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| Title | Published in | Access level | OA Policy | Year | Views | Downloads | |
|---|---|---|---|---|---|---|---|
| Identification of causative agents of infective endocarditis by metagenomic next-generation sequencing of resected valves | Frontiers in cellular and infection microbiology |  | 2025 | 10 | 10 | ||
| A metagenomics method for the quantitative detection of bacterial pathogens causing hospital-associated and ventilator-associated pneumonia | Microbiology spectrum | | 2023 | 84 | 79 | ||
| Effect of bacterial DNA enrichment on detection and quantification of bacteria in an infected tissue model by metagenomic next-generation sequencing | ISME communications | | 2022 | 88 | 183 | ||
| Changes in the gut bacterial communities in colon cancer surgery patients: an observational study | Gut pathogens | | 2022 | 232 | 145 | ||
| Oral dysbiosis and inflammation in Parkinson's disease | Journal of Parkinson's Disease | | 2021 | 366 | 1,011 | ||
| Staphylococcus aureus Transcriptome Data and Metabolic Modelling Investigate the Interplay of Ser/Thr Kinase PknB, Its Phosphatase Stp, the glmR/yvcK Regulon and the cdaA Operon for Metabolic Adaptation | Microorganisms | | 2021 | 219 | 99 | ||
| Mycobacterium chelonae infection identified by metagenomic next-generation sequencing as the probable cause of acute contained rupture of a biological composite graft—a case report | International journal of molecular sciences | | 2021 | 214 | 185 | ||
| Metagenomic Characterization of Gut Microbiota of Carriers of Extended-Spectrum Beta-Lactamase or Carbapenemase-Producing Enterobacteriaceae Following Treatment with Oral Antibiotics and Fecal Microbiota Transplantation: Results from a Multicenter Randomized Trial | Microorganisms | | 2020 | 442 | 254 | ||
| Second Periprosthetic Joint Infection Caused by Streptococcus dysgalactiae: How Genomic Sequencing Can Help Defining the Best Therapeutic Strategy | Frontiers in Medicine | | 2020 | 386 | 158 | ||
| Septic shock caused by Capnocytophaga canis after a cat scratch | European Journal of Clinical Microbiology & Infectious Diseases |  | 2020 | 201 | 0 | ||
| Changes in microbiota profiles after prolonged frozen storage of stool suspensions | Frontiers in Cellular and Infection Microbiology | | 2020 | 394 | 236 | ||
| From genotype to antibiotic susceptibility phenotype in the order Enterobacterales: a clinical perspective | Clinical Microbiology and Infection | | 2020 | 406 | 1 | ||
| Listeria monocytogenes infectious periaortitis: a case report from the infectious disease standpoint | BMC Infectious Diseases | | 2019 | 607 | 207 | ||
| Next-Generation Sequencing for the Diagnosis of Challenging Culture-Negative Endocarditis | Frontiers in Medicine | | 2019 | 387 | 256 | ||
| Temperate prophages increase bacterial adhesin expression and virulence in an experimental model of endocarditis due to staphylococcus aureus from the cc398 lineage | Frontiers in Microbiology | | 2019 | 286 | 117 | ||
| Identification of respiratory microbiota markers in ventilator-associated pneumonia | Intensive Care Medicine | | 2019 | 373 | 182 | ||
| Genomic epidemiology of Neisseria meningitidis serogroup W in Switzerland between 2010 and 2016 | Journal of Infection | | 2019 | 349 | 0 | ||
| Rare Case of Community-Acquired Endocarditis Caused by Neisseria meningitidis Assessed by Clinical Metagenomics | Frontiers in Cardiovascular Medicine | | 2019 | 363 | 165 | ||
| The intestinal microbiota predisposes to traveler's diarrhea and to the carriage of multidrug-resistant enterobacteriaceae after traveling to tropical regions | Gut microbes | | 2019 | 305 | 268 | ||
| Differential daptomycin resistance development in Staphylococcus aureus strains with active and mutated gra regulatory systems | International Journal of Medical Microbiology | | 2018 | 327 | 0 | ||
| Root microbiota in primary and secondary apical periodontitis | Frontiers in Microbiology | | 2018 | 650 | 355 | ||
| When Bacterial Culture Fails, Metagenomics Can Help: A Case of Chronic Hepatic Brucelloma Assessed by Next-Generation Sequencing | Frontiers in Microbiology | | 2018 | 518 | 226 | ||
| In vivo selection of a multidrug-resistant Aeromonas salmonicida during medicinal leech therapy | New Microbes and New Infections | | 2018 | 1,570 | 0 | ||
| Clinical metagenomics of bone and joint infections: a proof of concept study | Scientific Reports | | 2017 | 614 | 385 | ||
| Detection of Bacterial Pathogens from Broncho-Alveolar Lavage by Next-Generation Sequencing | International Journal of Molecular Sciences | | 2017 | 472 | 307 | ||
| Decontamination of 16S rRNA gene amplicon sequence datasets based on bacterial load assessment by qPCR | BMC Microbiology | | 2016 | 502 | 236 | ||
| GdpS contributes to Staphylococcus aureus biofilm formation by regulation of eDNA release | International journal of medical microbiology | | 2014 | 667 | 2 | ||
| Challenges in the culture-independent analysis of oral and respiratory samples from intubated patients | Frontiers in cellular and infection microbiology | | 2014 | 733 | 289 | ||
| Noma affected children from niger have distinct oral microbial communities based on high-throughput sequencing of 16S rRNA gene fragments | PLoS neglected tropical diseases | | 2014 | 698 | 301 | ||
| Microarray Analysis of Microbiota of Gingival Lesions in Noma Patients | PLoS neglected tropical diseases | | 2013 | 726 | 1,097 | ||
| The CshA DEAD-box RNA helicase is important for quorum sensing control in Staphylococcus aureus | RNA biology | | 2013 | 746 | 537 | ||
| Comparison of DNA extraction methods in analysis of salivary bacterial communities | PloS one | | 2013 | 776 | 373 | ||
| Analysis of prophages harbored by the human-adapted subpopulation of Staphylococcus aureus CC398 | Infection, genetics and evolution | | 2013 | 647 | 713 | ||
| Effects of amoxicillin treatment on the salivary microbiota in children with acute otitis media | Clinical microbiology and infection | | 2013 | 728 | 367 | ||
| Blue light-mediated inactivation of Enterococcus faecalis in vitro | Photodiagnosis and photodynamic therapy | | 2013 | 676 | 9 | ||
| Daptomycin resistance mechanisms in clinically derived Staphylococcus aureus strains assessed by a combined transcriptomics and proteomics approach | The journal of antimicrobial chemotherapy | | 2011 | 650 | 0 | ||
| Molecular and epidemiological evaluation of strain replacement in patients previously harboring gentamicin-resistant MRSA | Journal of clinical microbiology | | 2011 | 546 | 0 | ||
| Methicillin-susceptible ST398 Staphylococcus aureus responsible for bloodstream infections: an emerging human-adapted subclone? | PloS one | | 2011 | 683 | 348 | ||
| Altered gut microbiota and endocannabinoid system tone in obese and diabetic leptin-resistant mice: impact on apelin regulation in adipose tissue | Frontiers in microbiology | | 2011 | 597 | 288 | ||
| The σB-dependent yabJ-spoVG operon is involved in the regulation of extracellular nuclease, lipase, and protease expression in Staphylococcus aureus | Journal of bacteriology | | 2011 | 612 | 0 | ||
| Responses of gut microbiota and glucose and lipid metabolism to prebiotics in genetic obese and diet-induced leptin-resistant mice | Diabetes | | 2011 | 684 | 0 | ||
| Screening for staphylococcal superantigen genes shows no correlation with the presence or the severity of chronic rhinosinusitis and nasal polyposis | PloS one | | 2010 | 733 | 320 | ||
| Comparison of two matrix-assisted laser desorption ionization-time of flight mass spectrometry methods with conventional phenotypic identification for routine identification of bacteria to the species level | Journal of clinical microbiology | | 2010 | 654 | 0 | ||
| Inactivation of the Ecs ABC transporter of Staphylococcus aureus attenuates virulence by altering composition and function of bacterial wall | PloS one | | 2010 | 633 | 366 |
