Nunes, Jose Manuel

 
 
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2019

Scientific Articles

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High-resolution HLA phased haplotype frequencies to predict the success of unrelated donor searches and clinical outcome following hematopoietic stem cell transplantationBuhler, Stéphane; Baldomero, Helen; Ferrari-Lacraz, Sylvie; Nunes, Jose Manuel; ... Villard, Jean

2018

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Deciphering the fine nucleotide diversity of full HLA class I and class II genes in a well-documented population from sub-Saharan AfricaGoeury, Thomas; Creary, L E; Brunet, Lydie; Galan, M; ... Sanchez-Mazas, Alicia
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Genetic history of the African Sahelian populationsČerný, V; Kulichová, I; Poloni, Estella S.; Nunes, Jose Manuel; ... Sanchez-Mazas, Alicia
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Mandenka from Senegal: Next Generation Sequencing typings reveal very high frequencies of particular HLA class II alleles and haplotypesGoeury, Thomas; Creary, L E; Fernandez-Vina, M A; Tiercy, Jean-Marie; ... Sanchez-Mazas, Alicia

2017

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Common and well-documented HLA alleles over all of Europe and within European sub-regions: A catalogue from the European Federation for ImmunogeneticsSanchez-Mazas, Alicia; Nunes, Jose Manuel; Middleton, D; Sauter, J; ... Fleischhauer, K
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The HLA-A, -B and -DRB1 polymorphism in a large dataset of South Brazil bone marrow donors from Rio Grande do SulBoquett, J A; Nunes, Jose Manuel; Buhler, Stéphane; de Oliveira, M Z; ... Sanchez-Mazas, Alicia
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The HLA-B landscape of Africa: Signatures of pathogen-driven selection and molecular identification of candidate alleles to malaria protectionSanchez-Mazas, Alicia; Černý, Viktor; Di, Da; Buhler, Stéphane; ... Nunes, Jose Manuel

2016

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HLA class I molecular variation and peptide-binding properties suggest a model of joint divergent asymmetric selectionBuhler, Stéphane; Nunes, Jose Manuel; Sanchez-Mazas, Alicia;
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Mapping the HLA diversity of the Iberian PeninsulaRomòn, Iñigo; Montes, Carmen; Ligeiro, Dario; Trindade, Hélder; ... Buhler, Stéphane

2015

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Correction to: "Forward-in-Time, Spatially Explicit Modeling Software to Simulate Genetic Lineages Under Selection"Currat, Mathias; Gerbault, Pascale; Di, Da; Nunes, Jose Manuel; Sanchez-Mazas, Alicia
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Forward-in-Time, Spatially Explicit Modeling Software to Simulate Genetic Lineages Under SelectionCurrat, Mathias; Gerbault, Pascale; Di, Da; Nunes, Jose Manuel; Sanchez-Mazas, Alicia
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HLA genetic diversity in Hungarians and Hungarian Gypsies: complementary differentiation patterns and demographic signals revealed by HLA-A, -B and -DRB1 in Central EuropeInotai, D.; Szilvasi, A.; Benko, S.; Boros-Major, A.; ... Tordai, A.
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HLA supertype variation across populations: new insights into the role of natural selection in the evolution of HLA-A and HLA-B polymorphismsDos Santos Francisco, Rodrigo; Buhler, Stéphane; Nunes, Jose Manuel; Bitarello, Bárbara Domingues; ... Sanchez-Mazas, Alicia
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HLA-A, B and DRB1 genetic heterogeneity in QuebecBuhler, Stéphane; Nunes, Jose Manuel; Sanchez-Mazas, Alicia; Richard, L.;
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HLA-A-B-C-DRB1-DQB1 phased haplotypes in 124 Nigerian families indicate extreme HLA diversity and low linkage disequilibrium in Central-West AfricaTesti, M; Battarra, M; Lucarelli, G; Isgro, A; ... Sanchez-Mazas, Alicia

2014

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HLA-DRB1 and HLA-DQB1 allele associations in an Albanian patient population with rheumatoid arthritis: correlations with the specific autoantibody markers and inter-population DRB1 allele frequency variabilityPrifti-Kurti, Margarita; Nunes, Jose Manuel; Shyti, Erkena; Ylli, Zamira; ... Sulcebe, Genc
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NO to obsolete definitions: YES to blanksNunes, Jose Manuel; Buhler, Stéphane; Sanchez-Mazas, Alicia;
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Resolution of HLA-B*44:02:01G, -DRB1*14:01:01G and -DQB1*03:01:01G reveals a high allelic variability among 12 European populationsVidan-Jeras, B.; Buhler, Stéphane; Dubois, V.; Grubic, Z.; ... Tiercy, Jean-Marie
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The HLA-net GENE[RATE] pipeline for effective HLA data analysis and its application to 145 population samples from Europe and neighbouring areasNunes, Jose Manuel; Buhler, Stéphane; Roessli, David; Sanchez-Mazas, Alicia;

2013

Scientific Articles

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16th IHIW: Analysis of HLA Population Data, with updated results for 1996 to 2012 workshop data (AHPD project report)Riccio, Maria Eugenia; Buhler, Stéphane; Nunes, Jose Manuel; Vangenot, Christelle; ... Sanchez-Mazas, Alicia
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A New HLA Map of Europe: Regional Genetic Variation and Its Implication for Peopling History, Disease-Association Studies and Tissue TransplantationSanchez-Mazas, Alicia; Buhler, Stéphane; Nunes, Jose Manuel;
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Haplotype diversity generated by ancient recombination-like events in the MHC of Indian rhesus macaquesDoxiadis, Gaby G M; de Groot, Nanine; Otting, Nel; de Vos-Rouweler, Annemiek J M; ... Bontrop, Ronald E
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The distribution of MICA alleles in an Austrian population: evidence for increasing polymorphismWenda, Sabine; Faé, Ingrid; Sanchez-Mazas, Alicia; Nunes, Jose Manuel; ... Fischer, Gottfried F

2012

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Strategies to work with HLA data in human populations for histocompatibility, clinical transplantation, epidemiology and population genetics: HLA-NET methodological recommendationsSanchez-Mazas, Alicia; Vidan-Jeras, B.; Nunes, Jose Manuel; Fischer, G.; ... Tiercy, Jean-Marie
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The Heterogeneous HLA Genetic Makeup of the Swiss PopulationBuhler, Stéphane; Nunes, Jose Manuel; Nicoloso, Grazia; Tiercy, Jean-Marie; Sanchez-Mazas, Alicia

2011

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Allele frequency estimation from ambiguous data : using resampling schema in validating frequency estimates and in selective neutrality testingNunes, Jose Manuel; Riccio, Maria Eugenia; Tiercy, Jean-Marie; Sanchez-Mazas, Alicia;
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The Austroasiatic Munda Population from India and its Enigmatic Origin: A HLA Diversity StudyRiccio, Maria Eugenia; Nunes, Jose Manuel; Rahal, Melissa; Kervaire, Barbara Nelly; Tiercy, Jean-Marie

2010

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Analysis of the HLA population data (AHPD) submitted to the 15th International Histocompatibility/Immunogenetics Workshop by using the Gene[rate] computer tools accommodating ambiguous data (AHPD project report)Nunes, Jose Manuel; Riccio, Maria Eugenia; Buhler, Stéphane; Di, Da; ... Sanchez-Mazas, Alicia

2007

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Tools for analysing ambiguous HLA dataNunes, Jose Manuel;
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