FL
Lisacek, Frédérique
Affiliation entities
Research groups
Title | Published in | Access level | OA Policy | Year | Views | Downloads | |
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Simulated digestions of free oligosaccharides and mucin-type O-glycans reveal a potential role for Clostridium perfringens | Scientific reports | 2024 | 72 | 37 | |||
Humanlectome, an update of unilectin for the annotation and prediction of human lectins | Nucleic acids research | 2024 | 52 | 24 | |||
What is a consistent glycan composition dataset? | Frontiers in analytical science | 2023 | 80 | 12 | |||
Protein glycosylation and glycoinformatics for novel biomarker discovery in neurodegenerative diseases | Ageing research reviews | 2023 | 46 | 61 | |||
Worldwide Glycoscience Informatics Infrastructure: The GlySpace Alliance | JACS Au | 2023 | 41 | 18 | |||
In silico analysis of the human milk oligosaccharide glycome reveals key enzymes of their biosynthesis | Scientific reports | 2022 | 39 | 14 | |||
The choanoflagellate pore-forming lectin SaroL-1 punches holes in cancer cells by targeting the tumor-related glycosphingolipid Gb3 | Communications biology | 2022 | 72 | 16 | |||
This is GlycoQL | Bioinformatics | 2022 | 62 | 35 | |||
Glycoinformatics in the Artificial Intelligence Era | Chemical reviews | 2022 | 60 | 56 | |||
The glycoconjugate ontology (GlycoCoO) for standardizing the annotation of glycoconjugate data and its application | Glycobiology | 2021 | 164 | 61 | |||
LectomeXplore, an update of UniLectin for the discovery of carbohydrate-binding proteins based on a new lectin classification | Nucleic acids research | 2021 | 139 | 72 | |||
Dealing with the Ambiguity of Glycan Substructure Search | Molecules | 2021 | 148 | 85 | |||
Structural Database for Lectins and the UniLectin Web Platform | Lectin Purification and Analysis | 2020 | 394 | 1 | |||
Can RNA-seq help in the diagnosis of diffuse large B-cell lymphoma? | 2020 | 51 | 2 | ||||
Examining and Fine-tuning the Selection of Glycan Compositions with GlyConnect Compozitor | Molecular & cellular proteomics | 2020 | 137 | 49 | |||
Norine: Update of the Nonribosomal Peptide Resource | Nucleic Acids Research | 2020 | 253 | 310 | |||
Structure and engineering of tandem repeat lectins | Current Opinion in Structural Biology | 2020 | 214 | 359 | |||
A pipeline to translate glycosaminoglycan sequences into 3D models. Application to the exploration of glycosaminoglycan conformational space | Glycobiology | 2019 | 274 | 143 | |||
Architecture and Evolution of Blade Assembly in β-propeller Lectins | Structure | 2019 | 275 | 0 | |||
GlyConnect: Glycoproteomics Goes Visual, Interactive, and Analytical | Journal of Proteome Research | 2019 | 269 | 0 | |||
UniLectin3D, a database of carbohydrate binding proteins with curated information on 3D structures and interacting ligands | Nucleic Acids Research | 2019 | 263 | 150 | |||
Sweet and Sour Ehrlichia: Glycoproteomics and Phosphoproteomics Reveal New Players in Ehrlichia ruminantium Physiology and Pathogenesis | Frontiers in Microbiology | 2019 | 221 | 131 | |||
A targeted proteomics approach reveals a serum protein signature as diagnostic biomarker for resectable gastric cancer | EBioMedicine | 2019 | 285 | 208 | |||
Updates to the Symbol Nomenclature for Glycans guidelines | Glycobiology | 2019 | 252 | 0 | |||
A Bioinformatics View of Glycan–Virus Interactions | Viruses | 2019 | 244 | 170 | |||
Towards a standardized bioinformatics infrastructure for N- and O-glycomics | Nature Communications | 2019 | 255 | 169 | |||
Understanding the glycome: an interactive view of glycosylation from glycocompositions to glycoepitopes | Glycobiology | 2018 | 254 | 1 | |||
Large-Scale Reanalysis of Publicly Available HeLa Cell Proteomics Data in the Context of the Human Proteome Project | Journal of Proteome Research | 2018 | 442 | 3 | |||
Glycomics@ExPASy: Bridging the Gap | Molecular and Cellular Proteomics | 2018 | 223 | 117 | |||
SugarSketcher: Quick and Intuitive Online Glycan Drawing | Molecules | 2018 | 289 | 165 | |||
Optimization by infusion of multiple reaction monitoring transitions for sensitive quantification of peptides by liquid chromatography/mass spectrometry | Rapid Communications in Mass Spectrometry | 2017 | 197 | 0 | |||
Glycoforest 1.0 | Analytical chemistry | 2017 | 219 | 0 | |||
Peptidomic and transcriptomic profiling of four distinct spider venoms | PLOS ONE | 2017 | 434 | 296 | |||
Databases and Associated Tools for Glycomics and Glycoproteomics | High-Throughput Glycomics and Glycoproteomics | 2017 | 143 | 0 | |||
GlycoSiteAlign: Glycosite Alignment Based on Glycan Structure | Journal of proteome research | 2016 | 147 | 0 | |||
SugarBindDB, a resource of glycan-mediated host–pathogen interactions | Nucleic acids research | 2016 | 122 | 29 | |||
Dedicated Software Enhancing Data-independent Acquisition Methods in Mass Spectrometry | Chimia | 2016 | 186 | 102 | |||
MzJava: An open source library for mass spectrometry data processing | Journal of proteomics | 2015 | 111 | 35 | |||
Property Graph vs RDF Triple Store: A Comparison on Glycan Substructure Search | PloS one | 2015 | 110 | 53 | |||
Toolboxes for a standardised and systematic study of glycans | BMC bioinformatics | 2014 | 111 | 33 | |||
Fifteen years SIB Swiss Institute of Bioinformatics: life science databases, tools and support | Nucleic acids research | 2014 | 871 | 26 | |||
UniCarbKB: building a knowledge platform for glycoproteomics | Nucleic acids research | 2014 | 112 | 78 | |||
GlycoDigest: a tool for the targeted use of exoglycosidase digestions in glycan structure determination | Bioinformatics | 2014 | 177 | 1 | |||
Clustering and Filtering Tandem Mass Spectra Acquired in Data-Independent Mode | Journal of the American Society for Mass Spectrometry | 2013 | 746 | 272 | |||
EasyProt - An easy-to-use graphical platform for proteomics data analysis | Journal of proteomics | 2013 | 741 | 8 | |||
Glycans, the forgotten biomolecular actors of the big picture | EMBnet.journal | 2012 | 164 | 0 | |||
pROC: an open-source package for R and S+ to analyze and compare ROC curves | BMC bioinformatics | 2011 | 1,201 | 434 | |||
Human hemolysate glycated proteome | Analytical chemistry | 2011 | 592 | 1 | |||
A multiparameter panel method for outcome prediction following aneurysmal subarachnoid hemorrhage | Intensive care medicine | 2010 | 1,064 | 424 | |||
Glycation isotopic labeling with 13C-reducing sugars for quantitative analysis of glycated proteins in human plasma | Molecular & cellular proteomics | 2010 | 534 | 0 | |||
Early activation of the fatty acid metabolism pathway by chronic high glucose exposure in rat insulin secretory beta-cells | Proteomics | 2010 | 592 | 0 | |||
Bioinformatics for protein biomarker panel classification: what is needed to bring biomarker panels into in vitro diagnostics? | Expert review of proteomics | 2009 | 651 | 572 | |||
X-Rank: a robust algorithm for small molecule identification using tandem mass spectrometry | Analytical chemistry | 2009 | 628 | 0 | |||
A combined CXCL10, CXCL8 and H-FABP panel for the staging of human African trypanosomiasis patients | PLoS neglected tropical diseases | 2009 | 670 | 591 | |||
SwissPIT: An workflow-based platform for analyzing tandem-MS spectra using the Grid | Proteomics | 2009 | 637 | 0 | |||
The World-2DPAGE Constellation to promote and publish gel-based proteomics data through the ExPASy server | Journal of proteomics | 2008 | 520 | 0 | |||
MIAPEGelDB, a web-based submission tool and public repository for MIAPE gel electrophoresis documents | Journal of proteomics | 2008 | 659 | 0 | |||
PICarver: a software tool and strategy for peptides isoelectric focusing | Journal of proteome research | 2008 | 569 | 0 | |||
A suite of tools to analyse and publish 2-DE data | Proteomics | 2008 | 593 | 3 | |||
swissPIT: a novel approach for pipelined analysis of mass spectrometry data | Bioinformatics | 2008 | 624 | 9 | |||
Using bioinformatic resources in the proteomic analysis of biological fluids | Proteomics - Clinical Applications | 2007 | 401 | 1 | |||
Assignment of protein function and discovery of novel nucleolar proteins based on automatic analysis of MEDLINE | Proteomics | 2007 | 617 | 0 | |||
Data integration in Proteomics | Proteome research: concepts, technology and applications | 2007 | 538 | 0 | |||
Deciphering the human nucleolar proteome | Mass spectrometry reviews | 2006 | 768 | 0 |