Gavin Perrin, Anne-Claude

 
 
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2021

Scientific Articles

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CLICK-enabled analogues reveal pregnenolone interactomes in cancer and immune cellsRoy, Sougata; Sipthorp, James; Mahata, Bidesh; Pramanik, Jhuma; ... Teichmann, Sarah A.

2020

Scientific Articles

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Dynamic buffering of extracellular chemokine by a dedicated scavenger pathway enables robust adaptation during directed tissue migrationWong, Mie; Newton, Lionel R.; Hartmann, Jonas; Hennrich, Marco L.; ... Gilmour, Darren
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Glycogen accumulation, central carbon metabolism, and aging of hematopoietic stem and progenitor cellsPoisa-Beiro, Laura; Thoma, Judith; Landry, Jonathan; Sauer, Sven; ... Ho, Anthony D.
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Structural insights and activating mutations in diverse pathologies define mechanisms of deregulation for phospholipase C gamma enzymesLiu, Yang; Bunney, Tom D.; Khosa, Sakshi; Macé, Kévin; ... Katan, Matilda
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Structures of three MORN repeat proteins and a re-evaluation of the proposed lipid-binding properties of MORN repeatsSajko, Sara; Grishkovskaya, Irina; Kostan, Julius; Graewert, Melissa; ... Djinovic-Carugo, Kristina

2018

Scientific Articles

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Cell metabolism regulates integrin mechanosensing via an SLC3A2-dependent sphingolipid biosynthesis pathwayBoulter, Etienne; Estrach, Soline; Tissot, Floriane S; Hennrich, Marco L; ... Féral, Chloé C
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Cell-specific proteome analyses of human bone marrow reveal molecular features of age-dependent functional declineHennrich, Marco L; Romanov, Natalie; Horn, Patrick; Jaeger, Samira; ... Ho, Anthony D
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Effects of acetylation and phosphorylation on subunit interactions in three large eukaryotic complexesŠoštarić, Nikolina; O'Reilly, Francis J; Giansanti, Piero; Heck, Albert J R; ... van Noort, Vera
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Enzymatic complexes across scalesKastritis, Panagiotis L; Gavin Perrin, Anne-Claude;
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Impact of spliceosome mutations on RNA splicing in myelodysplasia: dysregulated genes/pathways and clinical associationsPellagatti, Andrea; Armstrong, Richard N; Steeples, Violetta; Sharma, Eshita; ... Boultwood, Jacqueline

2017

Scientific Articles

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Capturing protein communities by structural proteomics in a thermophilic eukaryoteKastritis, Panagiotis L; O'Reilly, Francis J; Bock, Thomas; Li, Yuanyue; ... Gavin Perrin, Anne-Claude
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Structural and functional dissection of the DH and PH domains of oncogenic Bcr-Abl tyrosine kinaseReckel, Sina; Gehin, Charlotte; Tardivon, Delphine; Georgeon, Sandrine; ... Hantschel, Oliver
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Systematic identification of phosphorylation-mediated protein interaction switchesBetts, Matthew J; Wichmann, Oliver; Utz, Mathias; Andre, Timon; ... Russell, Robert B

2016

Scientific Articles

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A protocol for the systematic and quantitative measurement of protein-lipid interactions using the liposome-microarray-based assaySaliba, Antoine-Emmanuel; Vonkova, Ivana; Deghou, Samy; Ceschia, Stefano; ... Gavin Perrin, Anne-Claude
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Bifunctional sphingosine for cell-based analysis of protein-sphingolipid interactionsHaberkant, Per; Stein, Frank; Höglinger, Doris; Gerl, Mathias J; ... Schultz, Carsten
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Integration of multi-omics data of a genome-reduced bacterium: Prevalence of post-transcriptional regulation and its correlation with protein abundancesChen, Wei-Hua; van Noort, Vera; Lluch-Senar, Maria; Hennrich, Marco L; ... Bork, Peer
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PRL-3 disrupts epithelial architecture by altering the post-mitotic midbody positionLuján, Pablo; Varsano, Giulia; Rubio, Teresa; Hennrich, Marco L; ... Köhn, Maja
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Quantitative human cell encyclopediaAndrews, Brenda J.; Walhout, A. J. Marian; Iyengar, Ravi; Gavin Perrin, Anne-Claude;
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The orchestra of lipid-transfer proteins at the crossroads between metabolism and signalingChiapparino, Antonella; Maeda, Kenji; Turei, Denes; Saez-Rodriguez, Julio; Gavin Perrin, Anne-Claude

2015

Scientific Articles

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Defining a minimal cell: essentiality of small ORFs and ncRNAs in a genome-reduced bacteriumLluch‐Senar, Maria; Delgado, Javier; Chen, Wei‐Hua; Lloréns‐Rico, Verónica; ... Gavin Perrin, Anne-Claude
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Lipid cooperativity as a general membrane-recruitment principle for PH domainsVonkova, Ivana; Saliba, Antoine-Emmanuel; Deghou, Samy; Anand, Kanchan; ... Gavin Perrin, Anne-Claude
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Mechismo: predicting the mechanistic impact of mutations and modifications on molecular interactionsBetts, Matthew J.; Lu, Qianhao; Jiang, YingYing; Drusko, Armin; ... Russell, Robert B.
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Quantitative mass spectrometry of posttranslational modifications: keys to confidenceHennrich, Marco Leo; Gavin Perrin, Anne-Claude;
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Structure of the Kti11/Kti13 heterodimer and its double role in modifications of tRNA and eukaryotic elongation factor 2Glatt, Sebastian; Zabel, Rene; Vonkova, Ivana; Kumar, Amit; ... Müller, Christoph W.
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The deca-GX3 proteins Yae1-Lto1 function as adaptors recruiting the ABC protein Rli1 for iron-sulfur cluster insertionPaul, Viktoria Désirée; Mühlenhoff, Ulrich; Stümpfig, Martin; Seebacher, Jan; ... Lill, Roland
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The systematic analysis of protein–lipid interactions comes of ageSaliba, Antoine-Emmanuel; Vonkova, Ivana; Gavin Perrin, Anne-Claude;

2014

Scientific Articles

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A generic protocol for the purification and characterization of water-soluble complexes of affinity-tagged proteins and lipidsMaeda, Kenji; Poletto, Mattia; Chiapparino, Antonella; Gavin Perrin, Anne-Claude;
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A quantitative liposome microarray to systematically characterize protein-lipid interactionsSaliba, Antoine-Emmanuel; Vonkova, Ivana; Ceschia, Stefano; Findlay, Greg M; ... Gavin Perrin, Anne-Claude
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An integrated approach for genome annotation of the eukaryotic thermophile Chaetomium thermophilumBock, Thomas; Chen, Wei-Hua; Ori, Alessandro; Malik, Nayab; ... Bork, Peer
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Modules, networks and systems medicine for understanding disease and aiding diagnosisGustafsson, Mika; Nestor, Colm E; Zhang, Huan; Barabási, Albert-László; ... Benson, Mikael

2013

Scientific Articles

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Characterization of drug‐induced transcriptional modules: towards drug repositioning and functional understandingIskar, Murat; Zeller, Georg; Blattmann, Peter; Campillos, Monica; ... Bork, Peer
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Detection and characterization of protein interactions in vivo by a simple live-cell imaging methodGallego, Oriol; Specht, Tanja; Brach, Thorsten; Kumar, Arun; ... Kaksonen, Marko
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In vivo profiling and visualization of cellular protein-lipid interactions using bifunctional fatty acidsHaberkant, Per; Raijmakers, Reinout; Wildwater, Marjolein; Sachsenheimer, Timo; ... Holthuis, Joost C. M.
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Network Biology editorial 2013Marcotte, Edward; Boone, Charles; Babu, M. Madan; Gavin Perrin, Anne-Claude;
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Structural and functional characterization of a phosphatase domain within yeast general transcription factor IIICTaylor, Nicholas M.I.; Glatt, Sebastian; Hennrich, Marco L.; von Scheven, Gudrun; ... Müller, Christoph W.
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Systematic identification of proteins that elicit drug side effectsKuhn, Michael; Al Banchaabouchi, Mumna; Campillos, Monica; Jensen, Lars Juhl; ... Bork, Peer

2012

Scientific Articles

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Cell type–specific chromatin immunoprecipitation from multicellular complex samples using BiTS-ChIPBonn, Stefan; Zinzen, Robert P; Perez-Gonzalez, Alexis; Riddell, Andrew; ... Furlong, Eileen E M
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Cross‐talk between phosphorylation and lysine acetylation in a genome‐reduced bacteriumvan Noort, Vera; Seebacher, Jan; Bader, Samuel; Mohammed, Shabaz; ... Gavin Perrin, Anne-Claude
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Deciphering a global network of functionally associated post‐translational modificationsMinguez, Pablo; Parca, Luca; Diella, Francesca; Mende, Daniel R; ... Bork, Peer
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Structural analyses of the Slm1-PH domain demonstrate ligand binding in the non-canonical siteAnand, Kanchan; Maeda, Kenji; Gavin Perrin, Anne-Claude;
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Transcription start site associated RNAs in bacteriaYus, Eva; Güell, Marc; Vivancos, Ana P; Chen, Wei‐Hua; ... Serrano, Luis

2011

Scientific Articles

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Mass spectrometry reveals stable modules in holo and apo RNA polymerases I and IIILane, Laura A.; Fernández-Tornero, Carlos; Zhou, Min; Morgner, Nina; ... Robinson, Carol V.
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Quantification of mRNA and protein and integration with protein turnover in a bacteriumMaier, Tobias; Schmidt, Alexander; Güell, Marc; Kühner, Sebastian; ... Serrano, Luis
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Recent advances in charting protein–protein interaction: mass spectrometry-based approachesGavin Perrin, Anne-Claude; Maeda, Kenji; Kühner, Sebastian;
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Snapshot: protein-protein interaction networksSeebacher, Jan; Gavin Perrin, Anne-Claude;

2010

Scientific Articles

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3rd US-EU workshop: systems level understanding of DNA damage responsesSander, Miriam; Begley, Thomas J.; Desaintes, Christian; Gavin Perrin, Anne-Claude; ... Mullenders, Leon
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A systematic screen for protein–lipid interactions in Saccharomyces cerevisiaeGallego, Oriol; Betts, Matthew J; Gvozdenovic‐Jeremic, Jelena; Maeda, Kenji; ... Gavin Perrin, Anne-Claude
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Visualization of omics data for systems biologyGehlenborg, Nils; O'Donoghue, Seán I; Baliga, Nitin S; Goesmann, Alexander; ... Gavin Perrin, Anne-Claude
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Visualizing biological data—now and in the futureO'Donoghue, Seán I; Gavin Perrin, Anne-Claude; Gehlenborg, Nils; Goodsell, David S; ... Wong, Bang
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