sample mislabeling and detect technical bias in large combined genotype and sequencing assay datasets Fort, Alexandre; Panousis, Nikolaos; Garieri, Marco; Antonarakis, Stylianos; ... Delaneau, Olivier 2017
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Accelerating Bayesian inference for evolutionary biology models Meyer, Xavier; Chopard, Bastien; Salamin, Nicolas 2017
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Muscle Tissue Labeling of Human Lower Limb in Multi-Channel mDixon MR Imaging: Concepts and Applications Becker, Matthias; Magnenat Thalmann, Nadia 2017
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Fast and efficient QTL mapper for thousands of molecular phenotypes Ongen, Halit; Buil Demur, Alfonso Alberto; Brown, Andrew Anand; Dermitzakis, Emmanouil; Delaneau, Olivier 2016
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Large-scale inference of conjunctive Bayesian networks Montazeri, Hesam; Kuipers, Jack; Kouyos, Roger; Böni, Jürg; ... Beerenwinkel, Niko 2016
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Assessing statistical significance in multivariable genome wide association analysis Buzdugan, Laura; Kalisch, Markus; Navarro, Arcadi; Schunk, Daniel; ... Bühlmann, Peter 2016
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Assessing allele-specific expression across multiple tissues from RNA-seq read data Pirinen, Matti; Lappalainen, Tuuli Emilia; Zaitlen, Noah A; Dermitzakis, Emmanouil; ... Rivas, Manuel A 2015
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Correction to: "Forward-in-Time, Spatially Explicit Modeling Software to Simulate Genetic Lineages Under Selection" Currat, Mathias; Gerbault, Pascale; Di, Da; Nunes, Jose Manuel; Sanchez-Mazas, Alicia 2015
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Forward-in-Time, Spatially Explicit Modeling Software to Simulate Genetic Lineages Under Selection Currat, Mathias; Gerbault, Pascale; Di, Da; Nunes, Jose Manuel; Sanchez-Mazas, Alicia 2015
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CATCHing putative causative variants in consanguineous families Santoni, Federico; Makrythanasis, Periklis; Antonarakis, Stylianos 2015
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BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs Simao Neto, Felipe; Waterhouse, Robert; Ioannidis, Panagiotis; Kriventseva, Evgenia; Zdobnov, Evgeny 2015
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EMOTE-conv: A Computational Pipeline to Convert Exact Mapping of Transcriptome Ends (EMOTE) Data to the Lists of Quantified Genomic Positions Correlated to Related Genomic Information Redder, Peter; Yasrebi, Haleh 2015
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Development and tuning of an original search engine for patent libraries in medicinal chemistry Pasche, Emilie; Gobeill, Julien; Kreim, Olivier; Oezdemir-Zaech, Fatma; ... Ruch, Patrick 2014
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Identification and removal of low-complexity sites in allele-specific analysis of ChIP-seq data Waszak, Sebastian M; Kilpinen, Leena Helena; Gschwind, Andreas R; Orioli, Andrea; ... Deplancke, Bart 2014
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De novo finished 2.8 Mbp Staphylococcus aureus genome assembly from 100 bp short and long range paired-end reads Hernandez, David; Tewhey, Ryan; Veyrieras, Jean-Baptiste; Farinelli, Laurent Luca Denis; ... Schrenzel, Jacques 2014
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Big data and other challenges in the quest for orthologs Sonnhammer, E. L. L.; Gabaldon, T.; Sousa da Silva, A. W.; Martin, M.; ... Dessimoz, C. 2014
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