DT
Teodoro, Douglas
| Title | Published in | Access level | OA Policy | Year | Views | Downloads | |
|---|---|---|---|---|---|---|---|
| The evolving landscape of large language models and non-large language models in health care | npj health systems |  | 2026 | 2 | 9 | ||
| HealthContradict : Evaluating biomedical knowledge conflicts in language models | npj digital medicine | | 2026 | 12 | 17 | ||
| A dataset for evaluating clinical research claims in large language models | Scientific data | | 2025 | 110 | 340 | ||
| Analysis of eligibility criteria clusters based on large language models for clinical trial design | Journal of the American Medical Informatics Association | | 2025 | 175 | 223 | ||
| Leveraging Large Language Models for Synthetic Data Generation to Enhance Adverse Drug Event Detection in Tweets | Intelligent Health Systems – From Technology to Data and Knowledge | | 2025 | 38 | 144 | ||
| Synthesising evidence regarding artificial intelligence-generated radiological reports based on medical images : a scoping review protocol | BMJ open | | 2025 | 27 | 35 | ||
| Medical Dialogue Audio Transcription : Dataset and Benchmarking of ASR Models | Proceedings of the 7th Dataset Showcase Workshop (DSW 2025) | | 2025 | 2 | 0 | ||
| An evaluation benchmark for adverse drug event prediction from clinical trial results | Scientific data | | 2025 | 59 | 38 | ||
| Assessment of Machine Learning Algorithms to Predict Medical Specialty Choice | Studies in health technology and informatics | | 2025 | 55 | 73 | ||
| MMLU-ProX : A Multilingual Benchmark for Advanced Large Language Model Evaluation | Proceedings of the 2025 Conference on Empirical Methods in Natural Language Processing | | 2025 | 8 | 145 | ||
| Comparing neural language models for medical concept representation and patient trajectory prediction | Artificial intelligence in medicine | | 2025 | 37 | 75 | ||
| Assessment of elapsed time between dental radiographs using Siamese network | Studies in health technology and informatics | | 2025 | 48 | 147 | ||
| Exploring Zero-Shot Cross-Lingual Biomedical Concept Normalization via Large Language Models | Intelligent Health Systems – From Technology to Data and Knowledge | | 2025 | 25 | 180 | ||
| DS4DH group at ImageCLEFmedical caption 2025 : Notebook for the DS4DH Lab at CLEF 2025 | CEUR workshop proceedings | | 2025 | 8 | 14 | ||
| A machine learning approach for automating review of a RxNorm medication mapping pipeline output | Journal of biomedical informatics |  | 2025 | 32 | 0 | ||
| A scoping review of artificial intelligence applications in clinical trial risk assessment | npj digital medicine | | 2025 | 55 | 231 | ||
| ICU-TSB : A Benchmark for Temporal Patient Representation Learning for Unsupervised Stratification into Patient Cohorts | Proceedings - IEEE Symposium on Computer-Based Medical Systems | | 2025 | 31 | 1 | ||
| STM-GNN : Space-Time-and-Memory Graph Neural Networks for Predicting Multi-Drug Resistance Risks in Dynamic Patient Networks | Artificial Intelligence in Medicine : 23rd International Conference, AIME 2025, Pavia, Italy, June 23–26, 2025, Proceedings, Part I | | 2025 | 15 | 0 | ||
| Exploring Medical Career Choice to Better Inform Swiss Physician Workforce Planning: Protocol for a National Cohort Study | JMIR Research Protocols | | 2024 | 140 | 159 | ||
| Did high frequency phone surveys during the COVID-19 pandemic include disability questions? An assessment of COVID-19 surveys from March 2020 to December 2022 | BMJ open | | 2024 | 99 | 94 | ||
| PRIMIS : Privacy-preserving medical image sharing via deep sparsifying transform learning with obfuscation | Journal of biomedical informatics | | 2024 | 80 | 1 | ||
| Online health search via multi-dimensional information quality assessment based on deep language models | JMIR AI | | 2024 | 108 | 322 | ||
| A Dataset for Evaluating Contextualized Representation of Biomedical Concepts in Language Models | Scientific data | | 2024 | 201 | 41 | ||
| Ensemble of deep learning language models to support the creation of living systematic reviews for the COVID-19 literature | Systematic reviews | | 2023 | 119 | 129 | ||
| Detection of Patients at Risk of Multi-Drug Resistant Enterobacteriaceae Infection using Graph Neural Networks: a Retrospective Study | Health data science | | 2023 | 161 | 60 | ||
| Deep learning-based risk prediction for interventional clinical trials based on protocol design: A retrospective study | Patterns | | 2023 | 215 | 108 | ||
| CardioBERTpt: Transformer-based Models for Cardiology Language Representation in Portuguese | 36th International Symposium on Computer-Based Medical Systems (CBMS) | | 2023 | 115 | 333 | ||
| Transformer Performance for Chemical Reactions: Analysis of Different Predictive and Evaluation Scenarios | Journal of chemical information and modeling | | 2023 | 106 | 102 | ||
| DS4DH at MEDIQA-Chat 2023: Leveraging SVM and GPT-3 Prompt Engineering for Medical Dialogue Classification and Summarization | Proceedings of the 5th Clinical Natural Language Processing Workshop | | 2023 | 114 | 1,246 | ||
| Leveraging patient similarities via graph neural networks to predict phenotypes from temporal data | 2023 IEEE 10th International Conference on Data Science and Advanced Analytics (DSAA) | | 2023 | 104 | 2 | ||
| Data resource profile: the disability statistics questionnaire review database (DS-QR Database) : a database of population censuses and household surveys with internationally comparable disability questions | International journal of population data science | | 2023 | 59 | 100 | ||
| Cluster analysis of low-dimensional medical concept representations from Electronic Health Records | Health Information Science. HIS 2022. | | 2022 | 486 | 203 | ||
| Reducing systematic review burden using Deduklick: a novel, automated, reliable, and explainable deduplication algorithm to foster medical research | Systematic reviews | | 2022 | 311 | 233 | ||
| Analyzing the Information Content of Text-Based Files in Supplementary Materials of Biomedical Literature | Studies in health technology and informatics | | 2022 | 246 | 132 | ||
| Vessel Destination Prediction Using a Graph-Based Machine Learning Model | Network Science - 7th International Winter Conference, NetSci-X 2022 Porto, Portugal, February 8–11, 2022 Proceedings | | 2022 | 262 | 1 | ||
| Designing an Optimal Expansion Method to Improve the Recall of a Genomic Variant Curation-Support Service | Studies in health technology and informatics | | 2022 | 203 | 199 | ||
| Efficient Joint Learning for Clinical Named Entity Recognition and Relation Extraction Using Fourier Networks: A Use Case in Adverse Drug Events | Proceedings of the 19th International Conference on Natural Language Processing (ICON) | | 2022 | 266 | 147 | ||
| DS4DH at SemEval-2022 Task 11: Multilingual Named Entity Recognition Using an Ensemble of Transformer-based Language Models | Proceedings of the 16th International Workshop on Semantic Evaluation (SemEval-2022) | | 2022 | 182 | 176 | ||
| DS4DH at TREC Health Misinformation 2021: Multi-Dimensional Ranking Models with Transfer Learning and Rank Fusion | The Thirtieth REtrieval Conference Proceedings (TREC 2021) | | 2022 | 339 | 196 | ||
| On Graph Construction for Classification of Clinical Trials Protocols Using Graph Neural Networks | International Conference on Artificial Intelligence in Medicine. AIME 2022. | | 2022 | 295 | 196 | ||
| UniProt: the universal protein knowledgebase in 2021 | Nucleic acids research | | 2021 | 257 | 178 | ||
| Ensemble of Deep Masked Language Models for Effective Named Entity Recognition in Health and Life Science Corpora | Frontiers in research metrics and analytics | | 2021 | 334 | 189 | ||
| Utilizing Artificial Intelligence to Manage COVID-19 Scientific Evidence Torrent with Risklick AI: A Critical Tool for Pharmacology and Therapy Development | Pharmacology | | 2021 | 331 | 315 | ||
| Classification of hierarchical text using geometric deep learning: the case of clinical trials corpus | Proceedings of the 2021 Conference on Empirical Methods in Natural Language Processing (EMNLP) | | 2021 | 251 | 158 | ||
| Vaccine Development in the Time of COVID-19: The Relevance of the Risklick AI to Assist in Risk Assessment and Optimize Performance | Frontiers in digital health | | 2021 | 296 | 124 | ||
| Information Retrieval in an Infodemic: The Case of COVID-19 Publications | JMIR. Journal of medical internet research | | 2021 | 219 | 688 | ||
| Drug-protein relation extraction using ensemble of transformer-based language models | Proceedings of the BioCreative VII Challenge Evaluation Workshop | | 2021 | 184 | 323 | ||
| An Extended Overview of the CLEF 2020 ChEMU Lab: Information Extraction of Chemical Reactions from Patents | Proceedings of CLEF (Conference and Labs of the Evaluation Forum) 2020 Working Notes | | 2020 | 324 | 424 | ||
| Named entity recognition in chemical patents using ensemble of contextual language models | Proceedings of CLEF (Conference and Labs of the Evaluation Forum) 2020 Working Notes | | 2020 | 172 | 442 | ||
| BiTeM at WNUT 2020 Shared Task-1: Named Entity Recognition over Wet Lab Protocols using an Ensemble of Contextual Language Models | Proceedings of the 2020 EMNLP Workshop W-NUT: The Sixth Workshop on Noisy User-generated Text | | 2020 | 369 | 159 | ||
| BioBERTpt - A Portuguese Neural Language Model for Clinical Named Entity Recognition | Proceedings of the 3rd Clinical Natural Language Processing Workshop | | 2020 | 584 | 663 | ||
| UPCLASS: a deep learning-based classifier for UniProtKB entry publications | Database | | 2020 | 269 | 144 | ||
| A Multilabel Approach to Portuguese Clinical Named Entity Recognition | Journal of Health Informatics | | 2020 | 272 | 267 | ||
| Contextualized French Language Models for Biomedical Named Entity Recognition | Actes de la 6e conférence conjointe Journées d'Études sur la Parole (JEP, 33e édition), Traitement Automatique des Langues Naturelles (TALN, 27e édition), Rencontre des Étudiants Chercheurs en Informatique pour le Traitement Automatique des Langues (RÉCITAL, 22e édition). Atelier DÉfi Fouille de Textes | | 2020 | 405 | 495 | ||
| SIB Text Mining at TREC 2019 Deep Learning Track: Working Note | The Twenty-Eighth Text REtrieval Conference (TREC 2019) Proceedings | | 2019 | 230 | 274 | ||
| A Baseline Approach for Early Detection of Signs of Anorexia and Self-harm in Reddit Posts | Proceedings of CLEF (Conference and Labs of the Evaluation Forum) 2019 Working Notes | | 2019 | 342 | 444 | ||
| A Data-Driven Approach for Measuring the Severity of the Signs of Depression using Reddit Posts | Proceedings of CLEF (Conference and Labs of the Evaluation Forum) 2019 Working Notes | | 2019 | 240 | 256 | ||
| ORBDA: An openEHR benchmark dataset for performance assessment of electronic health record servers | PloS one | | 2018 | 232 | 285 | ||
| Improving average ranking precision in user searches for biomedical research datasets | Database | | 2017 | 180 | 130 | ||
| Design of an integrated analytics platform for healthcare assessment centered on the episode of care | Journal of Health Informatics | | 2016 | 154 | 143 | ||
| Comparing the Performance of NoSQL Approaches for Managing Archetype-Based Electronic Health Record Data | PloS one | | 2016 | 190 | 179 | ||
| DebugIT: Ontology-mediated layered Data Integration for real-time Antibiotics Resistance Surveillance | Proceedings of the 7th International Workshop on Semantic Web Applications and Tools for Life Sciences (SWAT4LS 2014) | | 2014 | 402 | 86 | ||
| Archetypes for Representing Data about the Brazilian Public Hospital Information System and Outpatient High Complexity Procedures System | XIV Congresso Brasileiro em Informática em Saúde – CBIS 2014 | | 2014 | 151 | 154 | ||
| Challenges in the Implementation of a Mobile Application in Clinical Practice: Case Study in the Context of an Application that Manages the Daily Interventions of Nurses | JMIR mhealth and uhealth | | 2013 | 1,084 | 702 | ||
| Empirical mode decomposition and k-nearest embedding vectors for timely analyses of antibiotic resistance trends | PloS one | | 2013 | 875 | 310 | ||
| Assisted knowledge discovery for the maintenance of clinical guidelines | PloS one | | 2013 | 1,010 | 366 | ||
| An advanced search engine for patent analytics in medicinal chemistry | Studies in health technology and informatics | | 2012 | 794 | 143 | ||
| A user-friendly tool for medical-related patent retrieval | Studies in health technology and informatics | | 2012 | 843 | 0 | ||
| Assister la création de guides de bonnes pratiques par des techniques de recherche d'information | Swiss medical informatics | | 2012 | 859 | 0 | ||
| Data Definition Ontology for clinical data integration and querying | Studies in health technology and informatics | | 2012 | 224 | 206 | ||
| Data integration and trend analysis for surveillance of antimicrobial resistance | | 2012 | 1,227 | 927 | |||
| Building a transnational biosurveillance network using semantic web technologies: requirements, design, and preliminary evaluation | JMIR. Journal of medical internet research | | 2012 | 884 | 0 | ||
| Pathogens and gene product normalization in the biomedical literature | Studies in health technology and informatics | | 2012 | 935 | 425 | ||
| Using multimodal mining to drive clinical guidelines development | Studies in health technology and informatics | | 2011 | 873 | 202 | ||
| A cross-site antimicrobial resistance surveillance system using semantic web technologies | International Conference on Prevention & Infection Control (ICPIC 2011) | | 2011 | 295 | 96 | ||
| Interoperability driven integration of biomedical data sources | Studies in health technology and informatics | | 2011 | 943 | 540 | ||
| KART, a knowledge authoring and refinement tool for clinical guidelines development | BMC proceedings | | 2011 | 864 | 335 | ||
| Ensuring HL7-based information model requirements within an ontology framework | Studies in health technology and informatics | | 2010 | 156 | 132 | ||
| The DebugIT core ontology: semantic integration of antibiotics resistance patterns | Studies in health technology and informatics | | 2010 | 274 | 112 | ||
| Automatic medical knowledge acquisition using question-answering | Studies in health technology and informatics | | 2009 | 756 | 181 | ||
| Biomedical data management: a proposal framework | Studies in health technology and informatics | | 2009 | 258 | 104 | ||
| QA-driven guidelines generation for bacteriotherapy | AMIA ... Annual Symposium proceedings | | 2009 | 805 | 0 |
