Dermitzakis, Emmanouil

 
 
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2015

Scientific Articles

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Alternative Splicing QTLs in European and African PopulationsOngen, Halit; Dermitzakis, Emmanouil;
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Assessing allele-specific expression across multiple tissues from RNA-seq read dataPirinen, Matti; Lappalainen, Tuuli Emilia; Zaitlen, Noah A; Dermitzakis, Emmanouil; ... Rivas, Manuel A
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Biased allelic expression in human primary fibroblast single cellsBorel, Christelle; Ferreira Marinheiro, Pedro; Santoni, Federico; Delaneau, Olivier; ... Antonarakis, Stylianos
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Gene-gene and gene-environment interactions detected by transcriptome sequence analysis in twinsBuil Demur, Alfonso Alberto; Brown, Andrew Anand; Lappalainen, Tuuli Emilia; Viñuela, Ana; ... Dermitzakis, Emmanouil
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Human genomics. Effect of predicted protein-truncating genetic variants on the human transcriptomeRivas, Manuel A; Pirinen, Matti; Conrad, Donald F; Lek, Monkol; ... Antonarakis, Stylianos
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Human genomics. The Genotype-Tissue Expression (GTEx) pilot analysis: multitissue gene regulation in humansDermitzakis, Emmanouil;
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Human genomics. The human transcriptome across tissues and individualsMelé, Marta; Ferreira, Pedro G; Reverter, Ferran; DeLuca, David S; ... Guigó, Roderic
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Impaired Cell Cycle Regulation in a Natural Equine Model of AsthmaPacholewska, Alicja; Jagannathan, Vidhya; Drögemüller, Michaela; Klukowska-Rötzler, Jolanta; ... Gerber, Vincent
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Integrated analysis of mRNA and miRNA expression in response to interleukin-6 in hepatocytesLukowski, Samuel; Fish, Richard; Martin-Levilain, Juliette; Gonelle-Gispert, Carmen; ... Neerman Arbez, Marguerite
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Integrated analysis of mRNA and miRNA expression in response to interleukin-6 in hepatocytesLukowski, Samuel; Fish, Richard; Martin-Levilain, Juliette; Gonelle-Gispert, Carmen; ... Neerman Arbez, Marguerite
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Population Variation and Genetic Control of Modular Chromatin Architecture in HumansWaszak, Sebastian M; Delaneau, Olivier; Gschwind, Andreas R; Kilpinen, Leena Helena; ... Dermitzakis, Emmanouil
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Quantitative variability of 342 plasma proteins in a human twin populationLiu, Yansheng; Buil Demur, Alfonso Alberto; Collins, Ben C; Gillet, Ludovic C J; ... Aebersold, Ruedi
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Short Term Exposure of Beta Cells to Low Concentrations of Interleukin-1β Improves Insulin Secretion through Focal Adhesion and Actin Remodeling and Regulation of Gene ExpressionArous, Caroline; Ferreira, Pedro G; Dermitzakis, Emmanouil; Halban, Philippe A.;
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Synchronized age-related gene expression changes across multiple tissues in human and the link to complex diseasesYang, Jialiang; Huang, Tao; Petralia, Francesca; Long, Quan; ... Dermitzakis, Emmanouil
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The transcriptome of equine peripheral blood mononuclear cellsPacholewska, Alicja; Drögemüller, Michaela; Klukowska-Rötzler, Jolanta; Lanz, Simone; ... Jagannathan, Vidhya
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Tissue-specific effects of genetic and epigenetic variation on gene regulation and splicingGutierrez Arcelus, Maria; Ongen, Halit; Lappalainen, Tuuli Emilia; Montgomery, Stephen; ... Dermitzakis, Emmanouil
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Transcript Expression Data from Human Islets Links Regulatory Signals from Genome-Wide Association Studies for Type 2 Diabetes and Glycemic Traits to Their Downstream Effectorsvan de Bunt, Martijn; Manning Fox, Jocelyn E; Dai, Xiaoqing; Barrett, Amy; ... Gloyn, Anna L

Thesis supervisions

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Long-range and temporal aspects of the genetics of gene expressionBryois, Julien;

2014

Scientific Articles

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Allelic mapping bias in RNA-sequencing is not a major confounder in eQTL studiesPanousis, Nikolaos; Gutierrez Arcelus, Maria; Dermitzakis, Emmanouil; Lappalainen, Tuuli Emilia;
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Cigarette smoking reduces DNA methylation levels at multiple genomic loci but the effect is partially reversible upon cessationTsaprouni, Loukia G; Yang, Tsun-Po; Bell, Jordana; Dick, Katherine J; ... Deloukas, Panos
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Cis and trans effects of human genomic variants on gene expressionBryois, Julien; Buil Demur, Alfonso Alberto; Evans, David M; Kemp, John P; ... Dermitzakis, Emmanouil
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Fractalkine (CX3CL1), a new factor protecting β-cells against TNFαRutti Roch, Sabine; Arous, Caroline; Schvartz, Domitille; Timper, Katharina; ... Bouzakri, Karim
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Gene Age Predicts the Strength of Purifying Selection Acting on Gene Expression Variation in HumansPopadin, Konstantin; Gutierrez Arcelus, Maria; Lappalainen, Tuuli Emilia; Buil Demur, Alfonso Alberto; ... Antonarakis, Stylianos
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Genetic interactions affecting human gene expression identified by variance association mappingBrown, Andrew Anand; Buil Demur, Alfonso Alberto; Viñuela, Ana; Lappalainen, Tuuli Emilia; ... Durbin, Richard
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High risk population isolate reveals low frequency variants predisposing to intracranial aneurysmsKurki, Mitja I; Gaál, Emília Ilona; Kettunen, Johannes; Lappalainen, Tuuli Emilia; ... Jääskeläinen, Juha E
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Identification and removal of low-complexity sites in allele-specific analysis of ChIP-seq dataWaszak, Sebastian M; Kilpinen, Leena Helena; Gschwind, Andreas R; Orioli, Andrea; ... Deplancke, Bart
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Putative cis-regulatory drivers in colorectal cancerOngen, Halit; Andersen, Claus L; Bramsen, Jesper B; Oster, Bodil; ... Dermitzakis, Emmanouil
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Tandem RNA chimeras contribute to transcriptome diversity in human population and are associated with intronic genetic variantsGreger, Liliana; Su, Jing; Rung, Johan; Ferreira Marinheiro, Pedro; ... Brazma, Alvis
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Whole exome sequencing of a dominant retinitis pigmentosa family identifies a novel deletion in PRPF31Villanueva, Adda; Willer, Jason R; Bryois, Julien; Dermitzakis, Emmanouil; ... Davis, Erica E

Thesis supervisions

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Mechanisms and tissue specificity of the genetic and epigenetic variation in gene regulationGutierrez Arcelus, Maria;

2013

Scientific Articles

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Cell-type, allelic and genetic signatures in the human pancreatic beta cell transcriptomeNica, Alexandra; Ongen, Halit; Irminger, Jean-Claude; Bosco, Domenico; ... Dermitzakis, Emmanouil
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Congruence of Additive and Non-Additive Effects on Gene Expression Estimated from Pedigree and SNP DataPowell, Joseph E.; Henders, Anjali K.; McRae, Allan F.; Kim, Jinhee; ... Visscher, Peter M.
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Coordinated effects of sequence variation on DNA binding, chromatin structure, and transcriptionKilpinen, Leena Helena; Waszak, Sebastian M; Gschwind, Andreas R; Raghav, Sunil K; ... Dermitzakis, Emmanouil
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Examination of the relationship between variation at 17q21 and childhood wheeze phenotypesGranell, Raquel; Henderson, A. John; Timpson, Nicholas; St. Pourcain, Beate; ... Sterne, Jonathan A.C.
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Expression quantitative trait loci: present and futureNica, Alexandra; Dermitzakis, Emmanouil;
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Gene expression changes with age in skin, adipose tissue, blood and brainGlass, Daniel; Viñuela, Ana; Davies, Matthew N; Ramasamy, Adaikalavan; ... Spector, Tim D
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Genetic and epigenetic regulation of human lincRNA gene expressionPopadin, Konstantin; Gutierrez Arcelus, Maria; Dermitzakis, Emmanouil; Antonarakis, Stylianos;
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Immune response is a personal matterFerreira Marinheiro, Pedro; Dermitzakis, Emmanouil;
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Integrative annotation of variants from 1092 humans: application to cancer genomicsLappalainen, Tuuli Emilia; Dermitzakis, Emmanouil;
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